RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	KCNQ2	O43526	872 aa		10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	PRIM1	P49642	420 aa	Known RBP	10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	EN1	Q05925	392 aa	Predicted RBP	10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	DEFB132	Q7Z7B7	95 aa		10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	PELP1	Q8IZL8	1130 aa	Known RBP	10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	ACSBG1	Q96GR2	724 aa		10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	METRN	Q9UJH8	293 aa		10.35	□□□□□ -0.75
MS4A6A-208	ENST00000528851	ANP32C	O43423	234 aa		10.34	□□□□□ -0.75
MS4A6A-208	ENST00000528851	DCAF5	Q96JK2	942 aa		10.34	□□□□□ -0.75
MS4A6A-208	ENST00000528851	COL3A1	P02461	1466 aa	Predicted RBP	10.34	□□□□□ -0.75
MS4A6A-208	ENST00000528851	RGPD2	P0DJD1	1756 aa		10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	AKAP4	Q5JQC9	854 aa		10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	C1orf141	Q5JVX7	400 aa		10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	WNK3	Q9BYP7	1800 aa		10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	ERVV-2	B6SEH9	535 aa		10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	HMGB2	P26583	209 aa	Known RBP	10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	EZH2	Q15910	746 aa	Known RBP	10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PTF1A	Q7RTS3	328 aa		10.33	□□□□□ -0.76
MS4A6A-208	ENST00000528851	NEFM	P07197	916 aa		10.32	□□□□□ -0.76
MS4A6A-208	ENST00000528851	MTHFSD	Q2M296	383 aa	Known RBP	10.32	□□□□□ -0.76
MS4A6A-208	ENST00000528851	GAS2L2	Q8NHY3	880 aa		10.32	□□□□□ -0.76
MS4A6A-208	ENST00000528851	SYTL4	Q96C24	671 aa	Predicted RBP	10.32	□□□□□ -0.76
MS4A6A-208	ENST00000528851	RSPH6A	Q9H0K4	717 aa		10.32	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PRKAR2B	P31323	418 aa		10.31	□□□□□ -0.76
MS4A6A-208	ENST00000528851	SMARCC1	Q92922	1105 aa	Predicted RBP	10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	RGPD1	P0DJD0	1748 aa		10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	ATMIN	O43313	823 aa	Predicted RBP	10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	NBPF14	Q5TI25	921 aa		10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	MPRIP	Q6WCQ1	1025 aa		10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PROM2	Q8N271	834 aa		10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PIGB	Q92521	554 aa		10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PHACTR3	Q96KR7	559 aa		10.3	□□□□□ -0.76
MS4A6A-208	ENST00000528851	GNAT3	A8MTJ3	354 aa		10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	HTATSF1	O43719	755 aa	Known RBP	10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	CABP4	P57796	275 aa		10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	TXNRD1	Q16881	649 aa		10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	SLC27A3	Q5K4L6	730 aa		10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	SCUBE2	Q9NQ36	999 aa		10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	TMOD3	Q9NYL9	352 aa		10.29	□□□□□ -0.76
MS4A6A-208	ENST00000528851	RNMT	O43148	476 aa	Known RBP	10.28	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PLEKHF1	Q96S99	279 aa		10.28	□□□□□ -0.76
MS4A6A-208	ENST00000528851	WDR43	Q15061	677 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
MS4A6A-208	ENST00000528851	PKD1L3	Q7Z443	1732 aa		10.27	□□□□□ -0.77
MS4A6A-208	ENST00000528851	NFATC2IP	Q8NCF5	419 aa		10.27	□□□□□ -0.77
MS4A6A-208	ENST00000528851	LGR6	Q9HBX8	967 aa		10.27	□□□□□ -0.77
MS4A6A-208	ENST00000528851	IL17RE	Q8NFR9	667 aa		10.26	□□□□□ -0.77
MS4A6A-208	ENST00000528851	RTF1	Q92541	710 aa	Known RBP	10.26	□□□□□ -0.77
MS4A6A-208	ENST00000528851	SLC52A2	Q9HAB3	445 aa		10.26	□□□□□ -0.77
MS4A6A-208	ENST00000528851	ADAMTS8	Q9UP79	889 aa		10.26	□□□□□ -0.77
MS4A6A-208	ENST00000528851	SBF2	Q86WG5	1849 aa		10.25	□□□□□ -0.77
MS4A6A-208	ENST00000528851	RUNDC1	Q96C34	613 aa		10.25	□□□□□ -0.77
MS4A6A-208	ENST00000528851	ATG3	Q9NT62	314 aa		10.25	□□□□□ -0.77
MS4A6A-208	ENST00000528851	MAPK8IP3	Q9UPT6	1336 aa		10.25	□□□□□ -0.77
MS4A6A-208	ENST00000528851	SHANK3	Q9BYB0	1731 aa		10.25	□□□□□ -0.77
MS4A6A-208	ENST00000528851	NHS	Q6T4R5	1651 aa		10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	MAP3K5	Q99683	1374 aa		10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	TEF	Q10587	303 aa		10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	NFE2L2	Q16236	605 aa		10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	MS4A3	Q96HJ5	214 aa		10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	CCNL1	Q9UK58	526 aa	Predicted RBP	10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	ASAP1	Q9ULH1	1129 aa		10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	TNS1	Q9HBL0	1735 aa	Known RBP	10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	KDM6A	O15550	1401 aa	Predicted RBP	10.24	□□□□□ -0.77
MS4A6A-208	ENST00000528851	POTEJ	P0CG39	1038 aa		10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	PNISR	Q8TF01	805 aa	Known RBP	10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	LRRC4B	Q9NT99	713 aa		10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	STK32B	Q9NY57	414 aa		10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	PALLD	Q8WX93	1383 aa		10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	MNX1	P50219	401 aa	Predicted RBP	10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	SLC15A2	Q16348	729 aa		10.23	□□□□□ -0.77
MS4A6A-208	ENST00000528851	CEMIP	Q8WUJ3	1361 aa		10.22	□□□□□ -0.77
MS4A6A-208	ENST00000528851	LOC102724428	A0A0B4J2F2	783 aa		10.22	□□□□□ -0.77
MS4A6A-208	ENST00000528851	SIK1	P57059	783 aa		10.22	□□□□□ -0.77
MS4A6A-208	ENST00000528851	CCDC184	Q52MB2	194 aa		10.22	□□□□□ -0.77
MS4A6A-208	ENST00000528851	FAM163A	Q96GL9	167 aa	Predicted RBP	10.22	□□□□□ -0.77
MS4A6A-208	ENST00000528851	MRS2	Q9HD23	443 aa		10.22	□□□□□ -0.77
MS4A6A-208	ENST00000528851	ATP6V1A	P38606	617 aa		10.21	□□□□□ -0.77
MS4A6A-208	ENST00000528851	TMPO	P42166	694 aa	Known RBP	10.21	□□□□□ -0.77
MS4A6A-208	ENST00000528851	RIPK4	P57078	832 aa		10.21	□□□□□ -0.77
MS4A6A-208	ENST00000528851	LMOD3	Q0VAK6	560 aa		10.21	□□□□□ -0.77
MS4A6A-208	ENST00000528851	TAF7	Q15545	349 aa	Predicted RBP	10.21	□□□□□ -0.77
MS4A6A-208	ENST00000528851	LCE2D	Q5TA82	110 aa	Predicted RBP	10.21	□□□□□ -0.77
MS4A6A-208	ENST00000528851	R3HDM1	Q15032	1099 aa	Known RBP	10.21	□□□□□ -0.78
MS4A6A-208	ENST00000528851	MCM10	Q7L590	875 aa		10.2	□□□□□ -0.78
MS4A6A-208	ENST00000528851	VSIG10	Q8N0Z9	540 aa		10.2	□□□□□ -0.78
MS4A6A-208	ENST00000528851	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.2	□□□□□ -0.78
MS4A6A-208	ENST00000528851	RGPD4	Q7Z3J3	1758 aa		10.2	□□□□□ -0.78
MS4A6A-208	ENST00000528851	DOT1L	Q8TEK3	1739 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	BTBD11	A6QL63	1104 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	CCER2	I3L3R5	266 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	RC3H1	Q5TC82	1133 aa	Known RBP	10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ZNF790	Q6PG37	636 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	CCDC146	Q8IYE0	955 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	TTC5	Q8N0Z6	440 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	FLAD1	Q8NFF5	587 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	BABAM1	Q9NWV8	329 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	KAT6B	Q8WYB5	2073 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms