RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 MAP3K4Q9Y6R4 1608 aa17.99■□□□□ 0.47
ATM-212ENST00000527805 SYNE3Q6ZMZ3 975 aa17.99■□□□□ 0.47
ATM-212ENST00000527805 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
ATM-212ENST00000527805 GNL3LQ9NVN8 582 aaKnown RBP17.98■□□□□ 0.47
ATM-212ENST00000527805 XAGE3Q8WTP9 111 aa17.98■□□□□ 0.47
ATM-212ENST00000527805 TRIM44Q96DX7 344 aaPredicted RBP17.98■□□□□ 0.47
ATM-212ENST00000527805 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
ATM-212ENST00000527805 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
ATM-212ENST00000527805 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
ATM-212ENST00000527805 VAMP4O75379 141 aa17.98■□□□□ 0.47
ATM-212ENST00000527805 IGHMBP2P38935 993 aaKnown RBP17.98■□□□□ 0.47
ATM-212ENST00000527805 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
ATM-212ENST00000527805 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
ATM-212ENST00000527805 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
ATM-212ENST00000527805 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
ATM-212ENST00000527805 DIP2BQ9P265 1576 aa17.97■□□□□ 0.47
ATM-212ENST00000527805 MAP4K4O95819 1239 aaPredicted RBP17.97■□□□□ 0.47
ATM-212ENST00000527805 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
ATM-212ENST00000527805 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
ATM-212ENST00000527805 PTMAP06454 111 aaKnown RBP17.97■□□□□ 0.47
ATM-212ENST00000527805 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
ATM-212ENST00000527805 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
ATM-212ENST00000527805 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
ATM-212ENST00000527805 AK7Q96M32 723 aa17.96■□□□□ 0.47
ATM-212ENST00000527805 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
ATM-212ENST00000527805 GLI2P10070 1586 aa17.96■□□□□ 0.47
ATM-212ENST00000527805 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
ATM-212ENST00000527805 HIP1O00291 1037 aa17.96■□□□□ 0.46
ATM-212ENST00000527805 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.46
ATM-212ENST00000527805 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
ATM-212ENST00000527805 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATM-212ENST00000527805 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
ATM-212ENST00000527805 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
ATM-212ENST00000527805 CHMP4CQ96CF2 233 aa17.95■□□□□ 0.46
ATM-212ENST00000527805 SMARCA5O60264 1052 aaPredicted RBP17.95■□□□□ 0.46
ATM-212ENST00000527805 METTL24Q5JXM2 366 aa17.95■□□□□ 0.46
ATM-212ENST00000527805 LGR6Q9HBX8 967 aa17.95■□□□□ 0.46
ATM-212ENST00000527805 CEP152O94986 1710 aa17.95■□□□□ 0.46
ATM-212ENST00000527805 RAD21O60216 631 aa17.95■□□□□ 0.46
ATM-212ENST00000527805 IFIT5Q13325 482 aaKnown RBP17.95■□□□□ 0.46
ATM-212ENST00000527805 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
ATM-212ENST00000527805 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
ATM-212ENST00000527805 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
ATM-212ENST00000527805 AKAP17AQ02040 695 aaKnown RBP17.94■□□□□ 0.46
ATM-212ENST00000527805 H3BQV1 296 aa17.94■□□□□ 0.46
ATM-212ENST00000527805 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
ATM-212ENST00000527805 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
ATM-212ENST00000527805 USP6P35125 1406 aa17.94■□□□□ 0.46
ATM-212ENST00000527805 PHF14O94880 888 aa17.93■□□□□ 0.46
ATM-212ENST00000527805 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
ATM-212ENST00000527805 CPLX1O14810 134 aa17.93■□□□□ 0.46
ATM-212ENST00000527805 ATP7BP35670 1465 aa17.93■□□□□ 0.46
ATM-212ENST00000527805 E9PCH4 1651 aa17.93■□□□□ 0.46
ATM-212ENST00000527805 CDCA7Q9BWT1 371 aaPredicted RBP17.93■□□□□ 0.46
ATM-212ENST00000527805 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
ATM-212ENST00000527805 RAB11FIP3O75154 756 aa17.92■□□□□ 0.46
ATM-212ENST00000527805 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
ATM-212ENST00000527805 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
ATM-212ENST00000527805 MEIS3Q99687 375 aa17.92■□□□□ 0.46
ATM-212ENST00000527805 SYNMO15061 1565 aa17.92■□□□□ 0.46
ATM-212ENST00000527805 AGLP35573 1532 aa17.92■□□□□ 0.46
ATM-212ENST00000527805 FOXD4L6Q3SYB3 417 aaPredicted RBP17.91■□□□□ 0.46
ATM-212ENST00000527805 FOXD4L3Q6VB84 417 aaPredicted RBP17.91■□□□□ 0.46
ATM-212ENST00000527805 NFXL1Q6ZNB6 911 aa17.91■□□□□ 0.46
ATM-212ENST00000527805 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.91■□□□□ 0.461e-6■■■■□ 24
ATM-212ENST00000527805 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
ATM-212ENST00000527805 SKAP1Q86WV1 359 aa17.91■□□□□ 0.46
ATM-212ENST00000527805 ADGRB3O60242 1522 aa17.91■□□□□ 0.46
ATM-212ENST00000527805 RFC4P35249 363 aa17.91■□□□□ 0.46
ATM-212ENST00000527805 FAM98CQ17RN3 349 aaKnown RBP17.91■□□□□ 0.46
ATM-212ENST00000527805 ERICH2A1L162 156 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 PPP1R42Q7Z4L9 355 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 INSRP06213 1382 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 TNNQ9UQP3 1299 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 ALKQ9UM73 1620 aa17.9■□□□□ 0.46
ATM-212ENST00000527805 MX1P20591 662 aa17.89■□□□□ 0.46
ATM-212ENST00000527805 PTMSP20962 102 aa17.89■□□□□ 0.46
ATM-212ENST00000527805 CHL1O00533 1208 aa17.89■□□□□ 0.45
ATM-212ENST00000527805 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.45
ATM-212ENST00000527805 CDK11BP21127 795 aaKnown RBP17.88■□□□□ 0.45
ATM-212ENST00000527805 AKAP2Q9Y2D5 859 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 KIAA0232Q92628 1395 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 CLTCQ00610 1675 aaKnown RBP17.88■□□□□ 0.45
ATM-212ENST00000527805 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 CCDC8Q9H0W5 538 aaPredicted RBP17.88■□□□□ 0.45
ATM-212ENST00000527805 SF3A1Q15459 793 aaKnown RBP17.88■□□□□ 0.45
ATM-212ENST00000527805 USP21Q9UK80 565 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 CAMSAP1Q5T5Y3 1602 aa17.88■□□□□ 0.45
ATM-212ENST00000527805 PSMA5P28066 241 aa17.87■□□□□ 0.45
ATM-212ENST00000527805 GLRX3O76003 335 aaKnown RBP17.87■□□□□ 0.45
ATM-212ENST00000527805 NEK4P51957 841 aa17.87■□□□□ 0.45
ATM-212ENST00000527805 BACH2Q9BYV9 841 aa17.87■□□□□ 0.45
ATM-212ENST00000527805 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
ATM-212ENST00000527805 DHX16O60231 1041 aaKnown RBP17.86■□□□□ 0.45
ATM-212ENST00000527805 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
ATM-212ENST00000527805 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms