RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ERVV-2B6SEH9 535 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 TEFQ10587 303 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 CCDC125Q86Z20 511 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 ACSBG1Q96GR2 724 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 SLC52A2Q9HAB3 445 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 MRC1P22897 1456 aa15.88■□□□□ 0.13
TRAF3IP2-211ENST00000528599 IL16Q14005 1332 aa15.87■□□□□ 0.13
TRAF3IP2-211ENST00000528599 CABP4P57796 275 aa15.87■□□□□ 0.13
TRAF3IP2-211ENST00000528599 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
TRAF3IP2-211ENST00000528599 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
TRAF3IP2-211ENST00000528599 ZNF853P0CG23 659 aa15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 SLFN5Q08AF3 891 aa15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 IFT57Q9NWB7 429 aa15.86■□□□□ 0.13
TRAF3IP2-211ENST00000528599 CHL1O00533 1208 aa15.85■□□□□ 0.13
TRAF3IP2-211ENST00000528599 GNAI1P63096 354 aa15.85■□□□□ 0.13
TRAF3IP2-211ENST00000528599 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
TRAF3IP2-211ENST00000528599 BTAF1O14981 1849 aa15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 ITGB4P16144 1822 aa15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 PIGBQ92521 554 aa15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 SYTL4Q96C24 671 aaPredicted RBP15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 TMOD3Q9NYL9 352 aa15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 KAT6BQ8WYB5 2073 aa15.84■□□□□ 0.13
TRAF3IP2-211ENST00000528599 E9PSI1 815 aa15.83■□□□□ 0.13
TRAF3IP2-211ENST00000528599 APBA3O96018 575 aa15.83■□□□□ 0.13
TRAF3IP2-211ENST00000528599 TRMT2AQ8IZ69 625 aaKnown RBP15.83■□□□□ 0.13
TRAF3IP2-211ENST00000528599 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.13
TRAF3IP2-211ENST00000528599 MBIPQ9NS73 344 aa15.83■□□□□ 0.13
TRAF3IP2-211ENST00000528599 BTBD11A6QL63 1104 aa15.83■□□□□ 0.12
TRAF3IP2-211ENST00000528599 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
TRAF3IP2-211ENST00000528599 RREB1Q92766 1687 aa15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 KCNQ3O43525 872 aa15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 CAMKK2Q96RR4 588 aa15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
TRAF3IP2-211ENST00000528599 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
TRAF3IP2-211ENST00000528599 BAG6P46379 1132 aa15.81■□□□□ 0.12
TRAF3IP2-211ENST00000528599 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
TRAF3IP2-211ENST00000528599 MYH16Q9H6N6 1097 aa15.81■□□□□ 0.12
TRAF3IP2-211ENST00000528599 RGPD3A6NKT7 1758 aaPredicted RBP15.81■□□□□ 0.12
TRAF3IP2-211ENST00000528599 RGPD4Q7Z3J3 1758 aa15.81■□□□□ 0.12
TRAF3IP2-211ENST00000528599 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
TRAF3IP2-211ENST00000528599 ASAP1Q9ULH1 1129 aa15.79■□□□□ 0.12
TRAF3IP2-211ENST00000528599 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
TRAF3IP2-211ENST00000528599 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
TRAF3IP2-211ENST00000528599 PROM2Q8N271 834 aa15.79■□□□□ 0.12
TRAF3IP2-211ENST00000528599 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
TRAF3IP2-211ENST00000528599 PAPPAQ13219 1627 aa15.79■□□□□ 0.12
TRAF3IP2-211ENST00000528599 PLSCR1O15162 318 aa15.77■□□□□ 0.12
TRAF3IP2-211ENST00000528599 EIF4A1P60842 406 aaKnown RBP15.77■□□□□ 0.12
TRAF3IP2-211ENST00000528599 EXOSC9Q06265 439 aaKnown RBP15.77■□□□□ 0.12
TRAF3IP2-211ENST00000528599 KRT24Q2M2I5 525 aa15.77■□□□□ 0.12
TRAF3IP2-211ENST00000528599 TTC5Q8N0Z6 440 aa15.76■□□□□ 0.11
TRAF3IP2-211ENST00000528599 C8orf58Q8NAV2 365 aa15.76■□□□□ 0.11
TRAF3IP2-211ENST00000528599 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP2-211ENST00000528599 KCPQ6ZWJ8 1503 aa15.75■□□□□ 0.11
TRAF3IP2-211ENST00000528599 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
TRAF3IP2-211ENST00000528599 LY75O60449 1722 aa15.75■□□□□ 0.11
TRAF3IP2-211ENST00000528599 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
TRAF3IP2-211ENST00000528599 PTCD1O75127 700 aaKnown RBP15.74■□□□□ 0.11
TRAF3IP2-211ENST00000528599 HEG1Q9ULI3 1381 aa15.74■□□□□ 0.11
TRAF3IP2-211ENST00000528599 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
TRAF3IP2-211ENST00000528599 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
TRAF3IP2-211ENST00000528599 SMARCC1Q92922 1105 aaPredicted RBP15.73■□□□□ 0.11
TRAF3IP2-211ENST00000528599 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
TRAF3IP2-211ENST00000528599 PALLDQ8WX93 1383 aa15.73■□□□□ 0.11
TRAF3IP2-211ENST00000528599 PRAMEF22A3QJZ6 481 aa15.72■□□□□ 0.11
TRAF3IP2-211ENST00000528599 KCNQ4P56696 695 aa15.72■□□□□ 0.11
TRAF3IP2-211ENST00000528599 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
TRAF3IP2-211ENST00000528599 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
TRAF3IP2-211ENST00000528599 LRRC4BQ9NT99 713 aa15.72■□□□□ 0.11
TRAF3IP2-211ENST00000528599 GIGYF1O75420 1035 aaPredicted RBP15.71■□□□□ 0.11
TRAF3IP2-211ENST00000528599 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
TRAF3IP2-211ENST00000528599 VAMP4O75379 141 aa15.7■□□□□ 0.1
TRAF3IP2-211ENST00000528599 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
TRAF3IP2-211ENST00000528599 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
TRAF3IP2-211ENST00000528599 C5P01031 1676 aa15.69■□□□□ 0.1
TRAF3IP2-211ENST00000528599 LOC102724428A0A0B4J2F2 783 aa15.69■□□□□ 0.1
TRAF3IP2-211ENST00000528599 SIK1P57059 783 aa15.69■□□□□ 0.1
TRAF3IP2-211ENST00000528599 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
TRAF3IP2-211ENST00000528599 HOXB7P09629 217 aa15.68■□□□□ 0.1
TRAF3IP2-211ENST00000528599 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
TRAF3IP2-211ENST00000528599 DNAJC10Q8IXB1 793 aa15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 PSDA5PKW4 1024 aaPredicted RBP15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 ITPK1Q13572 414 aa15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
TRAF3IP2-211ENST00000528599 TJP1Q07157 1748 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms