RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 HCLS1P14317 486 aaPredicted RBP17.71■□□□□ 0.42
CAPN1-214ENST00000528165 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.71■□□□□ 0.42
CAPN1-214ENST00000528165 TSHZ3Q63HK5 1081 aa17.7■□□□□ 0.42
CAPN1-214ENST00000528165 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
CAPN1-214ENST00000528165 MX1P20591 662 aa17.7■□□□□ 0.42
CAPN1-214ENST00000528165 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-214ENST00000528165 GTPBP4Q9BZE4 634 aaKnown RBP17.69■□□□□ 0.42
CAPN1-214ENST00000528165 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
CAPN1-214ENST00000528165 TMEM87AQ8NBN3 555 aa17.69■□□□□ 0.42
CAPN1-214ENST00000528165 RILPL2Q969X0 211 aa17.69■□□□□ 0.42
CAPN1-214ENST00000528165 POGZQ7Z3K3 1410 aa17.69■□□□□ 0.42
CAPN1-214ENST00000528165 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-214ENST00000528165 TPRNQ4KMQ1 711 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 SRCIN1Q9C0H9 1055 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 KDM4AO75164 1064 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 CHMLP26374 656 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 BCL2L12Q9HB09 334 aa17.68■□□□□ 0.42
CAPN1-214ENST00000528165 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 EXOC6BQ9Y2D4 811 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 ATP7BP35670 1465 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 SSH2Q76I76 1423 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 SLC4A10Q6U841 1118 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 SLC52A1Q9NWF4 448 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 MLH3Q9UHC1 1453 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 PDCL2Q8N4E4 241 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
CAPN1-214ENST00000528165 UBE2HP62256 183 aa17.66■□□□□ 0.42
CAPN1-214ENST00000528165 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
CAPN1-214ENST00000528165 KIAA0232Q92628 1395 aa17.66■□□□□ 0.42
CAPN1-214ENST00000528165 CHL1O00533 1208 aa17.66■□□□□ 0.42
CAPN1-214ENST00000528165 NME9Q86XW9 330 aa17.66■□□□□ 0.42
CAPN1-214ENST00000528165 RPAP1Q9BWH6 1393 aaPredicted RBP17.64■□□□□ 0.42
CAPN1-214ENST00000528165 TPM3P06753 285 aa17.64■□□□□ 0.41
CAPN1-214ENST00000528165 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
CAPN1-214ENST00000528165 IL17RAQ96F46 866 aa17.64■□□□□ 0.41
CAPN1-214ENST00000528165 SALL3Q9BXA9 1300 aa17.64■□□□□ 0.41
CAPN1-214ENST00000528165 AATKQ6ZMQ8 1374 aa17.64■□□□□ 0.41
CAPN1-214ENST00000528165 KIF20AO95235 890 aa17.64■□□□□ 0.41
CAPN1-214ENST00000528165 CCT4P50991 539 aaKnown RBP17.64■□□□□ 0.41
CAPN1-214ENST00000528165 KIAA1524Q8TCG1 905 aa17.64■□□□□ 0.41
CAPN1-214ENST00000528165 GNAI2P04899 355 aa17.63■□□□□ 0.41
CAPN1-214ENST00000528165 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-214ENST00000528165 COG3Q96JB2 828 aa17.63■□□□□ 0.41
CAPN1-214ENST00000528165 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
CAPN1-214ENST00000528165 TCHHQ07283 1943 aa17.63■□□□□ 0.41
CAPN1-214ENST00000528165 MCM10Q7L590 875 aa17.62■□□□□ 0.41
CAPN1-214ENST00000528165 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
CAPN1-214ENST00000528165 F6X3S4 739 aa17.62■□□□□ 0.41
CAPN1-214ENST00000528165 RIOK3O14730 519 aaKnown RBP17.62■□□□□ 0.41
CAPN1-214ENST00000528165 ATP6V1DQ9Y5K8 247 aa17.62■□□□□ 0.41
CAPN1-214ENST00000528165 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
CAPN1-214ENST00000528165 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
CAPN1-214ENST00000528165 FIBPO43427 364 aa17.61■□□□□ 0.41
CAPN1-214ENST00000528165 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
CAPN1-214ENST00000528165 STX6O43752 255 aa17.61■□□□□ 0.41
CAPN1-214ENST00000528165 HSPA4P34932 840 aa17.61■□□□□ 0.41
CAPN1-214ENST00000528165 GIMAP6Q6P9H5 292 aa17.61■□□□□ 0.41
CAPN1-214ENST00000528165 PYCARDQ9ULZ3 195 aa17.61■□□□□ 0.41
CAPN1-214ENST00000528165 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
CAPN1-214ENST00000528165 EPB41L2O43491 1005 aaKnown RBP17.6■□□□□ 0.41
CAPN1-214ENST00000528165 SULT6B1Q6IMI4 303 aa17.6■□□□□ 0.41
CAPN1-214ENST00000528165 KCNF1Q9H3M0 494 aa17.6■□□□□ 0.41
CAPN1-214ENST00000528165 MYO5BQ9ULV0 1848 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 A0A0U1RQG5 324 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-214ENST00000528165 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 SPC24Q8NBT2 197 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 FUCA2Q9BTY2 467 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-214ENST00000528165 F13A1P00488 732 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 SYT1P21579 422 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 ANKRD7Q92527 254 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 STAP2Q9UGK3 403 aa17.59■□□□□ 0.41
CAPN1-214ENST00000528165 G2E3Q7L622 706 aa17.58■□□□□ 0.41
CAPN1-214ENST00000528165 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.41
CAPN1-214ENST00000528165 ALKQ9UM73 1620 aa17.58■□□□□ 0.41
CAPN1-214ENST00000528165 SMC3Q9UQE7 1217 aa17.58■□□□□ 0.4
CAPN1-214ENST00000528165 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
CAPN1-214ENST00000528165 AP5Z1O43299 807 aa17.57■□□□□ 0.4
CAPN1-214ENST00000528165 TUBGCP6Q96RT7 1819 aa17.57■□□□□ 0.4
CAPN1-214ENST00000528165 CTIFO43310 598 aaKnown RBP17.57■□□□□ 0.4
CAPN1-214ENST00000528165 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 PNMA6EA0A0J9YXQ4 647 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 GNAI3P08754 354 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 IL25Q9H293 177 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 LIMCH1Q9UPQ0 1083 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 CCDC192P0DO97 292 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
CAPN1-214ENST00000528165 AK2P54819 239 aa17.55■□□□□ 0.4
CAPN1-214ENST00000528165 FEZ1Q99689 392 aa17.55■□□□□ 0.4
CAPN1-214ENST00000528165 AOX1Q06278 1338 aa17.55■□□□□ 0.4
CAPN1-214ENST00000528165 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
CAPN1-214ENST00000528165 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
CAPN1-214ENST00000528165 TTC14Q96N46 770 aa17.54■□□□□ 0.4
CAPN1-214ENST00000528165 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
CAPN1-214ENST00000528165 RAD50Q92878 1312 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms