RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 SLC52A2Q9HAB3 445 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 RRP7AQ9Y3A4 280 aaKnown RBP17.09■□□□□ 0.33
SCN3B-205ENST00000528267 PALLDQ8WX93 1383 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 C5P01031 1676 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 TJP1Q07157 1748 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
SCN3B-205ENST00000528267 RUNDC1Q96C34 613 aa17.08■□□□□ 0.32
SCN3B-205ENST00000528267 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
SCN3B-205ENST00000528267 KDM3BQ7LBC6 1761 aa17.07■□□□□ 0.32
SCN3B-205ENST00000528267 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-205ENST00000528267 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
SCN3B-205ENST00000528267 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-205ENST00000528267 MAPK8IP3Q9UPT6 1336 aa17.07■□□□□ 0.32
SCN3B-205ENST00000528267 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
SCN3B-205ENST00000528267 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
SCN3B-205ENST00000528267 CABP4P57796 275 aa17.07■□□□□ 0.32
SCN3B-205ENST00000528267 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
SCN3B-205ENST00000528267 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
SCN3B-205ENST00000528267 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
SCN3B-205ENST00000528267 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
SCN3B-205ENST00000528267 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
SCN3B-205ENST00000528267 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
SCN3B-205ENST00000528267 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
SCN3B-205ENST00000528267 APAF1O14727 1248 aa17.03■□□□□ 0.32
SCN3B-205ENST00000528267 KCNQ3O43525 872 aa17.03■□□□□ 0.32
SCN3B-205ENST00000528267 RIPK4P57078 832 aa17.03■□□□□ 0.32
SCN3B-205ENST00000528267 C4BP0C0L5 1744 aa17.03■□□□□ 0.32
SCN3B-205ENST00000528267 HTATSF1O43719 755 aaKnown RBP17.02■□□□□ 0.32
SCN3B-205ENST00000528267 ITPK1Q13572 414 aa17.02■□□□□ 0.32
SCN3B-205ENST00000528267 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
SCN3B-205ENST00000528267 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
SCN3B-205ENST00000528267 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
SCN3B-205ENST00000528267 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
SCN3B-205ENST00000528267 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
SCN3B-205ENST00000528267 CASZ1Q86V15 1759 aa17.01■□□□□ 0.31
SCN3B-205ENST00000528267 LOC102724428A0A0B4J2F2 783 aa17■□□□□ 0.31
SCN3B-205ENST00000528267 NEFMP07197 916 aa17■□□□□ 0.31
SCN3B-205ENST00000528267 SIK1P57059 783 aa17■□□□□ 0.31
SCN3B-205ENST00000528267 UBR3Q6ZT12 1888 aa17■□□□□ 0.31
SCN3B-205ENST00000528267 CCNL1Q9UK58 526 aaPredicted RBP17■□□□□ 0.31
SCN3B-205ENST00000528267 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
SCN3B-205ENST00000528267 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
SCN3B-205ENST00000528267 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-205ENST00000528267 TEFQ10587 303 aa16.98■□□□□ 0.31
SCN3B-205ENST00000528267 AMIGO3Q86WK7 504 aa16.98■□□□□ 0.31
SCN3B-205ENST00000528267 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
SCN3B-205ENST00000528267 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
SCN3B-205ENST00000528267 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
SCN3B-205ENST00000528267 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
SCN3B-205ENST00000528267 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
SCN3B-205ENST00000528267 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
SCN3B-205ENST00000528267 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
SCN3B-205ENST00000528267 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
SCN3B-205ENST00000528267 PDGFDQ9GZP0 370 aaPredicted RBP16.96■□□□□ 0.31
SCN3B-205ENST00000528267 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
SCN3B-205ENST00000528267 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
SCN3B-205ENST00000528267 ATP6V1AP38606 617 aa16.95■□□□□ 0.3
SCN3B-205ENST00000528267 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
SCN3B-205ENST00000528267 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
SCN3B-205ENST00000528267 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
SCN3B-205ENST00000528267 TAF7Q15545 349 aaPredicted RBP16.94■□□□□ 0.3
SCN3B-205ENST00000528267 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
SCN3B-205ENST00000528267 HEG1Q9ULI3 1381 aa16.93■□□□□ 0.3
SCN3B-205ENST00000528267 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
SCN3B-205ENST00000528267 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
SCN3B-205ENST00000528267 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
SCN3B-205ENST00000528267 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
SCN3B-205ENST00000528267 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
SCN3B-205ENST00000528267 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
SCN3B-205ENST00000528267 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
SCN3B-205ENST00000528267 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
SCN3B-205ENST00000528267 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
SCN3B-205ENST00000528267 STK32BQ9NY57 414 aa16.9■□□□□ 0.3
SCN3B-205ENST00000528267 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
SCN3B-205ENST00000528267 CHL1O00533 1208 aa16.89■□□□□ 0.29
SCN3B-205ENST00000528267 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
SCN3B-205ENST00000528267 NBPF14Q5TI25 921 aa16.89■□□□□ 0.29
SCN3B-205ENST00000528267 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
SCN3B-205ENST00000528267 CYP19A1P11511 503 aaPredicted RBP16.88■□□□□ 0.29
SCN3B-205ENST00000528267 KRT24Q2M2I5 525 aa16.88■□□□□ 0.29
SCN3B-205ENST00000528267 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
SCN3B-205ENST00000528267 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
SCN3B-205ENST00000528267 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
SCN3B-205ENST00000528267 CRKLP46109 303 aaKnown RBP16.87■□□□□ 0.29
SCN3B-205ENST00000528267 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
SCN3B-205ENST00000528267 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
SCN3B-205ENST00000528267 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
SCN3B-205ENST00000528267 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
SCN3B-205ENST00000528267 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
SCN3B-205ENST00000528267 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
SCN3B-205ENST00000528267 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
SCN3B-205ENST00000528267 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
SCN3B-205ENST00000528267 ZBTB1Q9Y2K1 713 aa16.86■□□□□ 0.29
SCN3B-205ENST00000528267 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
SCN3B-205ENST00000528267 LAS1LQ9Y4W2 734 aaKnown RBP16.85■□□□□ 0.29
SCN3B-205ENST00000528267 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms