RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 RUNDC1Q96C34 613 aa30.71■■■□□ 2.51
LRRK1-206ENST00000527698 CABP4P57796 275 aa30.7■■■□□ 2.51
LRRK1-206ENST00000527698 PNISRQ8TF01 805 aaKnown RBP30.7■■■□□ 2.51
LRRK1-206ENST00000527698 RTF1Q92541 710 aaKnown RBP30.7■■■□□ 2.51
LRRK1-206ENST00000527698 ADAMTS7Q9UKP4 1686 aa30.69■■■□□ 2.5
LRRK1-206ENST00000527698 SMARCC1Q92922 1105 aaPredicted RBP30.69■■■□□ 2.5
LRRK1-206ENST00000527698 KDM6AO15550 1401 aaPredicted RBP30.68■■■□□ 2.5
LRRK1-206ENST00000527698 RNMTO43148 476 aaKnown RBP30.68■■■□□ 2.5
LRRK1-206ENST00000527698 MTFR1LQ9H019 292 aa30.68■■■□□ 2.5
LRRK1-206ENST00000527698 CCER2I3L3R5 266 aa30.67■■■□□ 2.5
LRRK1-206ENST00000527698 NFE2L2Q16236 605 aa30.67■■■□□ 2.5
LRRK1-206ENST00000527698 CCDC184Q52MB2 194 aa30.66■■■□□ 2.5
LRRK1-206ENST00000527698 ATF5Q9Y2D1 282 aaPredicted RBP30.66■■■□□ 2.5
LRRK1-206ENST00000527698 PIGBQ92521 554 aa30.65■■■□□ 2.5
LRRK1-206ENST00000527698 SLC52A2Q9HAB3 445 aa30.64■■■□□ 2.5
LRRK1-206ENST00000527698 DLG5Q8TDM6 1919 aa30.64■■■□□ 2.5
LRRK1-206ENST00000527698 LMOD3Q0VAK6 560 aa30.63■■■□□ 2.49
LRRK1-206ENST00000527698 SGIP1Q9BQI5 828 aa30.63■■■□□ 2.49
LRRK1-206ENST00000527698 LGR6Q9HBX8 967 aa30.63■■■□□ 2.49
LRRK1-206ENST00000527698 SLC27A3Q5K4L6 730 aa30.62■■■□□ 2.49
LRRK1-206ENST00000527698 NFATC2IPQ8NCF5 419 aa30.62■■■□□ 2.49
LRRK1-206ENST00000527698 TEFQ10587 303 aa30.61■■■□□ 2.49
LRRK1-206ENST00000527698 CEMIPQ8WUJ3 1361 aa30.61■■■□□ 2.49
LRRK1-206ENST00000527698 MRC1P22897 1456 aa30.61■■■□□ 2.49
LRRK1-206ENST00000527698 QSER1Q2KHR3 1735 aa30.61■■■□□ 2.49
LRRK1-206ENST00000527698 LY75O60449 1722 aa30.6■■■□□ 2.49
LRRK1-206ENST00000527698 IL17REQ8NFR9 667 aa30.6■■■□□ 2.49
LRRK1-206ENST00000527698 TMPOP42166 694 aaKnown RBP30.59■■■□□ 2.49
LRRK1-206ENST00000527698 SYT17Q9BSW7 474 aa30.59■■■□□ 2.49
LRRK1-206ENST00000527698 FHDC1Q9C0D6 1143 aaPredicted RBP30.59■■■□□ 2.49
LRRK1-206ENST00000527698 RIPK4P57078 832 aa30.58■■■□□ 2.49
LRRK1-206ENST00000527698 CCDC146Q8IYE0 955 aa30.58■■■□□ 2.49
LRRK1-206ENST00000527698 PALLDQ8WX93 1383 aa30.55■■■□□ 2.48
LRRK1-206ENST00000527698 LRRC4BQ9NT99 713 aa30.55■■■□□ 2.48
LRRK1-206ENST00000527698 UTRNP46939 3433 aa30.54■■■□□ 2.48
LRRK1-206ENST00000527698 ATG3Q9NT62 314 aa30.54■■■□□ 2.48
LRRK1-206ENST00000527698 SIPA1L3O60292 1781 aaPredicted RBP30.54■■■□□ 2.48
LRRK1-206ENST00000527698 ZNF827Q17R98 1081 aa30.53■■■□□ 2.48
LRRK1-206ENST00000527698 NCBP3Q53F19 620 aaKnown RBP30.53■■■□□ 2.48
LRRK1-206ENST00000527698 ASAP1Q9ULH1 1129 aa30.53■■■□□ 2.48
LRRK1-206ENST00000527698 CHD4Q14839 1912 aa30.53■■■□□ 2.48
LRRK1-206ENST00000527698 COL24A1Q17RW2 1714 aa30.53■■■□□ 2.48
LRRK1-206ENST00000527698 ARXQ96QS3 562 aa30.52■■■□□ 2.48
LRRK1-206ENST00000527698 ZNF831Q5JPB2 1677 aa30.52■■■□□ 2.48
LRRK1-206ENST00000527698 MCM10Q7L590 875 aa30.51■■■□□ 2.47
LRRK1-206ENST00000527698 CCNL1Q9UK58 526 aaPredicted RBP30.51■■■□□ 2.47
LRRK1-206ENST00000527698 SLC16A10Q8TF71 515 aa30.5■■■□□ 2.47
LRRK1-206ENST00000527698 AKT1S1Q96B36 256 aa30.5■■■□□ 2.47
LRRK1-206ENST00000527698 APAF1O14727 1248 aa30.49■■■□□ 2.47
LRRK1-206ENST00000527698 TAF7Q15545 349 aaPredicted RBP30.49■■■□□ 2.47
LRRK1-206ENST00000527698 FAM9BQ8IZU0 186 aa30.49■■■□□ 2.47
LRRK1-206ENST00000527698 NGEFQ8N5V2 710 aa30.49■■■□□ 2.47
LRRK1-206ENST00000527698 LOC102724428A0A0B4J2F2 783 aa30.48■■■□□ 2.47
LRRK1-206ENST00000527698 SIK1P57059 783 aa30.48■■■□□ 2.47
LRRK1-206ENST00000527698 TTC5Q8N0Z6 440 aa30.48■■■□□ 2.47
LRRK1-206ENST00000527698 NEUROD2Q15784 382 aa30.47■■■□□ 2.47
LRRK1-206ENST00000527698 TUBGCP6Q96RT7 1819 aa30.47■■■□□ 2.47
LRRK1-206ENST00000527698 BTBD11A6QL63 1104 aa30.46■■■□□ 2.47
LRRK1-206ENST00000527698 MIER1Q8N108 512 aa30.46■■■□□ 2.47
LRRK1-206ENST00000527698 BABAM1Q9NWV8 329 aa30.46■■■□□ 2.47
LRRK1-206ENST00000527698 CALD1Q05682 793 aaKnown RBP30.45■■■□□ 2.47
LRRK1-206ENST00000527698 DCTN1Q14203 1278 aa30.45■■■□□ 2.47
LRRK1-206ENST00000527698 ZNF790Q6PG37 636 aa30.44■■■□□ 2.46
LRRK1-206ENST00000527698 VSIG10Q8N0Z9 540 aa30.43■■■□□ 2.46
LRRK1-206ENST00000527698 RBM42Q9BTD8 480 aaKnown RBP30.43■■■□□ 2.46
LRRK1-206ENST00000527698 RRP7AQ9Y3A4 280 aaKnown RBP30.43■■■□□ 2.46
LRRK1-206ENST00000527698 TAF1LQ8IZX4 1826 aa30.43■■■□□ 2.46
LRRK1-206ENST00000527698 ATP6V1AP38606 617 aa30.42■■■□□ 2.46
LRRK1-206ENST00000527698 CCDC27Q2M243 656 aa30.42■■■□□ 2.46
LRRK1-206ENST00000527698 TRIM35Q9UPQ4 493 aa30.42■■■□□ 2.46
LRRK1-206ENST00000527698 PNPLA7Q6ZV29 1317 aa30.42■■■□□ 2.46
LRRK1-206ENST00000527698 UBR2Q8IWV8 1755 aa30.41■■■□□ 2.46
LRRK1-206ENST00000527698 ZNF784Q8NCA9 323 aaPredicted RBP30.41■■■□□ 2.46
LRRK1-206ENST00000527698 C5P01031 1676 aa30.41■■■□□ 2.46
LRRK1-206ENST00000527698 PTCD1O75127 700 aaKnown RBP30.39■■■□□ 2.46
LRRK1-206ENST00000527698 SLC39A6Q13433 755 aa30.39■■■□□ 2.46
LRRK1-206ENST00000527698 TEX13AQ9BXU3 409 aaPredicted RBP30.39■■■□□ 2.46
LRRK1-206ENST00000527698 CICQ96RK0 1608 aaPredicted RBP30.39■■■□□ 2.46
LRRK1-206ENST00000527698 POLD1P28340 1107 aa30.38■■■□□ 2.45
LRRK1-206ENST00000527698 FMNL2Q96PY5 1086 aa30.38■■■□□ 2.45
LRRK1-206ENST00000527698 TFCP2L1Q9NZI6 479 aa30.38■■■□□ 2.45
LRRK1-206ENST00000527698 KCPQ6ZWJ8 1503 aa30.35■■■□□ 2.45
LRRK1-206ENST00000527698 THUMPD2Q9BTF0 503 aaKnown RBP30.34■■■□□ 2.45
LRRK1-206ENST00000527698 RC3H1Q5TC82 1133 aaKnown RBP30.33■■■□□ 2.45
LRRK1-206ENST00000527698 KDM3BQ7LBC6 1761 aa30.33■■■□□ 2.45
LRRK1-206ENST00000527698 KCNQ4P56696 695 aa30.32■■■□□ 2.44
LRRK1-206ENST00000527698 C4BP0C0L5 1744 aa30.32■■■□□ 2.44
LRRK1-206ENST00000527698 HEG1Q9ULI3 1381 aa30.31■■■□□ 2.44
LRRK1-206ENST00000527698 COL5A3P25940 1745 aaPredicted RBP30.31■■■□□ 2.44
LRRK1-206ENST00000527698 FLAD1Q8NFF5 587 aa30.31■■■□□ 2.44
LRRK1-206ENST00000527698 ZNF496Q96IT1 587 aaPredicted RBP30.31■■■□□ 2.44
LRRK1-206ENST00000527698 CFAP44Q96MT7 982 aa30.31■■■□□ 2.44
LRRK1-206ENST00000527698 SLC4A9Q96Q91 983 aa30.31■■■□□ 2.44
LRRK1-206ENST00000527698 TSPYL4Q9UJ04 414 aa30.31■■■□□ 2.44
LRRK1-206ENST00000527698 STARD3NLO95772 234 aa30.3■■■□□ 2.44
LRRK1-206ENST00000527698 ITPK1Q13572 414 aa30.3■■■□□ 2.44
LRRK1-206ENST00000527698 AK7Q96M32 723 aa30.3■■■□□ 2.44
LRRK1-206ENST00000527698 CHL1O00533 1208 aa30.29■■■□□ 2.44
LRRK1-206ENST00000527698 GNAI1P63096 354 aa30.29■■■□□ 2.44
LRRK1-206ENST00000527698 GPR162Q16538 588 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms