RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
SCN3B-203ENST00000527125 ST18O60284 1047 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 LMOD3Q0VAK6 560 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-203ENST00000527125 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 SYCE3A1L190 88 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 PDE1AP54750 535 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 UVSSAQ2YD98 709 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 GGT6Q6P531 493 aa11.36□□□□□ -0.59
SCN3B-203ENST00000527125 MCM2P49736 904 aa11.35□□□□□ -0.59
SCN3B-203ENST00000527125 KRT24Q2M2I5 525 aa11.35□□□□□ -0.59
SCN3B-203ENST00000527125 FAM83GA6ND36 823 aa11.35□□□□□ -0.59
SCN3B-203ENST00000527125 REC8O95072 547 aa11.35□□□□□ -0.59
SCN3B-203ENST00000527125 UTP14CQ5TAP6 766 aaKnown RBP11.35□□□□□ -0.59
SCN3B-203ENST00000527125 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
SCN3B-203ENST00000527125 HMOX1P09601 288 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 ESYT1Q9BSJ8 1104 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 PALD1Q9ULE6 856 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCN3B-203ENST00000527125 PIBF1Q8WXW3 757 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 MEIS3Q99687 375 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
SCN3B-203ENST00000527125 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
SCN3B-203ENST00000527125 AOX1Q06278 1338 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 KDRP35968 1356 aa11.34□□□□□ -0.59
SCN3B-203ENST00000527125 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
SCN3B-203ENST00000527125 UBR1Q8IWV7 1749 aa11.33□□□□□ -0.6
SCN3B-203ENST00000527125 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN3B-203ENST00000527125 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
SCN3B-203ENST00000527125 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
SCN3B-203ENST00000527125 ANP32BQ92688 251 aaKnown RBP11.33□□□□□ -0.6
SCN3B-203ENST00000527125 TTC14Q96N46 770 aa11.33□□□□□ -0.6
SCN3B-203ENST00000527125 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
SCN3B-203ENST00000527125 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
SCN3B-203ENST00000527125 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
SCN3B-203ENST00000527125 IL25Q9H293 177 aa11.32□□□□□ -0.6
SCN3B-203ENST00000527125 GADD45BO75293 160 aaPredicted RBP11.31□□□□□ -0.6
SCN3B-203ENST00000527125 CHMLP26374 656 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 STK26Q9P289 416 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 NME9Q86XW9 330 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 DMTNQ08495 405 aa11.31□□□□□ -0.6
SCN3B-203ENST00000527125 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-203ENST00000527125 ELL2O00472 640 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-203ENST00000527125 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
SCN3B-203ENST00000527125 AP5Z1O43299 807 aa11.3□□□□□ -0.6
SCN3B-203ENST00000527125 HSPA4P34932 840 aa11.3□□□□□ -0.6
SCN3B-203ENST00000527125 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
SCN3B-203ENST00000527125 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
SCN3B-203ENST00000527125 KCNB2Q92953 911 aa11.29□□□□□ -0.6
SCN3B-203ENST00000527125 RGPD8O14715 1765 aaPredicted RBP11.29□□□□□ -0.6
SCN3B-203ENST00000527125 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
SCN3B-203ENST00000527125 CTIFO43310 598 aaKnown RBP11.29□□□□□ -0.6
SCN3B-203ENST00000527125 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
SCN3B-203ENST00000527125 ANKRD7Q92527 254 aa11.29□□□□□ -0.6
SCN3B-203ENST00000527125 METP08581 1390 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
SCN3B-203ENST00000527125 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
SCN3B-203ENST00000527125 LMO7Q8WWI1 1683 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
SCN3B-203ENST00000527125 PHRF1Q9P1Y6 1649 aaKnown RBP11.27□□□□□ -0.6
SCN3B-203ENST00000527125 NEK4P51957 841 aa11.27□□□□□ -0.6
SCN3B-203ENST00000527125 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
SCN3B-203ENST00000527125 G2E3Q7L622 706 aa11.27□□□□□ -0.61
SCN3B-203ENST00000527125 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
SCN3B-203ENST00000527125 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
SCN3B-203ENST00000527125 NOLC1Q14978 699 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCN3B-203ENST00000527125 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
SCN3B-203ENST00000527125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCN3B-203ENST00000527125 SRCIN1Q9C0H9 1055 aa11.27□□□□□ -0.61
SCN3B-203ENST00000527125 RAPGEF3O95398 923 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 MX1P20591 662 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 CCT4P50991 539 aaKnown RBP11.26□□□□□ -0.61
SCN3B-203ENST00000527125 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
SCN3B-203ENST00000527125 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 KIAA1524Q8TCG1 905 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 ADAMTS7Q9UKP4 1686 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 SOS1Q07889 1333 aaPredicted RBP11.26□□□□□ -0.61
SCN3B-203ENST00000527125 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
SCN3B-203ENST00000527125 USP6P35125 1406 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 DDX60Q8IY21 1712 aaKnown RBP11.25□□□□□ -0.61
SCN3B-203ENST00000527125 NCLP19338 710 aaKnown RBP11.25□□□□□ -0.61
SCN3B-203ENST00000527125 POLA2Q14181 598 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 WDR33Q9C0J8 1336 aaKnown RBP11.25□□□□□ -0.61
SCN3B-203ENST00000527125 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 KDM4AO75164 1064 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 RAD50Q92878 1312 aa11.25□□□□□ -0.61
SCN3B-203ENST00000527125 PDE4CQ08493 712 aa11.24□□□□□ -0.61
SCN3B-203ENST00000527125 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms