RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-213	ENST00000529371	NFATC2IP	Q8NCF5	419 aa		32.74	■■■□□ 2.83
LTBP3-213	ENST00000529371	SMARCC1	Q92922	1105 aa	Predicted RBP	32.74	■■■□□ 2.83
LTBP3-213	ENST00000529371	CEMIP	Q8WUJ3	1361 aa		32.73	■■■□□ 2.83
LTBP3-213	ENST00000529371	PLSCR1	O15162	318 aa		32.73	■■■□□ 2.83
LTBP3-213	ENST00000529371	DCTN1	Q14203	1278 aa		32.72	■■■□□ 2.83
LTBP3-213	ENST00000529371	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.71	■■■□□ 2.83
LTBP3-213	ENST00000529371	RGPD4	Q7Z3J3	1758 aa		32.71	■■■□□ 2.83
LTBP3-213	ENST00000529371	PALLD	Q8WX93	1383 aa		32.7	■■■□□ 2.82
LTBP3-213	ENST00000529371	EZH2	Q15910	746 aa	Known RBP	32.67	■■■□□ 2.82
LTBP3-213	ENST00000529371	CAMKK2	Q96RR4	588 aa		32.67	■■■□□ 2.82
LTBP3-213	ENST00000529371	ASAP1	Q9ULH1	1129 aa		32.66	■■■□□ 2.82
LTBP3-213	ENST00000529371	THUMPD2	Q9BTF0	503 aa	Known RBP	32.64	■■■□□ 2.82
LTBP3-213	ENST00000529371	ATG3	Q9NT62	314 aa		32.64	■■■□□ 2.82
LTBP3-213	ENST00000529371	TXNRD1	Q16881	649 aa		32.63	■■■□□ 2.81
LTBP3-213	ENST00000529371	TTC5	Q8N0Z6	440 aa		32.63	■■■□□ 2.81
LTBP3-213	ENST00000529371	SIPA1L3	O60292	1781 aa	Predicted RBP	32.63	■■■□□ 2.81
LTBP3-213	ENST00000529371	BTBD11	A6QL63	1104 aa		32.62	■■■□□ 2.81
LTBP3-213	ENST00000529371	TRIM35	Q9UPQ4	493 aa		32.62	■■■□□ 2.81
LTBP3-213	ENST00000529371	TAF7	Q15545	349 aa	Predicted RBP	32.61	■■■□□ 2.81
LTBP3-213	ENST00000529371	SLC27A3	Q5K4L6	730 aa		32.61	■■■□□ 2.81
LTBP3-213	ENST00000529371	LY75	O60449	1722 aa		32.6	■■■□□ 2.81
LTBP3-213	ENST00000529371	SENP3-EIF4A1	A0A087X0R7	540 aa		32.6	■■■□□ 2.81
LTBP3-213	ENST00000529371	CCNL1	Q9UK58	526 aa	Predicted RBP	32.6	■■■□□ 2.81
LTBP3-213	ENST00000529371	RREB1	Q92766	1687 aa		32.59	■■■□□ 2.81
LTBP3-213	ENST00000529371	PAPPA	Q13219	1627 aa		32.59	■■■□□ 2.81
LTBP3-213	ENST00000529371	CALD1	Q05682	793 aa	Known RBP	32.59	■■■□□ 2.81
LTBP3-213	ENST00000529371	RBM42	Q9BTD8	480 aa	Known RBP	32.59	■■■□□ 2.81
LTBP3-213	ENST00000529371	SLC39A6	Q13433	755 aa		32.58	■■■□□ 2.81
LTBP3-213	ENST00000529371	LOC102724428	A0A0B4J2F2	783 aa		32.57	■■■□□ 2.8
LTBP3-213	ENST00000529371	HMGB2	P26583	209 aa	Known RBP	32.57	■■■□□ 2.8
LTBP3-213	ENST00000529371	SIK1	P57059	783 aa		32.57	■■■□□ 2.8
LTBP3-213	ENST00000529371	NCBP3	Q53F19	620 aa	Known RBP	32.57	■■■□□ 2.8
LTBP3-213	ENST00000529371	NGEF	Q8N5V2	710 aa		32.57	■■■□□ 2.8
LTBP3-213	ENST00000529371	PTCD1	O75127	700 aa	Known RBP	32.56	■■■□□ 2.8
LTBP3-213	ENST00000529371	CCDC27	Q2M243	656 aa		32.56	■■■□□ 2.8
LTBP3-213	ENST00000529371	SALL2	Q9Y467	1007 aa	Predicted RBP	32.56	■■■□□ 2.8
LTBP3-213	ENST00000529371	ZNF790	Q6PG37	636 aa		32.55	■■■□□ 2.8
LTBP3-213	ENST00000529371	PROM2	Q8N271	834 aa		32.54	■■■□□ 2.8
LTBP3-213	ENST00000529371	NUP188	Q5SRE5	1749 aa		32.53	■■■□□ 2.8
LTBP3-213	ENST00000529371	ATP6V1A	P38606	617 aa		32.52	■■■□□ 2.8
LTBP3-213	ENST00000529371	LAS1L	Q9Y4W2	734 aa	Known RBP	32.52	■■■□□ 2.8
LTBP3-213	ENST00000529371	TSPYL4	Q9UJ04	414 aa		32.51	■■■□□ 2.79
LTBP3-213	ENST00000529371	KCNQ4	P56696	695 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	NBPF14	Q5TI25	921 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	WWC1	Q8IX03	1113 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	LRRC4B	Q9NT99	713 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	BABAM1	Q9NWV8	329 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	MIS18A	Q9NYP9	233 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	KCP	Q6ZWJ8	1503 aa		32.5	■■■□□ 2.79
LTBP3-213	ENST00000529371	FMNL2	Q96PY5	1086 aa		32.49	■■■□□ 2.79
LTBP3-213	ENST00000529371	UBR2	Q8IWV8	1755 aa		32.49	■■■□□ 2.79
LTBP3-213	ENST00000529371	KDM3B	Q7LBC6	1761 aa		32.47	■■■□□ 2.79
LTBP3-213	ENST00000529371	KCNQ3	O43525	872 aa		32.46	■■■□□ 2.79
LTBP3-213	ENST00000529371	ZNF496	Q96IT1	587 aa	Predicted RBP	32.46	■■■□□ 2.79
LTBP3-213	ENST00000529371	C5	P01031	1676 aa		32.46	■■■□□ 2.79
LTBP3-213	ENST00000529371	ZNF831	Q5JPB2	1677 aa		32.46	■■■□□ 2.79
LTBP3-213	ENST00000529371	GNAI1	P63096	354 aa		32.45	■■■□□ 2.79
LTBP3-213	ENST00000529371	IFT57	Q9NWB7	429 aa		32.45	■■■□□ 2.79
LTBP3-213	ENST00000529371	STK32B	Q9NY57	414 aa		32.45	■■■□□ 2.79
LTBP3-213	ENST00000529371	HEG1	Q9ULI3	1381 aa		32.45	■■■□□ 2.78
LTBP3-213	ENST00000529371	VSIG10	Q8N0Z9	540 aa		32.44	■■■□□ 2.78
LTBP3-213	ENST00000529371	CFAP44	Q96MT7	982 aa		32.44	■■■□□ 2.78
LTBP3-213	ENST00000529371	ITPK1	Q13572	414 aa		32.43	■■■□□ 2.78
LTBP3-213	ENST00000529371	SLC4A9	Q96Q91	983 aa		32.43	■■■□□ 2.78
LTBP3-213	ENST00000529371	CHL1	O00533	1208 aa		32.42	■■■□□ 2.78
LTBP3-213	ENST00000529371	WDR63	Q8IWG1	891 aa		32.42	■■■□□ 2.78
LTBP3-213	ENST00000529371	TAF1L	Q8IZX4	1826 aa		32.41	■■■□□ 2.78
LTBP3-213	ENST00000529371	LINC00116	Q8NCU8	138 aa		32.4	■■■□□ 2.78
LTBP3-213	ENST00000529371	IL16	Q14005	1332 aa		32.4	■■■□□ 2.78
LTBP3-213	ENST00000529371	CIC	Q96RK0	1608 aa	Predicted RBP	32.4	■■■□□ 2.78
LTBP3-213	ENST00000529371	TJP1	Q07157	1748 aa		32.4	■■■□□ 2.78
LTBP3-213	ENST00000529371	DNAJC10	Q8IXB1	793 aa		32.39	■■■□□ 2.78
LTBP3-213	ENST00000529371	AK7	Q96M32	723 aa		32.39	■■■□□ 2.78
LTBP3-213	ENST00000529371	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.39	■■■□□ 2.78
LTBP3-213	ENST00000529371	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.39	■■■□□ 2.78
LTBP3-213	ENST00000529371	C4B	P0C0L5	1744 aa		32.38	■■■□□ 2.77
LTBP3-213	ENST00000529371	SNRPA1	P09661	255 aa	Known RBP	32.38	■■■□□ 2.77
LTBP3-213	ENST00000529371	EIF4A1	P60842	406 aa	Known RBP	32.38	■■■□□ 2.77
LTBP3-213	ENST00000529371	ZNF853	P0CG23	659 aa		32.36	■■■□□ 2.77
LTBP3-213	ENST00000529371	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.36	■■■□□ 2.77
LTBP3-213	ENST00000529371	SLC15A2	Q16348	729 aa		32.36	■■■□□ 2.77
LTBP3-213	ENST00000529371	MBIP	Q9NS73	344 aa		32.36	■■■□□ 2.77
LTBP3-213	ENST00000529371	COL5A3	P25940	1745 aa	Predicted RBP	32.35	■■■□□ 2.77
LTBP3-213	ENST00000529371	STARD3NL	O95772	234 aa		32.35	■■■□□ 2.77
LTBP3-213	ENST00000529371	CNTNAP4	Q9C0A0	1308 aa		32.34	■■■□□ 2.77
LTBP3-213	ENST00000529371	ZNF827	Q17R98	1081 aa		32.34	■■■□□ 2.77
LTBP3-213	ENST00000529371	AKT1S1	Q96B36	256 aa		32.34	■■■□□ 2.77
LTBP3-213	ENST00000529371	TFCP2L1	Q9NZI6	479 aa		32.34	■■■□□ 2.77
LTBP3-213	ENST00000529371	ZNF521	Q96K83	1311 aa		32.31	■■■□□ 2.76
LTBP3-213	ENST00000529371	GNPAT	O15228	680 aa		32.31	■■■□□ 2.76
LTBP3-213	ENST00000529371	CRKL	P46109	303 aa	Known RBP	32.31	■■■□□ 2.76
LTBP3-213	ENST00000529371	R3HDM1	Q15032	1099 aa	Known RBP	32.31	■■■□□ 2.76
LTBP3-213	ENST00000529371	RC3H1	Q5TC82	1133 aa	Known RBP	32.31	■■■□□ 2.76
LTBP3-213	ENST00000529371	CYP19A1	P11511	503 aa	Predicted RBP	32.3	■■■□□ 2.76
LTBP3-213	ENST00000529371	MYH16	Q9H6N6	1097 aa		32.3	■■■□□ 2.76
LTBP3-213	ENST00000529371	CCDC87	Q9NVE4	849 aa		32.3	■■■□□ 2.76
LTBP3-213	ENST00000529371	GIGYF1	O75420	1035 aa	Predicted RBP	32.29	■■■□□ 2.76
LTBP3-213	ENST00000529371	GOLGA2	Q08379	1002 aa		32.29	■■■□□ 2.76
LTBP3-213	ENST00000529371	LAMB4	A4D0S4	1761 aa		32.28	■■■□□ 2.76
LTBP3-213	ENST00000529371	PSD	A5PKW4	1024 aa	Predicted RBP	32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms