RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 STK32BQ9NY57 414 aa23.16■■□□□ 1.3
CHRDL2-206ENST00000528789 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
CHRDL2-206ENST00000528789 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
CHRDL2-206ENST00000528789 CCDC146Q8IYE0 955 aa23.15■■□□□ 1.3
CHRDL2-206ENST00000528789 ADAMTS8Q9UP79 889 aa23.15■■□□□ 1.3
CHRDL2-206ENST00000528789 MRC1P22897 1456 aa23.14■■□□□ 1.29
CHRDL2-206ENST00000528789 ZNF827Q17R98 1081 aa23.14■■□□□ 1.29
CHRDL2-206ENST00000528789 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
CHRDL2-206ENST00000528789 SIK1P57059 783 aa23.13■■□□□ 1.29
CHRDL2-206ENST00000528789 SLC15A2Q16348 729 aa23.13■■□□□ 1.29
CHRDL2-206ENST00000528789 DCTN1Q14203 1278 aa23.12■■□□□ 1.29
CHRDL2-206ENST00000528789 MCM10Q7L590 875 aa23.12■■□□□ 1.29
CHRDL2-206ENST00000528789 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
CHRDL2-206ENST00000528789 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
CHRDL2-206ENST00000528789 TEFQ10587 303 aa23.11■■□□□ 1.29
CHRDL2-206ENST00000528789 SLC39A6Q13433 755 aa23.11■■□□□ 1.29
CHRDL2-206ENST00000528789 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
CHRDL2-206ENST00000528789 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
CHRDL2-206ENST00000528789 AKT1S1Q96B36 256 aa23.1■■□□□ 1.29
CHRDL2-206ENST00000528789 PTCD1O75127 700 aaKnown RBP23.09■■□□□ 1.29
CHRDL2-206ENST00000528789 ATP6V1AP38606 617 aa23.09■■□□□ 1.29
CHRDL2-206ENST00000528789 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
CHRDL2-206ENST00000528789 C5P01031 1676 aa23.09■■□□□ 1.29
CHRDL2-206ENST00000528789 ITPK1Q13572 414 aa23.08■■□□□ 1.29
CHRDL2-206ENST00000528789 SLC4A9Q96Q91 983 aa23.08■■□□□ 1.29
CHRDL2-206ENST00000528789 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
CHRDL2-206ENST00000528789 LINC00116Q8NCU8 138 aa23.07■■□□□ 1.28
CHRDL2-206ENST00000528789 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
CHRDL2-206ENST00000528789 PDGFDQ9GZP0 370 aaPredicted RBP23.07■■□□□ 1.28
CHRDL2-206ENST00000528789 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
CHRDL2-206ENST00000528789 DLG5Q8TDM6 1919 aa23.07■■□□□ 1.28
CHRDL2-206ENST00000528789 TAF1LQ8IZX4 1826 aa23.05■■□□□ 1.28
CHRDL2-206ENST00000528789 RIPK4P57078 832 aa23.05■■□□□ 1.28
CHRDL2-206ENST00000528789 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
CHRDL2-206ENST00000528789 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
CHRDL2-206ENST00000528789 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
CHRDL2-206ENST00000528789 TMPOP42166 694 aaKnown RBP23.04■■□□□ 1.28
CHRDL2-206ENST00000528789 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
CHRDL2-206ENST00000528789 C4BP0C0L5 1744 aa23.03■■□□□ 1.28
CHRDL2-206ENST00000528789 PNISRQ8TF01 805 aaKnown RBP23.03■■□□□ 1.28
CHRDL2-206ENST00000528789 BTBD11A6QL63 1104 aa23.02■■□□□ 1.28
CHRDL2-206ENST00000528789 TTC5Q8N0Z6 440 aa23.02■■□□□ 1.28
CHRDL2-206ENST00000528789 AK7Q96M32 723 aa23.02■■□□□ 1.28
CHRDL2-206ENST00000528789 TUBGCP6Q96RT7 1819 aa23.02■■□□□ 1.28
CHRDL2-206ENST00000528789 KCPQ6ZWJ8 1503 aa23.02■■□□□ 1.28
CHRDL2-206ENST00000528789 PNPLA7Q6ZV29 1317 aa23.01■■□□□ 1.27
CHRDL2-206ENST00000528789 CASZ1Q86V15 1759 aa23.01■■□□□ 1.27
CHRDL2-206ENST00000528789 KCNQ3O43525 872 aa23■■□□□ 1.27
CHRDL2-206ENST00000528789 ZNF790Q6PG37 636 aa23■■□□□ 1.27
CHRDL2-206ENST00000528789 SMIM5Q71RC9 77 aa23■■□□□ 1.27
CHRDL2-206ENST00000528789 ZBTB7AO95365 584 aa22.99■■□□□ 1.27
CHRDL2-206ENST00000528789 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
CHRDL2-206ENST00000528789 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 APAF1O14727 1248 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 PHF14O94880 888 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 MIS18AQ9NYP9 233 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 TJP1Q07157 1748 aa22.98■■□□□ 1.27
CHRDL2-206ENST00000528789 UBR2Q8IWV8 1755 aa22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 GNPATO15228 680 aa22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 MSH5O43196 834 aa22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 LMOD3Q0VAK6 560 aa22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 TAF7Q15545 349 aaPredicted RBP22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 ZNF496Q96IT1 587 aaPredicted RBP22.97■■□□□ 1.27
CHRDL2-206ENST00000528789 COL5A3P25940 1745 aaPredicted RBP22.96■■□□□ 1.27
CHRDL2-206ENST00000528789 COL23A1Q86Y22 540 aaPredicted RBP22.96■■□□□ 1.27
CHRDL2-206ENST00000528789 QSER1Q2KHR3 1735 aa22.96■■□□□ 1.27
CHRDL2-206ENST00000528789 TRIM35Q9UPQ4 493 aa22.95■■□□□ 1.26
CHRDL2-206ENST00000528789 ATF5Q9Y2D1 282 aaPredicted RBP22.95■■□□□ 1.26
CHRDL2-206ENST00000528789 SRCAPQ6ZRS2 3230 aa22.94■■□□□ 1.26
CHRDL2-206ENST00000528789 CNTNAP4Q9C0A0 1308 aa22.94■■□□□ 1.26
CHRDL2-206ENST00000528789 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
CHRDL2-206ENST00000528789 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
CHRDL2-206ENST00000528789 FMNL2Q96PY5 1086 aa22.94■■□□□ 1.26
CHRDL2-206ENST00000528789 HEG1Q9ULI3 1381 aa22.93■■□□□ 1.26
CHRDL2-206ENST00000528789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.93■■□□□ 1.26
CHRDL2-206ENST00000528789 CRKLP46109 303 aaKnown RBP22.93■■□□□ 1.26
CHRDL2-206ENST00000528789 UBR3Q6ZT12 1888 aa22.93■■□□□ 1.26
CHRDL2-206ENST00000528789 CICQ96RK0 1608 aaPredicted RBP22.93■■□□□ 1.26
CHRDL2-206ENST00000528789 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
CHRDL2-206ENST00000528789 VSIG10Q8N0Z9 540 aa22.92■■□□□ 1.26
CHRDL2-206ENST00000528789 SPON1Q9HCB6 807 aa22.92■■□□□ 1.26
CHRDL2-206ENST00000528789 MYH14Q7Z406 1995 aaKnown RBP22.91■■□□□ 1.26
CHRDL2-206ENST00000528789 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
CHRDL2-206ENST00000528789 MTFR1LQ9H019 292 aa22.91■■□□□ 1.26
CHRDL2-206ENST00000528789 LRP5O75197 1615 aa22.9■■□□□ 1.26
CHRDL2-206ENST00000528789 SSFA2P28290 1259 aa22.9■■□□□ 1.26
CHRDL2-206ENST00000528789 INTS5Q6P9B9 1019 aaKnown RBP22.9■■□□□ 1.26
CHRDL2-206ENST00000528789 FLAD1Q8NFF5 587 aa22.9■■□□□ 1.26
CHRDL2-206ENST00000528789 RTCBQ9Y3I0 505 aaKnown RBP22.9■■□□□ 1.26
CHRDL2-206ENST00000528789 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
CHRDL2-206ENST00000528789 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.25
CHRDL2-206ENST00000528789 KDM3BQ7LBC6 1761 aa22.89■■□□□ 1.25
CHRDL2-206ENST00000528789 PRAMEF22A3QJZ6 481 aa22.88■■□□□ 1.25
CHRDL2-206ENST00000528789 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
CHRDL2-206ENST00000528789 MSL1Q68DK7 614 aa22.88■■□□□ 1.25
CHRDL2-206ENST00000528789 LAS1LQ9Y4W2 734 aaKnown RBP22.88■■□□□ 1.25
CHRDL2-206ENST00000528789 TRAPPC3LQ5T215 181 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms