RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 BAG6P46379 1132 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 CABP4P57796 275 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 EN1Q05925 392 aaPredicted RBP21.98■■□□□ 1.11
SMCO4-204ENST00000527149 SF3B2Q13435 895 aaKnown RBP21.98■■□□□ 1.11
SMCO4-204ENST00000527149 DCTN1Q14203 1278 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 MCM10Q7L590 875 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 FAM9BQ8IZU0 186 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 RIPK4P57078 832 aa21.97■■□□□ 1.11
SMCO4-204ENST00000527149 NFATC2IPQ8NCF5 419 aa21.97■■□□□ 1.11
SMCO4-204ENST00000527149 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
SMCO4-204ENST00000527149 PALLDQ8WX93 1383 aa21.96■■□□□ 1.11
SMCO4-204ENST00000527149 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
SMCO4-204ENST00000527149 PROM2Q8N271 834 aa21.95■■□□□ 1.1
SMCO4-204ENST00000527149 THUMPD2Q9BTF0 503 aaKnown RBP21.95■■□□□ 1.1
SMCO4-204ENST00000527149 ASAP1Q9ULH1 1129 aa21.95■■□□□ 1.1
SMCO4-204ENST00000527149 KCPQ6ZWJ8 1503 aa21.95■■□□□ 1.1
SMCO4-204ENST00000527149 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
SMCO4-204ENST00000527149 KDM3BQ7LBC6 1761 aa21.94■■□□□ 1.1
SMCO4-204ENST00000527149 EZH2Q15910 746 aaKnown RBP21.94■■□□□ 1.1
SMCO4-204ENST00000527149 RTF1Q92541 710 aaKnown RBP21.94■■□□□ 1.1
SMCO4-204ENST00000527149 ATG3Q9NT62 314 aa21.94■■□□□ 1.1
SMCO4-204ENST00000527149 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
SMCO4-204ENST00000527149 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
SMCO4-204ENST00000527149 LMOD3Q0VAK6 560 aa21.91■■□□□ 1.1
SMCO4-204ENST00000527149 TEFQ10587 303 aa21.91■■□□□ 1.1
SMCO4-204ENST00000527149 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
SMCO4-204ENST00000527149 TJP1Q07157 1748 aa21.9■■□□□ 1.1
SMCO4-204ENST00000527149 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
SMCO4-204ENST00000527149 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
SMCO4-204ENST00000527149 C5P01031 1676 aa21.9■■□□□ 1.1
SMCO4-204ENST00000527149 LRRC4BQ9NT99 713 aa21.89■■□□□ 1.09
SMCO4-204ENST00000527149 COL5A3P25940 1745 aaPredicted RBP21.89■■□□□ 1.09
SMCO4-204ENST00000527149 SENP3-EIF4A1A0A087X0R7 540 aa21.88■■□□□ 1.09
SMCO4-204ENST00000527149 SLC39A6Q13433 755 aa21.88■■□□□ 1.09
SMCO4-204ENST00000527149 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
SMCO4-204ENST00000527149 CCDC27Q2M243 656 aa21.87■■□□□ 1.09
SMCO4-204ENST00000527149 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
SMCO4-204ENST00000527149 SIK1P57059 783 aa21.86■■□□□ 1.09
SMCO4-204ENST00000527149 SLC27A3Q5K4L6 730 aa21.86■■□□□ 1.09
SMCO4-204ENST00000527149 KCNQ4P56696 695 aa21.85■■□□□ 1.09
SMCO4-204ENST00000527149 TAF7Q15545 349 aaPredicted RBP21.85■■□□□ 1.09
SMCO4-204ENST00000527149 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
SMCO4-204ENST00000527149 BTBD11A6QL63 1104 aa21.84■■□□□ 1.09
SMCO4-204ENST00000527149 KCNQ3O43525 872 aa21.84■■□□□ 1.09
SMCO4-204ENST00000527149 CCNL1Q9UK58 526 aaPredicted RBP21.84■■□□□ 1.09
SMCO4-204ENST00000527149 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.09
SMCO4-204ENST00000527149 ITPK1Q13572 414 aa21.83■■□□□ 1.09
SMCO4-204ENST00000527149 WWC1Q8IX03 1113 aa21.83■■□□□ 1.09
SMCO4-204ENST00000527149 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
SMCO4-204ENST00000527149 C4BP0C0L5 1744 aa21.83■■□□□ 1.08
SMCO4-204ENST00000527149 MIS18AQ9NYP9 233 aa21.82■■□□□ 1.08
SMCO4-204ENST00000527149 ZNF521Q96K83 1311 aa21.81■■□□□ 1.08
SMCO4-204ENST00000527149 MYH14Q7Z406 1995 aaKnown RBP21.81■■□□□ 1.08
SMCO4-204ENST00000527149 PTCD1O75127 700 aaKnown RBP21.81■■□□□ 1.08
SMCO4-204ENST00000527149 ZNF496Q96IT1 587 aaPredicted RBP21.81■■□□□ 1.08
SMCO4-204ENST00000527149 HEG1Q9ULI3 1381 aa21.8■■□□□ 1.08
SMCO4-204ENST00000527149 ZNF853P0CG23 659 aa21.8■■□□□ 1.08
SMCO4-204ENST00000527149 NGEFQ8N5V2 710 aa21.8■■□□□ 1.08
SMCO4-204ENST00000527149 BABAM1Q9NWV8 329 aa21.8■■□□□ 1.08
SMCO4-204ENST00000527149 CHL1O00533 1208 aa21.79■■□□□ 1.08
SMCO4-204ENST00000527149 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
SMCO4-204ENST00000527149 LINC00116Q8NCU8 138 aa21.79■■□□□ 1.08
SMCO4-204ENST00000527149 RBM42Q9BTD8 480 aaKnown RBP21.79■■□□□ 1.08
SMCO4-204ENST00000527149 QSER1Q2KHR3 1735 aa21.79■■□□□ 1.08
SMCO4-204ENST00000527149 LAMB4A4D0S4 1761 aa21.79■■□□□ 1.08
SMCO4-204ENST00000527149 UBR3Q6ZT12 1888 aa21.78■■□□□ 1.08
SMCO4-204ENST00000527149 ZNF827Q17R98 1081 aa21.78■■□□□ 1.08
SMCO4-204ENST00000527149 ATP6V1AP38606 617 aa21.77■■□□□ 1.08
SMCO4-204ENST00000527149 VSIG10Q8N0Z9 540 aa21.77■■□□□ 1.08
SMCO4-204ENST00000527149 AKT1S1Q96B36 256 aa21.77■■□□□ 1.08
SMCO4-204ENST00000527149 CFAP44Q96MT7 982 aa21.77■■□□□ 1.08
SMCO4-204ENST00000527149 IFT57Q9NWB7 429 aa21.77■■□□□ 1.08
SMCO4-204ENST00000527149 TSPYL4Q9UJ04 414 aa21.77■■□□□ 1.08
SMCO4-204ENST00000527149 SALL2Q9Y467 1007 aaPredicted RBP21.77■■□□□ 1.08
SMCO4-204ENST00000527149 EIF4A1P60842 406 aaKnown RBP21.76■■□□□ 1.07
SMCO4-204ENST00000527149 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
SMCO4-204ENST00000527149 IL16Q14005 1332 aa21.76■■□□□ 1.07
SMCO4-204ENST00000527149 CALD1Q05682 793 aaKnown RBP21.75■■□□□ 1.07
SMCO4-204ENST00000527149 DNAJC10Q8IXB1 793 aa21.75■■□□□ 1.07
SMCO4-204ENST00000527149 CNTNAP4Q9C0A0 1308 aa21.74■■□□□ 1.07
SMCO4-204ENST00000527149 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
SMCO4-204ENST00000527149 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
SMCO4-204ENST00000527149 MBIPQ9NS73 344 aa21.73■■□□□ 1.07
SMCO4-204ENST00000527149 PRAMEF22A3QJZ6 481 aa21.72■■□□□ 1.07
SMCO4-204ENST00000527149 GNAI1P63096 354 aa21.72■■□□□ 1.07
SMCO4-204ENST00000527149 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
SMCO4-204ENST00000527149 CYP19A1P11511 503 aaPredicted RBP21.71■■□□□ 1.07
SMCO4-204ENST00000527149 SLC15A2Q16348 729 aa21.71■■□□□ 1.07
SMCO4-204ENST00000527149 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
SMCO4-204ENST00000527149 LAS1LQ9Y4W2 734 aaKnown RBP21.71■■□□□ 1.07
SMCO4-204ENST00000527149 GIGYF1O75420 1035 aaPredicted RBP21.7■■□□□ 1.06
SMCO4-204ENST00000527149 SRCAPQ6ZRS2 3230 aa21.7■■□□□ 1.06
SMCO4-204ENST00000527149 SNRPA1P09661 255 aaKnown RBP21.69■■□□□ 1.06
SMCO4-204ENST00000527149 CRKLP46109 303 aaKnown RBP21.69■■□□□ 1.06
SMCO4-204ENST00000527149 KRT24Q2M2I5 525 aa21.69■■□□□ 1.06
SMCO4-204ENST00000527149 RC3H1Q5TC82 1133 aaKnown RBP21.69■■□□□ 1.06
SMCO4-204ENST00000527149 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
SMCO4-204ENST00000527149 STK32BQ9NY57 414 aa21.69■■□□□ 1.06
SMCO4-204ENST00000527149 C4AP0C0L4 1744 aa21.69■■□□□ 1.06
SMCO4-204ENST00000527149 R3HDM1Q15032 1099 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms