RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 ZHX3Q9H4I2 956 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 CCDC181Q5TID7 509 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-221ENST00000529873 SSR1P43307 286 aaKnown RBP9.97□□□□□ -0.81
CTNND1-221ENST00000529873 PPP1R1BQ9UD71 204 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-221ENST00000529873 PLEKHH1Q9ULM0 1364 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 KIAA0754O94854 1291 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 XPCQ01831 940 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-221ENST00000529873 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 NSD2O96028 1365 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 HMGN5P82970 282 aaKnown RBP9.97□□□□□ -0.81
CTNND1-221ENST00000529873 NUP62CLQ9H1M0 184 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 IL1RAPL2Q9NP60 686 aa9.97□□□□□ -0.81
CTNND1-221ENST00000529873 MX1P20591 662 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 ZNF76P36508 570 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 SKIDA1Q1XH10 827 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 IQCEQ6IPM2 695 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 MYD88Q99836 296 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 GRPEL1Q9HAV7 217 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-221ENST00000529873 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.81
CTNND1-221ENST00000529873 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.81
CTNND1-221ENST00000529873 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
CTNND1-221ENST00000529873 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
CTNND1-221ENST00000529873 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
CTNND1-221ENST00000529873 MCM10Q7L590 875 aa9.96□□□□□ -0.82
CTNND1-221ENST00000529873 GOLGA6L10A6NI86 522 aa9.96□□□□□ -0.82
CTNND1-221ENST00000529873 ZSCAN29Q8IWY8 852 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
CTNND1-221ENST00000529873 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-221ENST00000529873 PSMD1Q99460 953 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 ITSN2Q9NZM3 1697 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 CLGNO14967 610 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 CAVIN4Q5BKX8 364 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
CTNND1-221ENST00000529873 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
CTNND1-221ENST00000529873 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■■■■□ 22.1
CTNND1-221ENST00000529873 MIS18AQ9NYP9 233 aa9.95□□□□□ -0.82
CTNND1-221ENST00000529873 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
CTNND1-221ENST00000529873 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
CTNND1-221ENST00000529873 ZPR1O75312 459 aa9.94□□□□□ -0.82
CTNND1-221ENST00000529873 GLRX3O76003 335 aaKnown RBP9.94□□□□□ -0.82
CTNND1-221ENST00000529873 ZC3H6P61129 1189 aaKnown RBP9.94□□□□□ -0.82
CTNND1-221ENST00000529873 WAPLQ7Z5K2 1190 aa9.94□□□□□ -0.82
CTNND1-221ENST00000529873 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-221ENST00000529873 USP5P45974 858 aa9.94□□□□□ -0.82
CTNND1-221ENST00000529873 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
CTNND1-221ENST00000529873 ERLIN1O75477 346 aa9.94□□□□□ -0.82
CTNND1-221ENST00000529873 PTPRCP08575 1304 aa9.94□□□□□ -0.82
CTNND1-221ENST00000529873 SLC5A1P13866 664 aa9.93□□□□□ -0.82
CTNND1-221ENST00000529873 DESP17661 470 aa9.93□□□□□ -0.82
CTNND1-221ENST00000529873 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
CTNND1-221ENST00000529873 SEPT11Q9NVA2 429 aaKnown RBP9.93□□□□□ -0.82
CTNND1-221ENST00000529873 TNIP1Q15025 636 aa9.93□□□□□ -0.82
CTNND1-221ENST00000529873 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
CTNND1-221ENST00000529873 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-221ENST00000529873 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
CTNND1-221ENST00000529873 TTC21BQ7Z4L5 1316 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC112Q8NEF3 446 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 ZNF397Q8NF99 534 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 PHAXQ9H814 394 aaKnown RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 EZRP15311 586 aaKnown RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 NOS1P29475 1434 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 RARSP54136 660 aaKnown RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 SEPT7Q16181 437 aaKnown RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 JAKMIP3Q5VZ66 844 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 SSBP05455 408 aaKnown RBP eCLIP9.92□□□□□ -0.821e-7■■■■■ 26.8
CTNND1-221ENST00000529873 NME9Q86XW9 330 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC184Q52MB2 194 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-221ENST00000529873 EXOC6BQ9Y2D4 811 aa9.92□□□□□ -0.82
CTNND1-221ENST00000529873 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
CTNND1-221ENST00000529873 SH2B1Q9NRF2 756 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-221ENST00000529873 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
CTNND1-221ENST00000529873 PIBF1Q8WXW3 757 aa9.91□□□□□ -0.82
CTNND1-221ENST00000529873 TSG101Q99816 390 aa9.91□□□□□ -0.82
CTNND1-221ENST00000529873 DENND4BO75064 1496 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-221ENST00000529873 BCCIPQ9P287 314 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■■■□ 21.2
CTNND1-221ENST00000529873 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-221ENST00000529873 FANCAO15360 1455 aa9.91□□□□□ -0.82
CTNND1-221ENST00000529873 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
CTNND1-221ENST00000529873 KIAA1328Q86T90 577 aa9.91□□□□□ -0.82
CTNND1-221ENST00000529873 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
CTNND1-221ENST00000529873 DHX29Q7Z478 1369 aaKnown RBP9.9□□□□□ -0.82
CTNND1-221ENST00000529873 ANKRD18BA2A2Z9 1011 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 SSRP1Q08945 709 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms