RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
CAPN1-209ENST00000527469 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
CAPN1-209ENST00000527469 PAPPAQ13219 1627 aa17.77■□□□□ 0.44
CAPN1-209ENST00000527469 TEFQ10587 303 aa17.77■□□□□ 0.44
CAPN1-209ENST00000527469 RTF1Q92541 710 aaKnown RBP17.77■□□□□ 0.44
CAPN1-209ENST00000527469 AKT1S1Q96B36 256 aa17.77■□□□□ 0.44
CAPN1-209ENST00000527469 AK7Q96M32 723 aa17.77■□□□□ 0.44
CAPN1-209ENST00000527469 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-209ENST00000527469 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.44
CAPN1-209ENST00000527469 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-209ENST00000527469 MAPK8IP3Q9UPT6 1336 aa17.76■□□□□ 0.43
CAPN1-209ENST00000527469 ZBTB7AO95365 584 aa17.76■□□□□ 0.43
CAPN1-209ENST00000527469 PTCD1O75127 700 aaKnown RBP17.75■□□□□ 0.43
CAPN1-209ENST00000527469 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
CAPN1-209ENST00000527469 SCN11AQ9UI33 1791 aa17.75■□□□□ 0.43
CAPN1-209ENST00000527469 LRP5O75197 1615 aa17.75■□□□□ 0.43
CAPN1-209ENST00000527469 C5P01031 1676 aa17.74■□□□□ 0.43
CAPN1-209ENST00000527469 PDGFDQ9GZP0 370 aaPredicted RBP17.74■□□□□ 0.43
CAPN1-209ENST00000527469 TTC5Q8N0Z6 440 aa17.73■□□□□ 0.43
CAPN1-209ENST00000527469 FLAD1Q8NFF5 587 aa17.73■□□□□ 0.43
CAPN1-209ENST00000527469 MTFR1LQ9H019 292 aa17.73■□□□□ 0.43
CAPN1-209ENST00000527469 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-209ENST00000527469 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
CAPN1-209ENST00000527469 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
CAPN1-209ENST00000527469 ANP32CO43423 234 aa17.71■□□□□ 0.43
CAPN1-209ENST00000527469 ITPK1Q13572 414 aa17.71■□□□□ 0.43
CAPN1-209ENST00000527469 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.43
CAPN1-209ENST00000527469 MRC1P22897 1456 aa17.7■□□□□ 0.42
CAPN1-209ENST00000527469 GNPATO15228 680 aa17.7■□□□□ 0.42
CAPN1-209ENST00000527469 PHF14O94880 888 aa17.7■□□□□ 0.42
CAPN1-209ENST00000527469 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
CAPN1-209ENST00000527469 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
CAPN1-209ENST00000527469 C4BP0C0L5 1744 aa17.69■□□□□ 0.42
CAPN1-209ENST00000527469 SLC39A6Q13433 755 aa17.69■□□□□ 0.42
CAPN1-209ENST00000527469 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
CAPN1-209ENST00000527469 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
CAPN1-209ENST00000527469 POLD1P28340 1107 aa17.68■□□□□ 0.42
CAPN1-209ENST00000527469 MCM10Q7L590 875 aa17.68■□□□□ 0.42
CAPN1-209ENST00000527469 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
CAPN1-209ENST00000527469 QSER1Q2KHR3 1735 aa17.67■□□□□ 0.42
CAPN1-209ENST00000527469 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
CAPN1-209ENST00000527469 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
CAPN1-209ENST00000527469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.66■□□□□ 0.42
CAPN1-209ENST00000527469 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
CAPN1-209ENST00000527469 SSFA2P28290 1259 aa17.66■□□□□ 0.42
CAPN1-209ENST00000527469 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-209ENST00000527469 SLC4A9Q96Q91 983 aa17.66■□□□□ 0.42
CAPN1-209ENST00000527469 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
CAPN1-209ENST00000527469 RTCBQ9Y3I0 505 aaKnown RBP17.66■□□□□ 0.42
CAPN1-209ENST00000527469 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
CAPN1-209ENST00000527469 CNTNAP4Q9C0A0 1308 aa17.65■□□□□ 0.42
CAPN1-209ENST00000527469 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
CAPN1-209ENST00000527469 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
CAPN1-209ENST00000527469 RC3H1Q5TC82 1133 aaKnown RBP17.64■□□□□ 0.41
CAPN1-209ENST00000527469 ZNF790Q6PG37 636 aa17.64■□□□□ 0.41
CAPN1-209ENST00000527469 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
CAPN1-209ENST00000527469 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.41
CAPN1-209ENST00000527469 PTGER2P43116 358 aa17.63■□□□□ 0.41
CAPN1-209ENST00000527469 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
CAPN1-209ENST00000527469 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
CAPN1-209ENST00000527469 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
CAPN1-209ENST00000527469 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
CAPN1-209ENST00000527469 DNAJC10Q8IXB1 793 aa17.63■□□□□ 0.41
CAPN1-209ENST00000527469 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
CAPN1-209ENST00000527469 RIPK4P57078 832 aa17.62■□□□□ 0.41
CAPN1-209ENST00000527469 VSIG10Q8N0Z9 540 aa17.62■□□□□ 0.41
CAPN1-209ENST00000527469 RUNDC1Q96C34 613 aa17.62■□□□□ 0.41
CAPN1-209ENST00000527469 ARXQ96QS3 562 aa17.62■□□□□ 0.41
CAPN1-209ENST00000527469 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
CAPN1-209ENST00000527469 STARD3NLO95772 234 aa17.61■□□□□ 0.41
CAPN1-209ENST00000527469 ADRA2BP18089 450 aa17.61■□□□□ 0.41
CAPN1-209ENST00000527469 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-209ENST00000527469 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
CAPN1-209ENST00000527469 KLHL34Q8N239 644 aa17.61■□□□□ 0.41
CAPN1-209ENST00000527469 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
CAPN1-209ENST00000527469 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
CAPN1-209ENST00000527469 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
CAPN1-209ENST00000527469 RFC4P35249 363 aa17.6■□□□□ 0.41
CAPN1-209ENST00000527469 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
CAPN1-209ENST00000527469 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
CAPN1-209ENST00000527469 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-209ENST00000527469 TEX13AQ9BXU3 409 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-209ENST00000527469 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
CAPN1-209ENST00000527469 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-209ENST00000527469 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
CAPN1-209ENST00000527469 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
CAPN1-209ENST00000527469 AMIGO3Q86WK7 504 aa17.59■□□□□ 0.41
CAPN1-209ENST00000527469 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
CAPN1-209ENST00000527469 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
CAPN1-209ENST00000527469 SIPA1L3O60292 1781 aaPredicted RBP17.58■□□□□ 0.41
CAPN1-209ENST00000527469 TJP1Q07157 1748 aa17.58■□□□□ 0.41
CAPN1-209ENST00000527469 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
CAPN1-209ENST00000527469 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
CAPN1-209ENST00000527469 THUMPD2Q9BTF0 503 aaKnown RBP17.58■□□□□ 0.4
CAPN1-209ENST00000527469 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
CAPN1-209ENST00000527469 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-209ENST00000527469 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
CAPN1-209ENST00000527469 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
CAPN1-209ENST00000527469 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
CAPN1-209ENST00000527469 KCNQ3O43525 872 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms