RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 CICQ96RK0 1608 aaPredicted RBP20.85■□□□□ 0.93
CCDC90B-215ENST00000529745 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
CCDC90B-215ENST00000529745 PPP2R1AP30153 589 aa20.83■□□□□ 0.93
CCDC90B-215ENST00000529745 MRC1P22897 1456 aa20.82■□□□□ 0.92
CCDC90B-215ENST00000529745 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
CCDC90B-215ENST00000529745 C1orf141Q5JVX7 400 aa20.82■□□□□ 0.92
CCDC90B-215ENST00000529745 AKAP4Q5JQC9 854 aa20.81■□□□□ 0.92
CCDC90B-215ENST00000529745 SLC16A10Q8TF71 515 aa20.81■□□□□ 0.92
CCDC90B-215ENST00000529745 CFAP53Q96M91 514 aa20.81■□□□□ 0.92
CCDC90B-215ENST00000529745 MTFR1LQ9H019 292 aa20.81■□□□□ 0.92
CCDC90B-215ENST00000529745 PNPLA7Q6ZV29 1317 aa20.8■□□□□ 0.92
CCDC90B-215ENST00000529745 HMOX1P09601 288 aa20.8■□□□□ 0.92
CCDC90B-215ENST00000529745 KCNQ4P56696 695 aa20.8■□□□□ 0.92
CCDC90B-215ENST00000529745 SGIP1Q9BQI5 828 aa20.8■□□□□ 0.92
CCDC90B-215ENST00000529745 ATG3Q9NT62 314 aa20.79■□□□□ 0.92
CCDC90B-215ENST00000529745 LOC102724428A0A0B4J2F2 783 aa20.78■□□□□ 0.92
CCDC90B-215ENST00000529745 SIK1P57059 783 aa20.78■□□□□ 0.92
CCDC90B-215ENST00000529745 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
CCDC90B-215ENST00000529745 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
CCDC90B-215ENST00000529745 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.92
CCDC90B-215ENST00000529745 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
CCDC90B-215ENST00000529745 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
CCDC90B-215ENST00000529745 MAP3K5Q99683 1374 aa20.75■□□□□ 0.91
CCDC90B-215ENST00000529745 U2SURPO15042 1029 aaKnown RBP20.75■□□□□ 0.91
CCDC90B-215ENST00000529745 CABP4P57796 275 aa20.75■□□□□ 0.91
CCDC90B-215ENST00000529745 MTHFSDQ2M296 383 aaKnown RBP20.75■□□□□ 0.91
CCDC90B-215ENST00000529745 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
CCDC90B-215ENST00000529745 TJP1Q07157 1748 aa20.75■□□□□ 0.91
CCDC90B-215ENST00000529745 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
CCDC90B-215ENST00000529745 FLAD1Q8NFF5 587 aa20.74■□□□□ 0.91
CCDC90B-215ENST00000529745 RSPH6AQ9H0K4 717 aa20.73■□□□□ 0.91
CCDC90B-215ENST00000529745 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
CCDC90B-215ENST00000529745 GPR162Q16538 588 aa20.72■□□□□ 0.91
CCDC90B-215ENST00000529745 ARXQ96QS3 562 aa20.72■□□□□ 0.91
CCDC90B-215ENST00000529745 ITPK1Q13572 414 aa20.71■□□□□ 0.91
CCDC90B-215ENST00000529745 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
CCDC90B-215ENST00000529745 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
CCDC90B-215ENST00000529745 GAS2L2Q8NHY3 880 aa20.71■□□□□ 0.91
CCDC90B-215ENST00000529745 SLC52A2Q9HAB3 445 aa20.71■□□□□ 0.91
CCDC90B-215ENST00000529745 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
CCDC90B-215ENST00000529745 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
CCDC90B-215ENST00000529745 RALBP1Q15311 655 aa20.7■□□□□ 0.9
CCDC90B-215ENST00000529745 COL23A1Q86Y22 540 aaPredicted RBP20.7■□□□□ 0.9
CCDC90B-215ENST00000529745 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
CCDC90B-215ENST00000529745 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
CCDC90B-215ENST00000529745 FCHSD2O94868 740 aa20.69■□□□□ 0.9
CCDC90B-215ENST00000529745 AK7Q96M32 723 aa20.69■□□□□ 0.9
CCDC90B-215ENST00000529745 SSFA2P28290 1259 aa20.68■□□□□ 0.9
CCDC90B-215ENST00000529745 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
CCDC90B-215ENST00000529745 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
CCDC90B-215ENST00000529745 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
CCDC90B-215ENST00000529745 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
CCDC90B-215ENST00000529745 RC3H1Q5TC82 1133 aaKnown RBP20.67■□□□□ 0.9
CCDC90B-215ENST00000529745 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
CCDC90B-215ENST00000529745 GNAT3A8MTJ3 354 aa20.66■□□□□ 0.9
CCDC90B-215ENST00000529745 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
CCDC90B-215ENST00000529745 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC90B-215ENST00000529745 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
CCDC90B-215ENST00000529745 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
CCDC90B-215ENST00000529745 AMIGO3Q86WK7 504 aa20.65■□□□□ 0.9
CCDC90B-215ENST00000529745 PHACTR3Q96KR7 559 aa20.65■□□□□ 0.9
CCDC90B-215ENST00000529745 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
CCDC90B-215ENST00000529745 POLD1P28340 1107 aa20.63■□□□□ 0.89
CCDC90B-215ENST00000529745 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
CCDC90B-215ENST00000529745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.62■□□□□ 0.89
CCDC90B-215ENST00000529745 MYBBP1AQ9BQG0 1328 aaKnown RBP20.61■□□□□ 0.89
CCDC90B-215ENST00000529745 GNPATO15228 680 aa20.61■□□□□ 0.89
CCDC90B-215ENST00000529745 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
CCDC90B-215ENST00000529745 PTCD1O75127 700 aaKnown RBP20.6■□□□□ 0.89
CCDC90B-215ENST00000529745 HSPA6P17066 643 aa20.6■□□□□ 0.89
CCDC90B-215ENST00000529745 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
CCDC90B-215ENST00000529745 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
CCDC90B-215ENST00000529745 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-215ENST00000529745 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-215ENST00000529745 TEFQ10587 303 aa20.58■□□□□ 0.89
CCDC90B-215ENST00000529745 PLEKHF1Q96S99 279 aa20.58■□□□□ 0.89
CCDC90B-215ENST00000529745 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
CCDC90B-215ENST00000529745 KIF13BQ9NQT8 1826 aa20.57■□□□□ 0.88
CCDC90B-215ENST00000529745 PHF14O94880 888 aa20.56■□□□□ 0.88
CCDC90B-215ENST00000529745 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
CCDC90B-215ENST00000529745 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
CCDC90B-215ENST00000529745 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
CCDC90B-215ENST00000529745 SMIM5Q71RC9 77 aa20.55■□□□□ 0.88
CCDC90B-215ENST00000529745 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
CCDC90B-215ENST00000529745 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
CCDC90B-215ENST00000529745 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
CCDC90B-215ENST00000529745 KLHL34Q8N239 644 aa20.54■□□□□ 0.88
CCDC90B-215ENST00000529745 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 NEFMP07197 916 aa20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 CYP19A1P11511 503 aaPredicted RBP20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 MSL1Q68DK7 614 aa20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 INTS5Q6P9B9 1019 aaKnown RBP20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 TTC5Q8N0Z6 440 aa20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 RTF1Q92541 710 aaKnown RBP20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 HEG1Q9ULI3 1381 aa20.53■□□□□ 0.88
CCDC90B-215ENST00000529745 NLGN2Q8NFZ4 835 aa20.51■□□□□ 0.87
CCDC90B-215ENST00000529745 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
CCDC90B-215ENST00000529745 GRIN3BO60391 1043 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms