RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ZCRB1Q8TBF4 217 aaKnown RBP5.02□□□□□ -1.61
PTPRC-213ENST00000529828 IP6K1Q92551 441 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 MAP3K19Q56UN5 1328 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 IGSF1Q8N6C5 1336 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 LY75O60449 1722 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 ATN1P54259 1190 aaPredicted RBP5.02□□□□□ -1.61
PTPRC-213ENST00000529828 USP54Q70EL1 1684 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 EDC4Q6P2E9 1401 aaKnown RBP5.01□□□□□ -1.61
PTPRC-213ENST00000529828 FAM208AQ9UK61 1670 aaKnown RBP5.01□□□□□ -1.61
PTPRC-213ENST00000529828 HOXC9P31274 260 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 AMPHP49418 695 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 RRS1Q15050 365 aaKnown RBP5.01□□□□□ -1.61
PTPRC-213ENST00000529828 PALLDQ8WX93 1383 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 TIE1P35590 1138 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 MPRIPQ6WCQ1 1025 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 CARD11Q9BXL7 1154 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 CD2APQ9Y5K6 639 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 RGPD2P0DJD1 1756 aa5.01□□□□□ -1.61
PTPRC-213ENST00000529828 C5P01031 1676 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 KIF3CO14782 793 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 NBPF6Q5VWK0 638 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 AK7Q96M32 723 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 NBPF4Q96M43 638 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 SEC24BO95487 1268 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 HTRA3P83110 453 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 COG3Q96JB2 828 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 TERF2IPQ9NYB0 399 aa5□□□□□ -1.61
PTPRC-213ENST00000529828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.99□□□□□ -1.61
PTPRC-213ENST00000529828 MNX1P50219 401 aaPredicted RBP4.99□□□□□ -1.61
PTPRC-213ENST00000529828 MMRN1Q13201 1228 aa4.99□□□□□ -1.61
PTPRC-213ENST00000529828 RAPGEF4Q8WZA2 1011 aa4.99□□□□□ -1.61
PTPRC-213ENST00000529828 TOGARAM1Q9Y4F4 1720 aa4.99□□□□□ -1.61
PTPRC-213ENST00000529828 TATP17735 454 aaPredicted RBP4.98□□□□□ -1.61
PTPRC-213ENST00000529828 GGNBP2Q9H3C7 697 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 C4BP0C0L5 1744 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 CYP27B1O15528 508 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 IER5LQ5T953 404 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 LINC00116Q8NCU8 138 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 FLAD1Q8NFF5 587 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 NMRK2Q9NPI5 230 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 PCDH11XQ9BZA7 1347 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 PCDH11YQ9BZA8 1340 aa4.98□□□□□ -1.61
PTPRC-213ENST00000529828 SMG6Q86US8 1419 aaKnown RBP4.98□□□□□ -1.61
PTPRC-213ENST00000529828 GNPATO15228 680 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 APLP1P51693 650 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 HSP90AB2PQ58FF8 381 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 PIGBQ92521 554 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 TMEM121BQ9BXQ6 578 aaPredicted RBP4.97□□□□□ -1.61
PTPRC-213ENST00000529828 BCS1LQ9Y276 419 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 TAF1LQ8IZX4 1826 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 A0A0G2JLW4 131 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 MMP10P09238 476 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 COL13A1Q5TAT6 717 aaPredicted RBP4.97□□□□□ -1.61
PTPRC-213ENST00000529828 BMP2KQ9NSY1 1161 aaPredicted RBP4.97□□□□□ -1.61
PTPRC-213ENST00000529828 RTL1A6NKG5 1358 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 PXDNLA1KZ92 1463 aa4.97□□□□□ -1.61
PTPRC-213ENST00000529828 LOC102724428A0A0B4J2F2 783 aa4.96□□□□□ -1.61
PTPRC-213ENST00000529828 SIK1P57059 783 aa4.96□□□□□ -1.61
PTPRC-213ENST00000529828 ITPK1Q13572 414 aa4.96□□□□□ -1.61
PTPRC-213ENST00000529828 ARHGAP27Q6ZUM4 889 aa4.96□□□□□ -1.61
PTPRC-213ENST00000529828 SPNS2Q8IVW8 549 aa4.96□□□□□ -1.61
PTPRC-213ENST00000529828 DNAJC5GQ8N7S2 189 aa4.96□□□□□ -1.61
PTPRC-213ENST00000529828 CICQ96RK0 1608 aaPredicted RBP4.96□□□□□ -1.62
PTPRC-213ENST00000529828 CGNL1Q0VF96 1302 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 UBR3Q6ZT12 1888 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 ST20-MTHFSA0A0A6YYL1 179 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 SNPHO15079 494 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 TOMM70O94826 608 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 SSFA2P28290 1259 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 SMARCC1Q92922 1105 aaPredicted RBP4.96□□□□□ -1.62
PTPRC-213ENST00000529828 ASAP1Q9ULH1 1129 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 EMILIN1Q9Y6C2 1016 aa4.96□□□□□ -1.62
PTPRC-213ENST00000529828 POTEFA5A3E0 1075 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 FYB1O15117 783 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 PPM1GO15355 546 aaPredicted RBP4.95□□□□□ -1.62
PTPRC-213ENST00000529828 FCHSD2O94868 740 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 DPEP1P16444 411 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 ATP6V1AP38606 617 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 KIF12Q96FN5 646 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 TESK2Q96S53 571 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 N4BP2Q86UW6 1770 aaPredicted RBP4.95□□□□□ -1.62
PTPRC-213ENST00000529828 INSRP06213 1382 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 FLT4P35916 1363 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 ST18O60284 1047 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 C9orf131Q5VYM1 1079 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 SLAIN1Q8ND83 568 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 TSPYL2Q9H2G4 693 aaPredicted RBP4.95□□□□□ -1.62
PTPRC-213ENST00000529828 TMOD3Q9NYL9 352 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 ITGB4P16144 1822 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 C10orf71Q711Q0 1435 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 NSD3Q9BZ95 1437 aa4.95□□□□□ -1.62
PTPRC-213ENST00000529828 KCPQ6ZWJ8 1503 aa4.94□□□□□ -1.62
PTPRC-213ENST00000529828 SPDYE4A6NLX3 237 aa4.94□□□□□ -1.62
PTPRC-213ENST00000529828 C16orf71Q8IYS4 520 aaPredicted RBP4.94□□□□□ -1.62
PTPRC-213ENST00000529828 KLRG1Q96E93 195 aa4.94□□□□□ -1.62
PTPRC-213ENST00000529828 WDR90Q96KV7 1748 aa4.94□□□□□ -1.62
PTPRC-213ENST00000529828 KIAA1551Q9HCM1 1747 aa4.94□□□□□ -1.62
PTPRC-213ENST00000529828 MAP2P11137 1827 aaKnown RBP4.94□□□□□ -1.62
PTPRC-213ENST00000529828 TONSLQ96HA7 1378 aa4.94□□□□□ -1.62
PTPRC-213ENST00000529828 TNS4Q8IZW8 715 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms