RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 SIPA1L3O60292 1781 aaPredicted RBP28.7■■■□□ 2.18
PACSIN3-205ENST00000528462 SLFN5Q08AF3 891 aa28.69■■■□□ 2.18
PACSIN3-205ENST00000528462 EP400Q96L91 3159 aa28.68■■■□□ 2.18
PACSIN3-205ENST00000528462 TRMT2AQ8IZ69 625 aaKnown RBP28.68■■■□□ 2.18
PACSIN3-205ENST00000528462 SPINK5Q9NQ38 1064 aaPredicted RBP28.68■■■□□ 2.18
PACSIN3-205ENST00000528462 TMOD3Q9NYL9 352 aa28.67■■■□□ 2.18
PACSIN3-205ENST00000528462 DOT1LQ8TEK3 1739 aa28.67■■■□□ 2.18
PACSIN3-205ENST00000528462 PRIM1P49642 420 aaKnown RBP28.67■■■□□ 2.18
PACSIN3-205ENST00000528462 MYH16Q9H6N6 1097 aa28.67■■■□□ 2.18
PACSIN3-205ENST00000528462 FAM182BQ5T319 152 aa28.66■■■□□ 2.18
PACSIN3-205ENST00000528462 CDCA7LQ96GN5 454 aa28.66■■■□□ 2.18
PACSIN3-205ENST00000528462 PIGBQ92521 554 aa28.64■■■□□ 2.18
PACSIN3-205ENST00000528462 ITGB4P16144 1822 aa28.64■■■□□ 2.18
PACSIN3-205ENST00000528462 BTBD11A6QL63 1104 aa28.63■■■□□ 2.17
PACSIN3-205ENST00000528462 ACSBG1Q96GR2 724 aa28.62■■■□□ 2.17
PACSIN3-205ENST00000528462 MBIPQ9NS73 344 aa28.62■■■□□ 2.17
PACSIN3-205ENST00000528462 TSPYL4Q9UJ04 414 aa28.62■■■□□ 2.17
PACSIN3-205ENST00000528462 LAS1LQ9Y4W2 734 aaKnown RBP28.62■■■□□ 2.17
PACSIN3-205ENST00000528462 KAT6BQ8WYB5 2073 aa28.62■■■□□ 2.17
PACSIN3-205ENST00000528462 NHSQ6T4R5 1651 aa28.61■■■□□ 2.17
PACSIN3-205ENST00000528462 DUSP27Q5VZP5 1158 aa28.61■■■□□ 2.17
PACSIN3-205ENST00000528462 SYTL4Q96C24 671 aaPredicted RBP28.61■■■□□ 2.17
PACSIN3-205ENST00000528462 FANCIQ9NVI1 1328 aa28.6■■■□□ 2.17
PACSIN3-205ENST00000528462 KCNQ2O43526 872 aa28.6■■■□□ 2.17
PACSIN3-205ENST00000528462 ZNF790Q6PG37 636 aa28.6■■■□□ 2.17
PACSIN3-205ENST00000528462 SBF2Q86WG5 1849 aa28.6■■■□□ 2.17
PACSIN3-205ENST00000528462 MIS18AQ9NYP9 233 aa28.59■■■□□ 2.17
PACSIN3-205ENST00000528462 BCL11BQ9C0K0 894 aaPredicted RBP28.58■■■□□ 2.17
PACSIN3-205ENST00000528462 KDM3BQ7LBC6 1761 aa28.58■■■□□ 2.17
PACSIN3-205ENST00000528462 TSR2Q969E8 191 aaKnown RBP28.58■■■□□ 2.17
PACSIN3-205ENST00000528462 PAPPAQ13219 1627 aa28.57■■■□□ 2.16
PACSIN3-205ENST00000528462 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
PACSIN3-205ENST00000528462 HEG1Q9ULI3 1381 aa28.54■■■□□ 2.16
PACSIN3-205ENST00000528462 EIF4A1P60842 406 aaKnown RBP28.54■■■□□ 2.16
PACSIN3-205ENST00000528462 SLC39A6Q13433 755 aa28.54■■■□□ 2.16
PACSIN3-205ENST00000528462 TTC5Q8N0Z6 440 aa28.54■■■□□ 2.16
PACSIN3-205ENST00000528462 ASAP1Q9ULH1 1129 aa28.54■■■□□ 2.16
PACSIN3-205ENST00000528462 KCNQ3O43525 872 aa28.52■■■□□ 2.16
PACSIN3-205ENST00000528462 PTF1AQ7RTS3 328 aa28.52■■■□□ 2.16
PACSIN3-205ENST00000528462 SMARCC1Q92922 1105 aaPredicted RBP28.52■■■□□ 2.16
PACSIN3-205ENST00000528462 UBR2Q8IWV8 1755 aa28.51■■■□□ 2.15
PACSIN3-205ENST00000528462 SOS1Q07889 1333 aaPredicted RBP28.5■■■□□ 2.15
PACSIN3-205ENST00000528462 BTAF1O14981 1849 aa28.5■■■□□ 2.15
PACSIN3-205ENST00000528462 TRIM37O94972 964 aa28.5■■■□□ 2.15
PACSIN3-205ENST00000528462 ZNF496Q96IT1 587 aaPredicted RBP28.5■■■□□ 2.15
PACSIN3-205ENST00000528462 FMNL2Q96PY5 1086 aa28.5■■■□□ 2.15
PACSIN3-205ENST00000528462 KCPQ6ZWJ8 1503 aa28.49■■■□□ 2.15
PACSIN3-205ENST00000528462 CT47B1P0C2W7 299 aaPredicted RBP28.48■■■□□ 2.15
PACSIN3-205ENST00000528462 EXOSC9Q06265 439 aaKnown RBP28.48■■■□□ 2.15
PACSIN3-205ENST00000528462 HOXB7P09629 217 aa28.47■■■□□ 2.15
PACSIN3-205ENST00000528462 PALLDQ8WX93 1383 aa28.46■■■□□ 2.15
PACSIN3-205ENST00000528462 VSIG10Q8N0Z9 540 aa28.46■■■□□ 2.15
PACSIN3-205ENST00000528462 C8orf58Q8NAV2 365 aa28.46■■■□□ 2.15
PACSIN3-205ENST00000528462 GIGYF1O75420 1035 aaPredicted RBP28.45■■■□□ 2.15
PACSIN3-205ENST00000528462 PTCD1O75127 700 aaKnown RBP28.44■■■□□ 2.14
PACSIN3-205ENST00000528462 SNRPA1P09661 255 aaKnown RBP28.43■■■□□ 2.14
PACSIN3-205ENST00000528462 KRT24Q2M2I5 525 aa28.43■■■□□ 2.14
PACSIN3-205ENST00000528462 TSPYL6Q8N831 410 aa28.43■■■□□ 2.14
PACSIN3-205ENST00000528462 TWISTNBQ3B726 338 aaPredicted RBP28.42■■■□□ 2.14
PACSIN3-205ENST00000528462 ZNF428Q96B54 188 aa28.42■■■□□ 2.14
PACSIN3-205ENST00000528462 ZNF831Q5JPB2 1677 aa28.41■■■□□ 2.14
PACSIN3-205ENST00000528462 LOC102724428A0A0B4J2F2 783 aa28.41■■■□□ 2.14
PACSIN3-205ENST00000528462 PLSCR1O15162 318 aa28.41■■■□□ 2.14
PACSIN3-205ENST00000528462 VAMP4O75379 141 aa28.41■■■□□ 2.14
PACSIN3-205ENST00000528462 SIK1P57059 783 aa28.41■■■□□ 2.14
PACSIN3-205ENST00000528462 CHMP4AQ9BY43 222 aa28.41■■■□□ 2.14
PACSIN3-205ENST00000528462 SLC4A9Q96Q91 983 aa28.4■■■□□ 2.14
PACSIN3-205ENST00000528462 CICQ96RK0 1608 aaPredicted RBP28.39■■■□□ 2.14
PACSIN3-205ENST00000528462 RBM42Q9BTD8 480 aaKnown RBP28.39■■■□□ 2.14
PACSIN3-205ENST00000528462 TEX13AQ9BXU3 409 aaPredicted RBP28.39■■■□□ 2.14
PACSIN3-205ENST00000528462 TNS1Q9HBL0 1735 aaKnown RBP28.39■■■□□ 2.13
PACSIN3-205ENST00000528462 ELL2O00472 640 aaPredicted RBP28.38■■■□□ 2.13
PACSIN3-205ENST00000528462 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
PACSIN3-205ENST00000528462 LY75O60449 1722 aa28.37■■■□□ 2.13
PACSIN3-205ENST00000528462 APBA3O96018 575 aa28.36■■■□□ 2.13
PACSIN3-205ENST00000528462 PRAMEF22A3QJZ6 481 aa28.34■■■□□ 2.13
PACSIN3-205ENST00000528462 SLC27A3Q5K4L6 730 aa28.34■■■□□ 2.13
PACSIN3-205ENST00000528462 RGPD3A6NKT7 1758 aaPredicted RBP28.34■■■□□ 2.13
PACSIN3-205ENST00000528462 RGPD4Q7Z3J3 1758 aa28.34■■■□□ 2.13
PACSIN3-205ENST00000528462 ATP6V1AP38606 617 aa28.33■■■□□ 2.13
PACSIN3-205ENST00000528462 USP16Q9Y5T5 823 aa28.33■■■□□ 2.13
PACSIN3-205ENST00000528462 CENPBP07199 599 aaPredicted RBP28.33■■■□□ 2.12
PACSIN3-205ENST00000528462 HMGB2P26583 209 aaKnown RBP28.33■■■□□ 2.12
PACSIN3-205ENST00000528462 C5P01031 1676 aa28.32■■■□□ 2.12
PACSIN3-205ENST00000528462 STARD3NLO95772 234 aa28.32■■■□□ 2.12
PACSIN3-205ENST00000528462 HDGFL1Q5TGJ6 251 aa28.32■■■□□ 2.12
PACSIN3-205ENST00000528462 CCDC30Q5VVM6 783 aa28.32■■■□□ 2.12
PACSIN3-205ENST00000528462 ALDH1L2Q3SY69 923 aa28.31■■■□□ 2.12
PACSIN3-205ENST00000528462 DNAJC10Q8IXB1 793 aa28.31■■■□□ 2.12
PACSIN3-205ENST00000528462 CCNL1Q9UK58 526 aaPredicted RBP28.31■■■□□ 2.12
PACSIN3-205ENST00000528462 LAMB4A4D0S4 1761 aa28.31■■■□□ 2.12
PACSIN3-205ENST00000528462 TJP1Q07157 1748 aa28.3■■■□□ 2.12
PACSIN3-205ENST00000528462 RARSP54136 660 aaKnown RBP28.3■■■□□ 2.12
PACSIN3-205ENST00000528462 SF3B2Q13435 895 aaKnown RBP28.3■■■□□ 2.12
PACSIN3-205ENST00000528462 ITPK1Q13572 414 aa28.3■■■□□ 2.12
PACSIN3-205ENST00000528462 ERBB4Q15303 1308 aa28.3■■■□□ 2.12
PACSIN3-205ENST00000528462 CYP19A1P11511 503 aaPredicted RBP28.29■■■□□ 2.12
PACSIN3-205ENST00000528462 RCAN3Q9UKA8 241 aa28.29■■■□□ 2.12
PACSIN3-205ENST00000528462 PROM2Q8N271 834 aa28.28■■■□□ 2.12
PACSIN3-205ENST00000528462 EIF2S2P20042 333 aaKnown RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms