RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 TAF7Q15545 349 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-217ENST00000529133 PTF1AQ7RTS3 328 aa14.96□□□□□ -0.01
CAPN1-217ENST00000529133 PIGBQ92521 554 aa14.96□□□□□ -0.01
CAPN1-217ENST00000529133 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
CAPN1-217ENST00000529133 ITGB4P16144 1822 aa14.95□□□□□ -0.02
CAPN1-217ENST00000529133 SBF2Q86WG5 1849 aa14.95□□□□□ -0.02
CAPN1-217ENST00000529133 ZNF853P0CG23 659 aa14.95□□□□□ -0.02
CAPN1-217ENST00000529133 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-217ENST00000529133 IFT57Q9NWB7 429 aa14.95□□□□□ -0.02
CAPN1-217ENST00000529133 BTBD11A6QL63 1104 aa14.94□□□□□ -0.02
CAPN1-217ENST00000529133 TRIM37O94972 964 aa14.94□□□□□ -0.02
CAPN1-217ENST00000529133 GOLGA2Q08379 1002 aa14.94□□□□□ -0.02
CAPN1-217ENST00000529133 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
CAPN1-217ENST00000529133 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-217ENST00000529133 MIS18AQ9NYP9 233 aa14.94□□□□□ -0.02
CAPN1-217ENST00000529133 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
CAPN1-217ENST00000529133 CHL1O00533 1208 aa14.93□□□□□ -0.02
CAPN1-217ENST00000529133 GNAI1P63096 354 aa14.93□□□□□ -0.02
CAPN1-217ENST00000529133 BABAM1Q9NWV8 329 aa14.93□□□□□ -0.02
CAPN1-217ENST00000529133 TSPYL4Q9UJ04 414 aa14.93□□□□□ -0.02
CAPN1-217ENST00000529133 KDM3BQ7LBC6 1761 aa14.93□□□□□ -0.02
CAPN1-217ENST00000529133 KCNQ3O43525 872 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 SLC39A6Q13433 755 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 CDCA7LQ96GN5 454 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 MBIPQ9NS73 344 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 ATG3Q9NT62 314 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 ASAP1Q9ULH1 1129 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 BTAF1O14981 1849 aa14.92□□□□□ -0.02
CAPN1-217ENST00000529133 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
CAPN1-217ENST00000529133 E9PSI1 815 aa14.91□□□□□ -0.02
CAPN1-217ENST00000529133 SLFN5Q08AF3 891 aa14.91□□□□□ -0.02
CAPN1-217ENST00000529133 ILDR2Q71H61 639 aa14.91□□□□□ -0.02
CAPN1-217ENST00000529133 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
CAPN1-217ENST00000529133 KCPQ6ZWJ8 1503 aa14.91□□□□□ -0.02
CAPN1-217ENST00000529133 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
CAPN1-217ENST00000529133 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
CAPN1-217ENST00000529133 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
CAPN1-217ENST00000529133 UBR2Q8IWV8 1755 aa14.89□□□□□ -0.03
CAPN1-217ENST00000529133 TTC5Q8N0Z6 440 aa14.89□□□□□ -0.03
CAPN1-217ENST00000529133 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-217ENST00000529133 MYH16Q9H6N6 1097 aa14.89□□□□□ -0.03
CAPN1-217ENST00000529133 EIF4A1P60842 406 aaKnown RBP14.88□□□□□ -0.03
CAPN1-217ENST00000529133 TRMT2AQ8IZ69 625 aaKnown RBP14.88□□□□□ -0.03
CAPN1-217ENST00000529133 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-217ENST00000529133 HEG1Q9ULI3 1381 aa14.86□□□□□ -0.03
CAPN1-217ENST00000529133 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
CAPN1-217ENST00000529133 APBA3O96018 575 aa14.86□□□□□ -0.03
CAPN1-217ENST00000529133 KRT24Q2M2I5 525 aa14.86□□□□□ -0.03
CAPN1-217ENST00000529133 DUSP27Q5VZP5 1158 aa14.86□□□□□ -0.03
CAPN1-217ENST00000529133 FMNL2Q96PY5 1086 aa14.86□□□□□ -0.03
CAPN1-217ENST00000529133 SLC4A9Q96Q91 983 aa14.85□□□□□ -0.03
CAPN1-217ENST00000529133 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
CAPN1-217ENST00000529133 LY75O60449 1722 aa14.84□□□□□ -0.03
CAPN1-217ENST00000529133 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
CAPN1-217ENST00000529133 PLSCR1O15162 318 aa14.84□□□□□ -0.03
CAPN1-217ENST00000529133 SIK1P57059 783 aa14.84□□□□□ -0.03
CAPN1-217ENST00000529133 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
CAPN1-217ENST00000529133 C8orf58Q8NAV2 365 aa14.84□□□□□ -0.03
CAPN1-217ENST00000529133 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-217ENST00000529133 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.03
CAPN1-217ENST00000529133 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.03
CAPN1-217ENST00000529133 GIGYF1O75420 1035 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-217ENST00000529133 SF3B2Q13435 895 aaKnown RBP14.83□□□□□ -0.04
CAPN1-217ENST00000529133 CCDC125Q86Z20 511 aa14.83□□□□□ -0.04
CAPN1-217ENST00000529133 VSIG10Q8N0Z9 540 aa14.83□□□□□ -0.04
CAPN1-217ENST00000529133 UPF1Q92900 1129 aaKnown RBP eCLIP14.83□□□□□ -0.04
CAPN1-217ENST00000529133 TJP1Q07157 1748 aa14.83□□□□□ -0.04
CAPN1-217ENST00000529133 C5P01031 1676 aa14.82□□□□□ -0.04
CAPN1-217ENST00000529133 ZNF831Q5JPB2 1677 aa14.82□□□□□ -0.04
CAPN1-217ENST00000529133 PRAMEF22A3QJZ6 481 aa14.82□□□□□ -0.04
CAPN1-217ENST00000529133 SNRPA1P09661 255 aaKnown RBP14.82□□□□□ -0.04
CAPN1-217ENST00000529133 BAG6P46379 1132 aa14.82□□□□□ -0.04
CAPN1-217ENST00000529133 TSPYL6Q8N831 410 aa14.82□□□□□ -0.04
CAPN1-217ENST00000529133 CCNL1Q9UK58 526 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-217ENST00000529133 ELL2O00472 640 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-217ENST00000529133 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
CAPN1-217ENST00000529133 ITPK1Q13572 414 aa14.81□□□□□ -0.04
CAPN1-217ENST00000529133 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
CAPN1-217ENST00000529133 DNAJC10Q8IXB1 793 aa14.81□□□□□ -0.04
CAPN1-217ENST00000529133 HOXB7P09629 217 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 KCNQ4P56696 695 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 EN1Q05925 392 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-217ENST00000529133 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-217ENST00000529133 SLC27A3Q5K4L6 730 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 DEFB132Q7Z7B7 95 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 PROM2Q8N271 834 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 CAMKK2Q96RR4 588 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 LRRC4BQ9NT99 713 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 SOS1Q07889 1333 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-217ENST00000529133 LAMB4A4D0S4 1761 aa14.8□□□□□ -0.04
CAPN1-217ENST00000529133 EZH2Q15910 746 aaKnown RBP14.79□□□□□ -0.04
CAPN1-217ENST00000529133 KAT6BQ8WYB5 2073 aa14.79□□□□□ -0.04
CAPN1-217ENST00000529133 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
CAPN1-217ENST00000529133 VAMP4O75379 141 aa14.78□□□□□ -0.04
CAPN1-217ENST00000529133 LINC00116Q8NCU8 138 aa14.78□□□□□ -0.04
CAPN1-217ENST00000529133 TEX13AQ9BXU3 409 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-217ENST00000529133 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-217ENST00000529133 RREB1Q92766 1687 aa14.77□□□□□ -0.04
CAPN1-217ENST00000529133 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-217ENST00000529133 STARD3NLO95772 234 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms