RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 GPR162Q16538 588 aa25.56■■□□□ 1.68
PTP4A2-212ENST00000529477 PNPLA7Q6ZV29 1317 aa25.56■■□□□ 1.68
PTP4A2-212ENST00000529477 KCNQ4P56696 695 aa25.53■■□□□ 1.68
PTP4A2-212ENST00000529477 CABP4P57796 275 aa25.53■■□□□ 1.68
PTP4A2-212ENST00000529477 AKAP4Q5JQC9 854 aa25.53■■□□□ 1.68
PTP4A2-212ENST00000529477 POLD1P28340 1107 aa25.52■■□□□ 1.68
PTP4A2-212ENST00000529477 RALBP1Q15311 655 aa25.51■■□□□ 1.67
PTP4A2-212ENST00000529477 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
PTP4A2-212ENST00000529477 KDM6AO15550 1401 aaPredicted RBP25.5■■□□□ 1.67
PTP4A2-212ENST00000529477 GIGYF1O75420 1035 aaPredicted RBP25.5■■□□□ 1.67
PTP4A2-212ENST00000529477 U2AF1L5P0DN76 240 aaPredicted RBP25.49■■□□□ 1.67
PTP4A2-212ENST00000529477 U2AF1Q01081 240 aaKnown RBP eCLIP25.49■■□□□ 1.67
PTP4A2-212ENST00000529477 SCN11AQ9UI33 1791 aa25.49■■□□□ 1.67
PTP4A2-212ENST00000529477 C5P01031 1676 aa25.48■■□□□ 1.67
PTP4A2-212ENST00000529477 ASAP1Q9ULH1 1129 aa25.48■■□□□ 1.67
PTP4A2-212ENST00000529477 MTHFSDQ2M296 383 aaKnown RBP25.47■■□□□ 1.67
PTP4A2-212ENST00000529477 NLGN2Q8NFZ4 835 aa25.47■■□□□ 1.67
PTP4A2-212ENST00000529477 GAS2L2Q8NHY3 880 aa25.47■■□□□ 1.67
PTP4A2-212ENST00000529477 LOC102724428A0A0B4J2F2 783 aa25.46■■□□□ 1.67
PTP4A2-212ENST00000529477 SIK1P57059 783 aa25.46■■□□□ 1.67
PTP4A2-212ENST00000529477 KLHL34Q8N239 644 aa25.46■■□□□ 1.67
PTP4A2-212ENST00000529477 TAF1LQ8IZX4 1826 aa25.46■■□□□ 1.67
PTP4A2-212ENST00000529477 PRKAR2BP31323 418 aa25.45■■□□□ 1.66
PTP4A2-212ENST00000529477 ATG3Q9NT62 314 aa25.45■■□□□ 1.66
PTP4A2-212ENST00000529477 VIRMAQ69YN4 1812 aaKnown RBP25.44■■□□□ 1.66
PTP4A2-212ENST00000529477 NFATC2IPQ8NCF5 419 aa25.44■■□□□ 1.66
PTP4A2-212ENST00000529477 FCHSD2O94868 740 aa25.43■■□□□ 1.66
PTP4A2-212ENST00000529477 NEFMP07197 916 aa25.43■■□□□ 1.66
PTP4A2-212ENST00000529477 RSPH6AQ9H0K4 717 aa25.43■■□□□ 1.66
PTP4A2-212ENST00000529477 RNMTO43148 476 aaKnown RBP25.42■■□□□ 1.66
PTP4A2-212ENST00000529477 ATP6V1AP38606 617 aa25.42■■□□□ 1.66
PTP4A2-212ENST00000529477 RBM42Q9BTD8 480 aaKnown RBP25.42■■□□□ 1.66
PTP4A2-212ENST00000529477 IFFO2Q5TF58 517 aa25.41■■□□□ 1.66
PTP4A2-212ENST00000529477 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
PTP4A2-212ENST00000529477 AK7Q96M32 723 aa25.41■■□□□ 1.66
PTP4A2-212ENST00000529477 GNAT3A8MTJ3 354 aa25.4■■□□□ 1.66
PTP4A2-212ENST00000529477 YBX3P16989 372 aaKnown RBP eCLIP25.4■■□□□ 1.66
PTP4A2-212ENST00000529477 SLC52A2Q9HAB3 445 aa25.4■■□□□ 1.66
PTP4A2-212ENST00000529477 LGR6Q9HBX8 967 aa25.4■■□□□ 1.66
PTP4A2-212ENST00000529477 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
PTP4A2-212ENST00000529477 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
PTP4A2-212ENST00000529477 MSH5O43196 834 aa25.39■■□□□ 1.66
PTP4A2-212ENST00000529477 GRIN3BO60391 1043 aa25.39■■□□□ 1.66
PTP4A2-212ENST00000529477 FLAD1Q8NFF5 587 aa25.39■■□□□ 1.66
PTP4A2-212ENST00000529477 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
PTP4A2-212ENST00000529477 MRC1P22897 1456 aa25.36■■□□□ 1.65
PTP4A2-212ENST00000529477 PTCD1O75127 700 aaKnown RBP25.36■■□□□ 1.65
PTP4A2-212ENST00000529477 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
PTP4A2-212ENST00000529477 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
PTP4A2-212ENST00000529477 ADAMTS7Q9UKP4 1686 aa25.36■■□□□ 1.65
PTP4A2-212ENST00000529477 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
PTP4A2-212ENST00000529477 TEFQ10587 303 aa25.35■■□□□ 1.65
PTP4A2-212ENST00000529477 COL23A1Q86Y22 540 aaPredicted RBP25.35■■□□□ 1.65
PTP4A2-212ENST00000529477 ITPK1Q13572 414 aa25.34■■□□□ 1.65
PTP4A2-212ENST00000529477 LINC00116Q8NCU8 138 aa25.34■■□□□ 1.65
PTP4A2-212ENST00000529477 RTF1Q92541 710 aaKnown RBP25.34■■□□□ 1.65
PTP4A2-212ENST00000529477 ATP10DQ9P241 1426 aa25.34■■□□□ 1.65
PTP4A2-212ENST00000529477 ADCY9O60503 1353 aa25.31■■□□□ 1.64
PTP4A2-212ENST00000529477 GNPATO15228 680 aa25.31■■□□□ 1.64
PTP4A2-212ENST00000529477 UBR3Q6ZT12 1888 aa25.31■■□□□ 1.64
PTP4A2-212ENST00000529477 PHF14O94880 888 aa25.3■■□□□ 1.64
PTP4A2-212ENST00000529477 SSFA2P28290 1259 aa25.3■■□□□ 1.64
PTP4A2-212ENST00000529477 TTC5Q8N0Z6 440 aa25.3■■□□□ 1.64
PTP4A2-212ENST00000529477 PRKRIP1Q9H875 184 aaPredicted RBP25.3■■□□□ 1.64
PTP4A2-212ENST00000529477 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
PTP4A2-212ENST00000529477 IL17REQ8NFR9 667 aa25.29■■□□□ 1.64
PTP4A2-212ENST00000529477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.28■■□□□ 1.64
PTP4A2-212ENST00000529477 SLC4A9Q96Q91 983 aa25.28■■□□□ 1.64
PTP4A2-212ENST00000529477 CD2APQ9Y5K6 639 aa25.28■■□□□ 1.64
PTP4A2-212ENST00000529477 COL5A3P25940 1745 aaPredicted RBP25.28■■□□□ 1.64
PTP4A2-212ENST00000529477 SLC39A6Q13433 755 aa25.27■■□□□ 1.64
PTP4A2-212ENST00000529477 RC3H1Q5TC82 1133 aaKnown RBP25.27■■□□□ 1.64
PTP4A2-212ENST00000529477 RTCBQ9Y3I0 505 aaKnown RBP25.27■■□□□ 1.64
PTP4A2-212ENST00000529477 HTATSF1O43719 755 aaKnown RBP25.26■■□□□ 1.63
PTP4A2-212ENST00000529477 MSL1Q68DK7 614 aa25.26■■□□□ 1.63
PTP4A2-212ENST00000529477 CNTNAP4Q9C0A0 1308 aa25.26■■□□□ 1.63
PTP4A2-212ENST00000529477 WDR43Q15061 677 aaKnown RBP eCLIP25.25■■□□□ 1.63
PTP4A2-212ENST00000529477 CEMIPQ8WUJ3 1361 aa25.25■■□□□ 1.63
PTP4A2-212ENST00000529477 SIPA1L3O60292 1781 aaPredicted RBP25.23■■□□□ 1.63
PTP4A2-212ENST00000529477 CICQ96RK0 1608 aaPredicted RBP25.23■■□□□ 1.63
PTP4A2-212ENST00000529477 ADRA2BP18089 450 aa25.22■■□□□ 1.63
PTP4A2-212ENST00000529477 TRAPPC3LQ5T215 181 aa25.22■■□□□ 1.63
PTP4A2-212ENST00000529477 PLEKHF1Q96S99 279 aa25.22■■□□□ 1.63
PTP4A2-212ENST00000529477 TJP1Q07157 1748 aa25.22■■□□□ 1.63
PTP4A2-212ENST00000529477 BTBD11A6QL63 1104 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 CRKLP46109 303 aaKnown RBP25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 ZNF790Q6PG37 636 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 MCM10Q7L590 875 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 VSIG10Q8N0Z9 540 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 GPBP1L1Q9HC44 474 aaPredicted RBP25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 DLG5Q8TDM6 1919 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 KCPQ6ZWJ8 1503 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 UBR2Q8IWV8 1755 aa25.21■■□□□ 1.63
PTP4A2-212ENST00000529477 RPS6KA4O75676 772 aa25.2■■□□□ 1.62
PTP4A2-212ENST00000529477 NFE2L2Q16236 605 aa25.2■■□□□ 1.62
PTP4A2-212ENST00000529477 AMIGO3Q86WK7 504 aa25.2■■□□□ 1.62
PTP4A2-212ENST00000529477 DNAJC10Q8IXB1 793 aa25.2■■□□□ 1.62
PTP4A2-212ENST00000529477 MYH14Q7Z406 1995 aaKnown RBP25.2■■□□□ 1.62
PTP4A2-212ENST00000529477 RFC4P35249 363 aa25.18■■□□□ 1.62
PTP4A2-212ENST00000529477 SMIM5Q71RC9 77 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms