RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 CEMIPQ8WUJ3 1361 aa8.15□□□□□ -1.1
MACF1-228ENST00000528611 MAP3K5Q99683 1374 aa8.15□□□□□ -1.1
MACF1-228ENST00000528611 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.1
MACF1-228ENST00000528611 ZBED9Q6R2W3 1325 aa8.15□□□□□ -1.1
MACF1-228ENST00000528611 PHKG2P15735 406 aa8.15□□□□□ -1.1
MACF1-228ENST00000528611 RIPK4P57078 832 aa8.15□□□□□ -1.1
MACF1-228ENST00000528611 MTHFSDQ2M296 383 aaKnown RBP8.15□□□□□ -1.1
MACF1-228ENST00000528611 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
MACF1-228ENST00000528611 APAF1O14727 1248 aa8.14□□□□□ -1.11
MACF1-228ENST00000528611 FAM98CQ17RN3 349 aaKnown RBP8.14□□□□□ -1.11
MACF1-228ENST00000528611 ZNF530Q6P9A1 599 aaPredicted RBP8.14□□□□□ -1.11
MACF1-228ENST00000528611 FAM196AQ6ZSG2 479 aa8.14□□□□□ -1.11
MACF1-228ENST00000528611 USHBP1Q8N6Y0 703 aa8.14□□□□□ -1.11
MACF1-228ENST00000528611 USP35Q9P2H5 1018 aa8.14□□□□□ -1.11
MACF1-228ENST00000528611 ZNF521Q96K83 1311 aa8.13□□□□□ -1.11
MACF1-228ENST00000528611 CYP27B1O15528 508 aa8.13□□□□□ -1.11
MACF1-228ENST00000528611 WWC1Q8IX03 1113 aa8.13□□□□□ -1.11
MACF1-228ENST00000528611 SEPT12Q8IYM1 358 aa8.13□□□□□ -1.11
MACF1-228ENST00000528611 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
MACF1-228ENST00000528611 LRRC37A3O60309 1634 aa8.13□□□□□ -1.11
MACF1-228ENST00000528611 RNMTO43148 476 aaKnown RBP8.12□□□□□ -1.11
MACF1-228ENST00000528611 CT47B1P0C2W7 299 aaPredicted RBP8.12□□□□□ -1.11
MACF1-228ENST00000528611 GNAI1P63096 354 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 KRT27Q7Z3Y8 459 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 PLSCR2Q9NRY7 297 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 IFT57Q9NWB7 429 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 TRIM35Q9UPQ4 493 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 MRC1P22897 1456 aa8.12□□□□□ -1.11
MACF1-228ENST00000528611 E9PSI1 815 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 TEFQ10587 303 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 TAF7Q15545 349 aaPredicted RBP8.11□□□□□ -1.11
MACF1-228ENST00000528611 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 MYH16Q9H6N6 1097 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 SLC52A2Q9HAB3 445 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 SCN11AQ9UI33 1791 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 SHANK3Q9BYB0 1731 aa8.11□□□□□ -1.11
MACF1-228ENST00000528611 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
MACF1-228ENST00000528611 CHL1O00533 1208 aa8.1□□□□□ -1.11
MACF1-228ENST00000528611 ZNF853P0CG23 659 aa8.1□□□□□ -1.11
MACF1-228ENST00000528611 HNRNPUQ00839 825 aaKnown RBP eCLIP8.1□□□□□ -1.11
MACF1-228ENST00000528611 MARCH10Q8NA82 808 aaPredicted RBP8.1□□□□□ -1.11
MACF1-228ENST00000528611 IL17REQ8NFR9 667 aa8.1□□□□□ -1.11
MACF1-228ENST00000528611 SMARCC1Q92922 1105 aaPredicted RBP8.1□□□□□ -1.11
MACF1-228ENST00000528611 DCBLD2Q96PD2 775 aa8.1□□□□□ -1.11
MACF1-228ENST00000528611 A0A0G2JS52 829 aa8.09□□□□□ -1.11
MACF1-228ENST00000528611 HOXB7P09629 217 aa8.09□□□□□ -1.11
MACF1-228ENST00000528611 CABP4P57796 275 aa8.09□□□□□ -1.11
MACF1-228ENST00000528611 MYT1Q01538 1121 aa8.09□□□□□ -1.11
MACF1-228ENST00000528611 TRMT2AQ8IZ69 625 aaKnown RBP8.09□□□□□ -1.11
MACF1-228ENST00000528611 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
MACF1-228ENST00000528611 DDX54Q8TDD1 881 aaKnown RBP8.09□□□□□ -1.11
MACF1-228ENST00000528611 TEX13AQ9BXU3 409 aaPredicted RBP8.09□□□□□ -1.11
MACF1-228ENST00000528611 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
MACF1-228ENST00000528611 TMOD3Q9NYL9 352 aa8.09□□□□□ -1.11
MACF1-228ENST00000528611 KDM6AO15550 1401 aaPredicted RBP8.09□□□□□ -1.11
MACF1-228ENST00000528611 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
MACF1-228ENST00000528611 RGS12O14924 1447 aa8.08□□□□□ -1.12
MACF1-228ENST00000528611 ZNF831Q5JPB2 1677 aa8.08□□□□□ -1.12
MACF1-228ENST00000528611 KAT6BQ8WYB5 2073 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 PLSCR1O15162 318 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 SLFN5Q08AF3 891 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 ZNF579Q8NAF0 562 aaKnown RBP8.07□□□□□ -1.12
MACF1-228ENST00000528611 NFATC2IPQ8NCF5 419 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 LGR6Q9HBX8 967 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 HEG1Q9ULI3 1381 aa8.07□□□□□ -1.12
MACF1-228ENST00000528611 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
MACF1-228ENST00000528611 NHSQ6T4R5 1651 aa8.06□□□□□ -1.12
MACF1-228ENST00000528611 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
MACF1-228ENST00000528611 ZNF790Q6PG37 636 aa8.06□□□□□ -1.12
MACF1-228ENST00000528611 MCM10Q7L590 875 aa8.06□□□□□ -1.12
MACF1-228ENST00000528611 TTC5Q8N0Z6 440 aa8.06□□□□□ -1.12
MACF1-228ENST00000528611 CICQ96RK0 1608 aaPredicted RBP8.06□□□□□ -1.12
MACF1-228ENST00000528611 VIRMAQ69YN4 1812 aaKnown RBP8.06□□□□□ -1.12
MACF1-228ENST00000528611 BRWD3Q6RI45 1802 aa8.06□□□□□ -1.12
MACF1-228ENST00000528611 ERBB4Q15303 1308 aa8.05□□□□□ -1.12
MACF1-228ENST00000528611 RGPD3A6NKT7 1758 aaPredicted RBP8.05□□□□□ -1.12
MACF1-228ENST00000528611 RGPD4Q7Z3J3 1758 aa8.05□□□□□ -1.12
MACF1-228ENST00000528611 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
MACF1-228ENST00000528611 FMNL2Q96PY5 1086 aa8.05□□□□□ -1.12
MACF1-228ENST00000528611 RRP7AQ9Y3A4 280 aaKnown RBP8.05□□□□□ -1.12
MACF1-228ENST00000528611 SBF2Q86WG5 1849 aa8.05□□□□□ -1.12
MACF1-228ENST00000528611 ITGB4P16144 1822 aa8.04□□□□□ -1.12
MACF1-228ENST00000528611 RGL2O15211 777 aa8.04□□□□□ -1.12
MACF1-228ENST00000528611 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
MACF1-228ENST00000528611 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
MACF1-228ENST00000528611 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
MACF1-228ENST00000528611 PIGBQ92521 554 aa8.04□□□□□ -1.12
MACF1-228ENST00000528611 TSPYL4Q9UJ04 414 aa8.04□□□□□ -1.12
MACF1-228ENST00000528611 PAPPAQ13219 1627 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 KDM3BQ7LBC6 1761 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
MACF1-228ENST00000528611 EIF4A1P60842 406 aaKnown RBP8.03□□□□□ -1.12
MACF1-228ENST00000528611 DCTN1Q14203 1278 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 MBIPQ9NS73 344 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms