RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 PHKG2P15735 406 aa23.25■■□□□ 1.31
LTBP3-208ENST00000527339 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
LTBP3-208ENST00000527339 MYBBP1AQ9BQG0 1328 aaKnown RBP23.23■■□□□ 1.31
LTBP3-208ENST00000527339 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
LTBP3-208ENST00000527339 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
LTBP3-208ENST00000527339 HSP90AB1P08238 724 aaKnown RBP23.2■■□□□ 1.3
LTBP3-208ENST00000527339 AMIGO3Q86WK7 504 aa23.2■■□□□ 1.3
LTBP3-208ENST00000527339 PRKRIP1Q9H875 184 aaPredicted RBP23.2■■□□□ 1.3
LTBP3-208ENST00000527339 MSH5O43196 834 aa23.19■■□□□ 1.3
LTBP3-208ENST00000527339 C1orf141Q5JVX7 400 aa23.19■■□□□ 1.3
LTBP3-208ENST00000527339 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
LTBP3-208ENST00000527339 SCN11AQ9UI33 1791 aa23.18■■□□□ 1.3
LTBP3-208ENST00000527339 C5P01031 1676 aa23.17■■□□□ 1.3
LTBP3-208ENST00000527339 U2AF1L5P0DN76 240 aaPredicted RBP23.17■■□□□ 1.3
LTBP3-208ENST00000527339 U2AF1Q01081 240 aaKnown RBP eCLIP23.17■■□□□ 1.3
LTBP3-208ENST00000527339 DCAF5Q96JK2 942 aa23.17■■□□□ 1.3
LTBP3-208ENST00000527339 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
LTBP3-208ENST00000527339 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
LTBP3-208ENST00000527339 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
LTBP3-208ENST00000527339 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
LTBP3-208ENST00000527339 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
LTBP3-208ENST00000527339 GIGYF1O75420 1035 aaPredicted RBP23.14■■□□□ 1.29
LTBP3-208ENST00000527339 FCHSD2O94868 740 aa23.14■■□□□ 1.29
LTBP3-208ENST00000527339 MTHFSDQ2M296 383 aaKnown RBP23.14■■□□□ 1.29
LTBP3-208ENST00000527339 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
LTBP3-208ENST00000527339 ERVV-2B6SEH9 535 aa23.13■■□□□ 1.29
LTBP3-208ENST00000527339 PRKAR2BP31323 418 aa23.13■■□□□ 1.29
LTBP3-208ENST00000527339 TMOD3Q9NYL9 352 aa23.13■■□□□ 1.29
LTBP3-208ENST00000527339 ADAMTS7Q9UKP4 1686 aa23.12■■□□□ 1.29
LTBP3-208ENST00000527339 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
LTBP3-208ENST00000527339 PIGBQ92521 554 aa23.11■■□□□ 1.29
LTBP3-208ENST00000527339 C4BP0C0L5 1744 aa23.09■■□□□ 1.29
LTBP3-208ENST00000527339 SMARCC1Q92922 1105 aaPredicted RBP23.09■■□□□ 1.29
LTBP3-208ENST00000527339 GRIN3BO60391 1043 aa23.08■■□□□ 1.29
LTBP3-208ENST00000527339 PHACTR3Q96KR7 559 aa23.08■■□□□ 1.29
LTBP3-208ENST00000527339 CABP4P57796 275 aa23.07■■□□□ 1.28
LTBP3-208ENST00000527339 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
LTBP3-208ENST00000527339 MRC1P22897 1456 aa23.06■■□□□ 1.28
LTBP3-208ENST00000527339 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
LTBP3-208ENST00000527339 UBR3Q6ZT12 1888 aa23.06■■□□□ 1.28
LTBP3-208ENST00000527339 ATP10DQ9P241 1426 aa23.06■■□□□ 1.28
LTBP3-208ENST00000527339 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
LTBP3-208ENST00000527339 NEFMP07197 916 aa23.05■■□□□ 1.28
LTBP3-208ENST00000527339 WWC3Q9ULE0 1092 aa23.05■■□□□ 1.28
LTBP3-208ENST00000527339 GNAT3A8MTJ3 354 aa23.04■■□□□ 1.28
LTBP3-208ENST00000527339 ANP32CO43423 234 aa23.04■■□□□ 1.28
LTBP3-208ENST00000527339 LGR6Q9HBX8 967 aa23.04■■□□□ 1.28
LTBP3-208ENST00000527339 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
LTBP3-208ENST00000527339 PHF14O94880 888 aa23.03■■□□□ 1.28
LTBP3-208ENST00000527339 LINC00116Q8NCU8 138 aa23.03■■□□□ 1.28
LTBP3-208ENST00000527339 FLAD1Q8NFF5 587 aa23.03■■□□□ 1.28
LTBP3-208ENST00000527339 ASAP1Q9ULH1 1129 aa23.03■■□□□ 1.28
LTBP3-208ENST00000527339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.02■■□□□ 1.28
LTBP3-208ENST00000527339 HMGB2P26583 209 aaKnown RBP23.02■■□□□ 1.28
LTBP3-208ENST00000527339 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
LTBP3-208ENST00000527339 PLEKHF1Q96S99 279 aa23.02■■□□□ 1.28
LTBP3-208ENST00000527339 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
LTBP3-208ENST00000527339 ATG3Q9NT62 314 aa23.02■■□□□ 1.28
LTBP3-208ENST00000527339 ZNF831Q5JPB2 1677 aa23.02■■□□□ 1.28
LTBP3-208ENST00000527339 ADCY9O60503 1353 aa23.01■■□□□ 1.27
LTBP3-208ENST00000527339 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
LTBP3-208ENST00000527339 ITPK1Q13572 414 aa23.01■■□□□ 1.27
LTBP3-208ENST00000527339 AK7Q96M32 723 aa23.01■■□□□ 1.27
LTBP3-208ENST00000527339 WDR43Q15061 677 aaKnown RBP eCLIP23■■□□□ 1.27
LTBP3-208ENST00000527339 LOC102724428A0A0B4J2F2 783 aa22.99■■□□□ 1.27
LTBP3-208ENST00000527339 SIK1P57059 783 aa22.99■■□□□ 1.27
LTBP3-208ENST00000527339 MAPK8IP3Q9UPT6 1336 aa22.99■■□□□ 1.27
LTBP3-208ENST00000527339 IL17REQ8NFR9 667 aa22.98■■□□□ 1.27
LTBP3-208ENST00000527339 CEMIPQ8WUJ3 1361 aa22.98■■□□□ 1.27
LTBP3-208ENST00000527339 HTATSF1O43719 755 aaKnown RBP22.96■■□□□ 1.27
LTBP3-208ENST00000527339 TEFQ10587 303 aa22.96■■□□□ 1.27
LTBP3-208ENST00000527339 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
LTBP3-208ENST00000527339 RTF1Q92541 710 aaKnown RBP22.96■■□□□ 1.27
LTBP3-208ENST00000527339 UBR2Q8IWV8 1755 aa22.94■■□□□ 1.26
LTBP3-208ENST00000527339 CICQ96RK0 1608 aaPredicted RBP22.94■■□□□ 1.26
LTBP3-208ENST00000527339 SSFA2P28290 1259 aa22.94■■□□□ 1.26
LTBP3-208ENST00000527339 NFE2L2Q16236 605 aa22.94■■□□□ 1.26
LTBP3-208ENST00000527339 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
LTBP3-208ENST00000527339 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
LTBP3-208ENST00000527339 SLC4A9Q96Q91 983 aa22.93■■□□□ 1.26
LTBP3-208ENST00000527339 RBM42Q9BTD8 480 aaKnown RBP22.93■■□□□ 1.26
LTBP3-208ENST00000527339 GPBP1L1Q9HC44 474 aaPredicted RBP22.93■■□□□ 1.26
LTBP3-208ENST00000527339 ADAMTS8Q9UP79 889 aa22.93■■□□□ 1.26
LTBP3-208ENST00000527339 GNPATO15228 680 aa22.92■■□□□ 1.26
LTBP3-208ENST00000527339 MCM10Q7L590 875 aa22.91■■□□□ 1.26
LTBP3-208ENST00000527339 PTCD1O75127 700 aaKnown RBP22.9■■□□□ 1.26
LTBP3-208ENST00000527339 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
LTBP3-208ENST00000527339 RUNDC1Q96C34 613 aa22.9■■□□□ 1.26
LTBP3-208ENST00000527339 KCPQ6ZWJ8 1503 aa22.9■■□□□ 1.26
LTBP3-208ENST00000527339 TJP1Q07157 1748 aa22.9■■□□□ 1.26
LTBP3-208ENST00000527339 KIAA1551Q9HCM1 1747 aa22.9■■□□□ 1.26
LTBP3-208ENST00000527339 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
LTBP3-208ENST00000527339 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.25
LTBP3-208ENST00000527339 MMP10P09238 476 aa22.88■■□□□ 1.25
LTBP3-208ENST00000527339 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
LTBP3-208ENST00000527339 PXDNLA1KZ92 1463 aa22.87■■□□□ 1.25
LTBP3-208ENST00000527339 IFFO2Q5TF58 517 aa22.87■■□□□ 1.25
LTBP3-208ENST00000527339 TTC5Q8N0Z6 440 aa22.87■■□□□ 1.25
LTBP3-208ENST00000527339 MRS2Q9HD23 443 aa22.87■■□□□ 1.25
LTBP3-208ENST00000527339 KIF3CO14782 793 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms