RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 AKT1S1Q96B36 256 aa19.89■□□□□ 0.77
CCDC18-210ENST00000528942 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
CCDC18-210ENST00000528942 SIK1P57059 783 aa19.87■□□□□ 0.77
CCDC18-210ENST00000528942 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
CCDC18-210ENST00000528942 ATG3Q9NT62 314 aa19.87■□□□□ 0.77
CCDC18-210ENST00000528942 CICQ96RK0 1608 aaPredicted RBP19.87■□□□□ 0.77
CCDC18-210ENST00000528942 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
CCDC18-210ENST00000528942 NFATC2IPQ8NCF5 419 aa19.86■□□□□ 0.77
CCDC18-210ENST00000528942 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
CCDC18-210ENST00000528942 SLC52A2Q9HAB3 445 aa19.86■□□□□ 0.77
CCDC18-210ENST00000528942 TFCP2L1Q9NZI6 479 aa19.86■□□□□ 0.77
CCDC18-210ENST00000528942 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
CCDC18-210ENST00000528942 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
CCDC18-210ENST00000528942 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
CCDC18-210ENST00000528942 PDGFDQ9GZP0 370 aaPredicted RBP19.84■□□□□ 0.77
CCDC18-210ENST00000528942 LGR6Q9HBX8 967 aa19.84■□□□□ 0.77
CCDC18-210ENST00000528942 SPON1Q9HCB6 807 aa19.84■□□□□ 0.77
CCDC18-210ENST00000528942 UBR3Q6ZT12 1888 aa19.84■□□□□ 0.77
CCDC18-210ENST00000528942 NEFMP07197 916 aa19.83■□□□□ 0.77
CCDC18-210ENST00000528942 UBR2Q8IWV8 1755 aa19.83■□□□□ 0.76
CCDC18-210ENST00000528942 TJP1Q07157 1748 aa19.82■□□□□ 0.76
CCDC18-210ENST00000528942 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
CCDC18-210ENST00000528942 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
CCDC18-210ENST00000528942 DLG5Q8TDM6 1919 aa19.81■□□□□ 0.76
CCDC18-210ENST00000528942 ZBTB7AO95365 584 aa19.81■□□□□ 0.76
CCDC18-210ENST00000528942 AK7Q96M32 723 aa19.81■□□□□ 0.76
CCDC18-210ENST00000528942 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
CCDC18-210ENST00000528942 PNNQ9H307 717 aaKnown RBP19.81■□□□□ 0.76
CCDC18-210ENST00000528942 CEMIPQ8WUJ3 1361 aa19.81■□□□□ 0.76
CCDC18-210ENST00000528942 ITPK1Q13572 414 aa19.8■□□□□ 0.76
CCDC18-210ENST00000528942 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
CCDC18-210ENST00000528942 KCPQ6ZWJ8 1503 aa19.8■□□□□ 0.76
CCDC18-210ENST00000528942 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
CCDC18-210ENST00000528942 PTCD1O75127 700 aaKnown RBP19.79■□□□□ 0.76
CCDC18-210ENST00000528942 TEFQ10587 303 aa19.79■□□□□ 0.76
CCDC18-210ENST00000528942 LINC00116Q8NCU8 138 aa19.79■□□□□ 0.76
CCDC18-210ENST00000528942 IL17REQ8NFR9 667 aa19.78■□□□□ 0.76
CCDC18-210ENST00000528942 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
CCDC18-210ENST00000528942 PLEKHF1Q96S99 279 aa19.78■□□□□ 0.76
CCDC18-210ENST00000528942 COL24A1Q17RW2 1714 aa19.78■□□□□ 0.76
CCDC18-210ENST00000528942 SLC16A10Q8TF71 515 aa19.77■□□□□ 0.76
CCDC18-210ENST00000528942 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
CCDC18-210ENST00000528942 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
CCDC18-210ENST00000528942 FLAD1Q8NFF5 587 aa19.76■□□□□ 0.75
CCDC18-210ENST00000528942 GNPATO15228 680 aa19.75■□□□□ 0.75
CCDC18-210ENST00000528942 MSH5O43196 834 aa19.75■□□□□ 0.75
CCDC18-210ENST00000528942 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
CCDC18-210ENST00000528942 PPP1R1BQ9UD71 204 aaPredicted RBP19.75■□□□□ 0.75
CCDC18-210ENST00000528942 ATF5Q9Y2D1 282 aaPredicted RBP19.75■□□□□ 0.75
CCDC18-210ENST00000528942 CNTNAP4Q9C0A0 1308 aa19.75■□□□□ 0.75
CCDC18-210ENST00000528942 SSFA2P28290 1259 aa19.74■□□□□ 0.75
CCDC18-210ENST00000528942 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
CCDC18-210ENST00000528942 TTC5Q8N0Z6 440 aa19.74■□□□□ 0.75
CCDC18-210ENST00000528942 PTGER2P43116 358 aa19.73■□□□□ 0.75
CCDC18-210ENST00000528942 NFE2L2Q16236 605 aa19.73■□□□□ 0.75
CCDC18-210ENST00000528942 MCM10Q7L590 875 aa19.73■□□□□ 0.75
CCDC18-210ENST00000528942 COL23A1Q86Y22 540 aaPredicted RBP19.73■□□□□ 0.75
CCDC18-210ENST00000528942 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
CCDC18-210ENST00000528942 PHF14O94880 888 aa19.72■□□□□ 0.75
CCDC18-210ENST00000528942 C4AP0C0L4 1744 aa19.71■□□□□ 0.75
CCDC18-210ENST00000528942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
CCDC18-210ENST00000528942 RC3H1Q5TC82 1133 aaKnown RBP19.71■□□□□ 0.75
CCDC18-210ENST00000528942 AMIGO3Q86WK7 504 aa19.71■□□□□ 0.75
CCDC18-210ENST00000528942 ANP32CO43423 234 aa19.7■□□□□ 0.74
CCDC18-210ENST00000528942 ZNF790Q6PG37 636 aa19.7■□□□□ 0.74
CCDC18-210ENST00000528942 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
CCDC18-210ENST00000528942 SGIP1Q9BQI5 828 aa19.7■□□□□ 0.74
CCDC18-210ENST00000528942 BTBD11A6QL63 1104 aa19.69■□□□□ 0.74
CCDC18-210ENST00000528942 CRKLP46109 303 aaKnown RBP19.69■□□□□ 0.74
CCDC18-210ENST00000528942 DCTN1Q14203 1278 aa19.69■□□□□ 0.74
CCDC18-210ENST00000528942 RTCBQ9Y3I0 505 aaKnown RBP19.69■□□□□ 0.74
CCDC18-210ENST00000528942 KDM3BQ7LBC6 1761 aa19.69■□□□□ 0.74
CCDC18-210ENST00000528942 ADRA2BP18089 450 aa19.68■□□□□ 0.74
CCDC18-210ENST00000528942 POLD1P28340 1107 aa19.68■□□□□ 0.74
CCDC18-210ENST00000528942 DNAJC10Q8IXB1 793 aa19.67■□□□□ 0.74
CCDC18-210ENST00000528942 ZNF496Q96IT1 587 aaPredicted RBP19.67■□□□□ 0.74
CCDC18-210ENST00000528942 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
CCDC18-210ENST00000528942 HEG1Q9ULI3 1381 aa19.67■□□□□ 0.74
CCDC18-210ENST00000528942 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
CCDC18-210ENST00000528942 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
CCDC18-210ENST00000528942 RUNDC1Q96C34 613 aa19.66■□□□□ 0.74
CCDC18-210ENST00000528942 FMNL2Q96PY5 1086 aa19.66■□□□□ 0.74
CCDC18-210ENST00000528942 ARXQ96QS3 562 aa19.66■□□□□ 0.74
CCDC18-210ENST00000528942 CCDC87Q9NVE4 849 aa19.66■□□□□ 0.74
CCDC18-210ENST00000528942 RPS6KA4O75676 772 aa19.65■□□□□ 0.74
CCDC18-210ENST00000528942 CYP19A1P11511 503 aaPredicted RBP19.65■□□□□ 0.74
CCDC18-210ENST00000528942 LMOD3Q0VAK6 560 aa19.65■□□□□ 0.74
CCDC18-210ENST00000528942 MSL1Q68DK7 614 aa19.65■□□□□ 0.74
CCDC18-210ENST00000528942 TMPOP42166 694 aaKnown RBP19.64■□□□□ 0.73
CCDC18-210ENST00000528942 TRAPPC3LQ5T215 181 aa19.64■□□□□ 0.73
CCDC18-210ENST00000528942 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
CCDC18-210ENST00000528942 STARD3NLO95772 234 aa19.63■□□□□ 0.73
CCDC18-210ENST00000528942 RIPK4P57078 832 aa19.63■□□□□ 0.73
CCDC18-210ENST00000528942 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
CCDC18-210ENST00000528942 INTS5Q6P9B9 1019 aaKnown RBP19.63■□□□□ 0.73
CCDC18-210ENST00000528942 PNISRQ8TF01 805 aaKnown RBP19.62■□□□□ 0.73
CCDC18-210ENST00000528942 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
CCDC18-210ENST00000528942 TEX13AQ9BXU3 409 aaPredicted RBP19.62■□□□□ 0.73
CCDC18-210ENST00000528942 KCNQ3O43525 872 aa19.61■□□□□ 0.73
CCDC18-210ENST00000528942 RFC4P35249 363 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms