RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
SEC16B-208ENST00000528461 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
SEC16B-208ENST00000528461 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
SEC16B-208ENST00000528461 MEIS3Q99687 375 aa17.03■□□□□ 0.32
SEC16B-208ENST00000528461 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
SEC16B-208ENST00000528461 CPDO75976 1380 aa17.02■□□□□ 0.32
SEC16B-208ENST00000528461 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
SEC16B-208ENST00000528461 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
SEC16B-208ENST00000528461 FLIIQ13045 1269 aa17.02■□□□□ 0.31
SEC16B-208ENST00000528461 ANKRD44Q8N8A2 993 aa17.02■□□□□ 0.31
SEC16B-208ENST00000528461 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.31
SEC16B-208ENST00000528461 MEGF6O75095 1541 aa17.01■□□□□ 0.31
SEC16B-208ENST00000528461 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
SEC16B-208ENST00000528461 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
SEC16B-208ENST00000528461 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
SEC16B-208ENST00000528461 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
SEC16B-208ENST00000528461 SOS2Q07890 1332 aaPredicted RBP17■□□□□ 0.31
SEC16B-208ENST00000528461 ABCA3Q99758 1704 aa17■□□□□ 0.31
SEC16B-208ENST00000528461 PKD1L3Q7Z443 1732 aa17■□□□□ 0.31
SEC16B-208ENST00000528461 STK31Q9BXU1 1019 aa16.99■□□□□ 0.31
SEC16B-208ENST00000528461 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
SEC16B-208ENST00000528461 KDM6AO15550 1401 aaPredicted RBP16.98■□□□□ 0.31
SEC16B-208ENST00000528461 HOXB7P09629 217 aa16.98■□□□□ 0.31
SEC16B-208ENST00000528461 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
SEC16B-208ENST00000528461 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
SEC16B-208ENST00000528461 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
SEC16B-208ENST00000528461 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
SEC16B-208ENST00000528461 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
SEC16B-208ENST00000528461 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
SEC16B-208ENST00000528461 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
SEC16B-208ENST00000528461 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
SEC16B-208ENST00000528461 NHSL1Q5SYE7 1610 aa16.97■□□□□ 0.31
SEC16B-208ENST00000528461 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
SEC16B-208ENST00000528461 TEFQ10587 303 aa16.96■□□□□ 0.31
SEC16B-208ENST00000528461 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
SEC16B-208ENST00000528461 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.3
SEC16B-208ENST00000528461 FKBP5Q13451 457 aaPredicted RBP16.95■□□□□ 0.3
SEC16B-208ENST00000528461 DDRGK1Q96HY6 314 aa16.95■□□□□ 0.3
SEC16B-208ENST00000528461 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
SEC16B-208ENST00000528461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.3
SEC16B-208ENST00000528461 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
SEC16B-208ENST00000528461 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
SEC16B-208ENST00000528461 C5P01031 1676 aa16.94■□□□□ 0.3
SEC16B-208ENST00000528461 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
SEC16B-208ENST00000528461 PHKG2P15735 406 aa16.94■□□□□ 0.3
SEC16B-208ENST00000528461 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
SEC16B-208ENST00000528461 MRC1P22897 1456 aa16.93■□□□□ 0.3
SEC16B-208ENST00000528461 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
SEC16B-208ENST00000528461 BMP2KLQ5H9B9 411 aa16.93■□□□□ 0.3
SEC16B-208ENST00000528461 RAPGEF4Q8WZA2 1011 aa16.92■□□□□ 0.3
SEC16B-208ENST00000528461 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
SEC16B-208ENST00000528461 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
SEC16B-208ENST00000528461 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
SEC16B-208ENST00000528461 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
SEC16B-208ENST00000528461 CYP27B1O15528 508 aa16.91■□□□□ 0.3
SEC16B-208ENST00000528461 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
SEC16B-208ENST00000528461 ADCY9O60503 1353 aa16.91■□□□□ 0.3
SEC16B-208ENST00000528461 PARP4Q9UKK3 1724 aaKnown RBP16.91■□□□□ 0.3
SEC16B-208ENST00000528461 GLI3P10071 1580 aa16.91■□□□□ 0.3
SEC16B-208ENST00000528461 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
SEC16B-208ENST00000528461 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
SEC16B-208ENST00000528461 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
SEC16B-208ENST00000528461 ANXA1P04083 346 aa16.9■□□□□ 0.3
SEC16B-208ENST00000528461 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.3
SEC16B-208ENST00000528461 GNAI2P04899 355 aa16.89■□□□□ 0.29
SEC16B-208ENST00000528461 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
SEC16B-208ENST00000528461 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.29
SEC16B-208ENST00000528461 OTUD7AQ8TE49 926 aaPredicted RBP16.88■□□□□ 0.29
SEC16B-208ENST00000528461 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
SEC16B-208ENST00000528461 PDIA6Q15084 440 aa16.88■□□□□ 0.29
SEC16B-208ENST00000528461 BEND3Q5T5X7 828 aa16.88■□□□□ 0.29
SEC16B-208ENST00000528461 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
SEC16B-208ENST00000528461 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 GNAI3P08754 354 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 ZNF790Q6PG37 636 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 SMARCA5O60264 1052 aaPredicted RBP16.87■□□□□ 0.29
SEC16B-208ENST00000528461 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
SEC16B-208ENST00000528461 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
SEC16B-208ENST00000528461 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
SEC16B-208ENST00000528461 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
SEC16B-208ENST00000528461 DBF4Q9UBU7 674 aaPredicted RBP16.86■□□□□ 0.29
SEC16B-208ENST00000528461 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
SEC16B-208ENST00000528461 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
SEC16B-208ENST00000528461 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
SEC16B-208ENST00000528461 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
SEC16B-208ENST00000528461 PRDM11Q9NQV5 511 aa16.84■□□□□ 0.29
SEC16B-208ENST00000528461 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
SEC16B-208ENST00000528461 MFAP1P55081 439 aaKnown RBP16.83■□□□□ 0.29
SEC16B-208ENST00000528461 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.29
SEC16B-208ENST00000528461 HMMRO75330 724 aa16.83■□□□□ 0.28
SEC16B-208ENST00000528461 NBPF7P0C2Y1 421 aaPredicted RBP16.83■□□□□ 0.28
SEC16B-208ENST00000528461 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
SEC16B-208ENST00000528461 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
SEC16B-208ENST00000528461 LRP10Q7Z4F1 713 aa16.83■□□□□ 0.28
SEC16B-208ENST00000528461 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
SEC16B-208ENST00000528461 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms