RNA–Protein interactions for RNA: ENST00000528378.5

IFT46-205, Transcript of intraflagellar transport 46, humanhuman

TSL 3

Gene IFT46, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-205ENST00000528378 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
IFT46-205ENST00000528378 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
IFT46-205ENST00000528378 KDRP35968 1356 aa21.71■■□□□ 1.07
IFT46-205ENST00000528378 TATP17735 454 aaPredicted RBP21.7■■□□□ 1.06
IFT46-205ENST00000528378 WDR43Q15061 677 aaKnown RBP eCLIP21.7■■□□□ 1.06
IFT46-205ENST00000528378 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
IFT46-205ENST00000528378 PKD1L3Q7Z443 1732 aa21.69■■□□□ 1.06
IFT46-205ENST00000528378 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
IFT46-205ENST00000528378 GRIN3BO60391 1043 aa21.69■■□□□ 1.06
IFT46-205ENST00000528378 PNISRQ8TF01 805 aaKnown RBP21.68■■□□□ 1.06
IFT46-205ENST00000528378 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
IFT46-205ENST00000528378 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
IFT46-205ENST00000528378 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
IFT46-205ENST00000528378 PALLDQ8WX93 1383 aa21.68■■□□□ 1.06
IFT46-205ENST00000528378 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
IFT46-205ENST00000528378 ADAMTS8Q9UP79 889 aa21.67■■□□□ 1.06
IFT46-205ENST00000528378 PRKAR2BP31323 418 aa21.66■■□□□ 1.06
IFT46-205ENST00000528378 ATP10DQ9P241 1426 aa21.65■■□□□ 1.06
IFT46-205ENST00000528378 CYP27B1O15528 508 aa21.64■■□□□ 1.05
IFT46-205ENST00000528378 AMIGO3Q86WK7 504 aa21.64■■□□□ 1.05
IFT46-205ENST00000528378 CCDC146Q8IYE0 955 aa21.64■■□□□ 1.05
IFT46-205ENST00000528378 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
IFT46-205ENST00000528378 SMIM5Q71RC9 77 aa21.63■■□□□ 1.05
IFT46-205ENST00000528378 CD2APQ9Y5K6 639 aa21.63■■□□□ 1.05
IFT46-205ENST00000528378 FLAD1Q8NFF5 587 aa21.62■■□□□ 1.05
IFT46-205ENST00000528378 FCHSD2O94868 740 aa21.61■■□□□ 1.05
IFT46-205ENST00000528378 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
IFT46-205ENST00000528378 PHF14O94880 888 aa21.6■■□□□ 1.05
IFT46-205ENST00000528378 AK7Q96M32 723 aa21.6■■□□□ 1.05
IFT46-205ENST00000528378 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
IFT46-205ENST00000528378 DLG5Q8TDM6 1919 aa21.59■■□□□ 1.05
IFT46-205ENST00000528378 WWC3Q9ULE0 1092 aa21.59■■□□□ 1.05
IFT46-205ENST00000528378 PIGBQ92521 554 aa21.58■■□□□ 1.05
IFT46-205ENST00000528378 SMARCC1Q92922 1105 aaPredicted RBP21.58■■□□□ 1.05
IFT46-205ENST00000528378 HMGB2P26583 209 aaKnown RBP21.57■■□□□ 1.04
IFT46-205ENST00000528378 MTHFSDQ2M296 383 aaKnown RBP21.57■■□□□ 1.04
IFT46-205ENST00000528378 ZNF526Q8TF50 670 aaPredicted RBP21.57■■□□□ 1.04
IFT46-205ENST00000528378 ADCY9O60503 1353 aa21.57■■□□□ 1.04
IFT46-205ENST00000528378 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
IFT46-205ENST00000528378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.56■■□□□ 1.04
IFT46-205ENST00000528378 PLEKHO1Q53GL0 409 aaPredicted RBP21.56■■□□□ 1.04
IFT46-205ENST00000528378 GPBP1L1Q9HC44 474 aaPredicted RBP21.56■■□□□ 1.04
IFT46-205ENST00000528378 ZNF530Q6P9A1 599 aaPredicted RBP21.55■■□□□ 1.04
IFT46-205ENST00000528378 LINC00116Q8NCU8 138 aa21.55■■□□□ 1.04
IFT46-205ENST00000528378 SPG7Q9UQ90 795 aa21.55■■□□□ 1.04
IFT46-205ENST00000528378 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
IFT46-205ENST00000528378 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
IFT46-205ENST00000528378 PLEKHG2Q9H7P9 1386 aa21.53■■□□□ 1.04
IFT46-205ENST00000528378 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
IFT46-205ENST00000528378 AMOTQ4VCS5 1084 aa21.53■■□□□ 1.04
IFT46-205ENST00000528378 LOC102724428A0A0B4J2F2 783 aa21.52■■□□□ 1.04
IFT46-205ENST00000528378 SIK1P57059 783 aa21.52■■□□□ 1.04
IFT46-205ENST00000528378 PNNQ9H307 717 aaKnown RBP21.52■■□□□ 1.04
IFT46-205ENST00000528378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.52■■□□□ 1.04
IFT46-205ENST00000528378 RRP7AQ9Y3A4 280 aaKnown RBP21.52■■□□□ 1.04
IFT46-205ENST00000528378 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
IFT46-205ENST00000528378 NEFMP07197 916 aa21.51■■□□□ 1.03
IFT46-205ENST00000528378 PHKG2P15735 406 aa21.51■■□□□ 1.03
IFT46-205ENST00000528378 SSFA2P28290 1259 aa21.51■■□□□ 1.03
IFT46-205ENST00000528378 IFFO2Q5TF58 517 aa21.51■■□□□ 1.03
IFT46-205ENST00000528378 KIF13BQ9NQT8 1826 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 KIAA1551Q9HCM1 1747 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 ITPK1Q13572 414 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 GAS2L2Q8NHY3 880 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 TMOD3Q9NYL9 352 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 SCN11AQ9UI33 1791 aa21.5■■□□□ 1.03
IFT46-205ENST00000528378 APAF1O14727 1248 aa21.49■■□□□ 1.03
IFT46-205ENST00000528378 GNPATO15228 680 aa21.49■■□□□ 1.03
IFT46-205ENST00000528378 NFE2L2Q16236 605 aa21.49■■□□□ 1.03
IFT46-205ENST00000528378 KDM6AO15550 1401 aaPredicted RBP21.48■■□□□ 1.03
IFT46-205ENST00000528378 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
IFT46-205ENST00000528378 C1orf141Q5JVX7 400 aa21.48■■□□□ 1.03
IFT46-205ENST00000528378 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
IFT46-205ENST00000528378 ADAMTS7Q9UKP4 1686 aa21.47■■□□□ 1.03
IFT46-205ENST00000528378 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
IFT46-205ENST00000528378 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
IFT46-205ENST00000528378 CICQ96RK0 1608 aaPredicted RBP21.47■■□□□ 1.03
IFT46-205ENST00000528378 HSPA6P17066 643 aa21.46■■□□□ 1.03
IFT46-205ENST00000528378 AKAP4Q5JQC9 854 aa21.46■■□□□ 1.03
IFT46-205ENST00000528378 COL5A3P25940 1745 aaPredicted RBP21.45■■□□□ 1.02
IFT46-205ENST00000528378 RIPK4P57078 832 aa21.44■■□□□ 1.02
IFT46-205ENST00000528378 DCTN1Q14203 1278 aa21.44■■□□□ 1.02
IFT46-205ENST00000528378 ATG3Q9NT62 314 aa21.44■■□□□ 1.02
IFT46-205ENST00000528378 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
IFT46-205ENST00000528378 GNAT3A8MTJ3 354 aa21.43■■□□□ 1.02
IFT46-205ENST00000528378 MMP10P09238 476 aa21.43■■□□□ 1.02
IFT46-205ENST00000528378 LGR6Q9HBX8 967 aa21.43■■□□□ 1.02
IFT46-205ENST00000528378 PXDNLA1KZ92 1463 aa21.43■■□□□ 1.02
IFT46-205ENST00000528378 BRCA1P38398 1863 aaKnown RBP21.42■■□□□ 1.02
IFT46-205ENST00000528378 ZNF831Q5JPB2 1677 aa21.42■■□□□ 1.02
IFT46-205ENST00000528378 MCM10Q7L590 875 aa21.42■■□□□ 1.02
IFT46-205ENST00000528378 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
IFT46-205ENST00000528378 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
IFT46-205ENST00000528378 SIPA1L3O60292 1781 aaPredicted RBP21.41■■□□□ 1.02
IFT46-205ENST00000528378 C4AP0C0L4 1744 aa21.41■■□□□ 1.02
IFT46-205ENST00000528378 KIF3CO14782 793 aa21.41■■□□□ 1.02
IFT46-205ENST00000528378 RNMTO43148 476 aaKnown RBP21.41■■□□□ 1.02
IFT46-205ENST00000528378 IL17REQ8NFR9 667 aa21.4■■□□□ 1.02
IFT46-205ENST00000528378 TRIM35Q9UPQ4 493 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms