RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
SMCO4-205ENST00000529714 CFAP44Q96MT7 982 aa17.81■□□□□ 0.44
SMCO4-205ENST00000529714 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
SMCO4-205ENST00000529714 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
SMCO4-205ENST00000529714 GNAI1P63096 354 aa17.8■□□□□ 0.44
SMCO4-205ENST00000529714 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
SMCO4-205ENST00000529714 EP400Q96L91 3159 aa17.8■□□□□ 0.44
SMCO4-205ENST00000529714 CHL1O00533 1208 aa17.79■□□□□ 0.44
SMCO4-205ENST00000529714 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
SMCO4-205ENST00000529714 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
SMCO4-205ENST00000529714 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
SMCO4-205ENST00000529714 BTAF1O14981 1849 aa17.78■□□□□ 0.44
SMCO4-205ENST00000529714 E9PSI1 815 aa17.78■□□□□ 0.44
SMCO4-205ENST00000529714 PIGBQ92521 554 aa17.78■□□□□ 0.44
SMCO4-205ENST00000529714 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
SMCO4-205ENST00000529714 ACSBG1Q96GR2 724 aa17.78■□□□□ 0.44
SMCO4-205ENST00000529714 BCL11BQ9C0K0 894 aaPredicted RBP17.78■□□□□ 0.44
SMCO4-205ENST00000529714 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
SMCO4-205ENST00000529714 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.44
SMCO4-205ENST00000529714 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
SMCO4-205ENST00000529714 KCNQ2O43526 872 aa17.76■□□□□ 0.43
SMCO4-205ENST00000529714 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
SMCO4-205ENST00000529714 TSPYL4Q9UJ04 414 aa17.75■□□□□ 0.43
SMCO4-205ENST00000529714 ZNF790Q6PG37 636 aa17.74■□□□□ 0.43
SMCO4-205ENST00000529714 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
SMCO4-205ENST00000529714 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
SMCO4-205ENST00000529714 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
SMCO4-205ENST00000529714 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
SMCO4-205ENST00000529714 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
SMCO4-205ENST00000529714 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
SMCO4-205ENST00000529714 TRIM37O94972 964 aa17.73■□□□□ 0.43
SMCO4-205ENST00000529714 TTC5Q8N0Z6 440 aa17.73■□□□□ 0.43
SMCO4-205ENST00000529714 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
SMCO4-205ENST00000529714 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
SMCO4-205ENST00000529714 ZNF831Q5JPB2 1677 aa17.72■□□□□ 0.43
SMCO4-205ENST00000529714 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
SMCO4-205ENST00000529714 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
SMCO4-205ENST00000529714 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
SMCO4-205ENST00000529714 RGPD3A6NKT7 1758 aaPredicted RBP17.71■□□□□ 0.43
SMCO4-205ENST00000529714 RGPD4Q7Z3J3 1758 aa17.71■□□□□ 0.43
SMCO4-205ENST00000529714 PTF1AQ7RTS3 328 aa17.71■□□□□ 0.43
SMCO4-205ENST00000529714 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
SMCO4-205ENST00000529714 LY75O60449 1722 aa17.71■□□□□ 0.43
SMCO4-205ENST00000529714 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
SMCO4-205ENST00000529714 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
SMCO4-205ENST00000529714 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
SMCO4-205ENST00000529714 SLC39A6Q13433 755 aa17.7■□□□□ 0.42
SMCO4-205ENST00000529714 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
SMCO4-205ENST00000529714 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
SMCO4-205ENST00000529714 EIF4A1P60842 406 aaKnown RBP17.69■□□□□ 0.42
SMCO4-205ENST00000529714 FMNL2Q96PY5 1086 aa17.69■□□□□ 0.42
SMCO4-205ENST00000529714 SOS1Q07889 1333 aaPredicted RBP17.69■□□□□ 0.42
SMCO4-205ENST00000529714 KCNQ3O43525 872 aa17.68■□□□□ 0.42
SMCO4-205ENST00000529714 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
SMCO4-205ENST00000529714 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
SMCO4-205ENST00000529714 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
SMCO4-205ENST00000529714 PLSCR1O15162 318 aa17.66■□□□□ 0.42
SMCO4-205ENST00000529714 HOXB7P09629 217 aa17.66■□□□□ 0.42
SMCO4-205ENST00000529714 LAMB4A4D0S4 1761 aa17.66■□□□□ 0.42
SMCO4-205ENST00000529714 LOC102724428A0A0B4J2F2 783 aa17.65■□□□□ 0.42
SMCO4-205ENST00000529714 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
SMCO4-205ENST00000529714 APBA3O96018 575 aa17.65■□□□□ 0.42
SMCO4-205ENST00000529714 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
SMCO4-205ENST00000529714 SIK1P57059 783 aa17.65■□□□□ 0.42
SMCO4-205ENST00000529714 C5P01031 1676 aa17.64■□□□□ 0.42
SMCO4-205ENST00000529714 TJP1Q07157 1748 aa17.64■□□□□ 0.41
SMCO4-205ENST00000529714 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
SMCO4-205ENST00000529714 SNRPA1P09661 255 aaKnown RBP17.64■□□□□ 0.41
SMCO4-205ENST00000529714 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
SMCO4-205ENST00000529714 EXOSC9Q06265 439 aaKnown RBP17.64■□□□□ 0.41
SMCO4-205ENST00000529714 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
SMCO4-205ENST00000529714 TEX13AQ9BXU3 409 aaPredicted RBP17.64■□□□□ 0.41
SMCO4-205ENST00000529714 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
SMCO4-205ENST00000529714 SLC27A3Q5K4L6 730 aa17.63■□□□□ 0.41
SMCO4-205ENST00000529714 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
SMCO4-205ENST00000529714 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
SMCO4-205ENST00000529714 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
SMCO4-205ENST00000529714 TWISTNBQ3B726 338 aaPredicted RBP17.62■□□□□ 0.41
SMCO4-205ENST00000529714 ZNF428Q96B54 188 aa17.62■□□□□ 0.41
SMCO4-205ENST00000529714 SLC4A9Q96Q91 983 aa17.62■□□□□ 0.41
SMCO4-205ENST00000529714 BAG6P46379 1132 aa17.61■□□□□ 0.41
SMCO4-205ENST00000529714 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
SMCO4-205ENST00000529714 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
SMCO4-205ENST00000529714 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
SMCO4-205ENST00000529714 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
SMCO4-205ENST00000529714 TSPYL6Q8N831 410 aa17.6■□□□□ 0.41
SMCO4-205ENST00000529714 CCNL1Q9UK58 526 aaPredicted RBP17.6■□□□□ 0.41
SMCO4-205ENST00000529714 VAMP4O75379 141 aa17.59■□□□□ 0.41
SMCO4-205ENST00000529714 RREB1Q92766 1687 aa17.58■□□□□ 0.41
SMCO4-205ENST00000529714 ERBB4Q15303 1308 aa17.58■□□□□ 0.4
SMCO4-205ENST00000529714 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.4
SMCO4-205ENST00000529714 STARD3NLO95772 234 aa17.58■□□□□ 0.4
SMCO4-205ENST00000529714 ITPK1Q13572 414 aa17.58■□□□□ 0.4
SMCO4-205ENST00000529714 TXNRD1Q16881 649 aa17.58■□□□□ 0.4
SMCO4-205ENST00000529714 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
SMCO4-205ENST00000529714 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMCO4-205ENST00000529714 CAMKK2Q96RR4 588 aa17.58■□□□□ 0.4
SMCO4-205ENST00000529714 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
SMCO4-205ENST00000529714 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
SMCO4-205ENST00000529714 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms