RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ERBB4Q15303 1308 aa14.33□□□□□ -0.12
LINC01001-201ENST00000526704 LTN1O94822 1766 aa14.33□□□□□ -0.12
LINC01001-201ENST00000526704 ST18O60284 1047 aa14.32□□□□□ -0.12
LINC01001-201ENST00000526704 GNAI2P04899 355 aa14.32□□□□□ -0.12
LINC01001-201ENST00000526704 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
LINC01001-201ENST00000526704 MCTP1Q6DN14 999 aa14.31□□□□□ -0.12
LINC01001-201ENST00000526704 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
LINC01001-201ENST00000526704 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
LINC01001-201ENST00000526704 PXDNLA1KZ92 1463 aa14.31□□□□□ -0.12
LINC01001-201ENST00000526704 AMOTL2Q9Y2J4 779 aa14.31□□□□□ -0.12
LINC01001-201ENST00000526704 AMPHP49418 695 aa14.3□□□□□ -0.12
LINC01001-201ENST00000526704 FLIIQ13045 1269 aa14.3□□□□□ -0.12
LINC01001-201ENST00000526704 TSHZ3Q63HK5 1081 aa14.3□□□□□ -0.12
LINC01001-201ENST00000526704 STK31Q9BXU1 1019 aa14.3□□□□□ -0.12
LINC01001-201ENST00000526704 CWC22Q9HCG8 908 aaKnown RBP14.3□□□□□ -0.12
LINC01001-201ENST00000526704 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
LINC01001-201ENST00000526704 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
LINC01001-201ENST00000526704 NGDNQ8NEJ9 315 aaKnown RBP14.29□□□□□ -0.12
LINC01001-201ENST00000526704 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
LINC01001-201ENST00000526704 ESPNB1AK53 854 aa14.29□□□□□ -0.12
LINC01001-201ENST00000526704 ZDHHC9Q9Y397 364 aa14.29□□□□□ -0.12
LINC01001-201ENST00000526704 FER1L4A9Z1Z3 1794 aa14.29□□□□□ -0.12
LINC01001-201ENST00000526704 FKBP5Q13451 457 aaPredicted RBP14.29□□□□□ -0.12
LINC01001-201ENST00000526704 LRRCC1Q9C099 1032 aa14.29□□□□□ -0.12
LINC01001-201ENST00000526704 KDM3BQ7LBC6 1761 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 CCDC30Q5VVM6 783 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 ESYT1Q9BSJ8 1104 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 MAP3K5Q99683 1374 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 GNAI3P08754 354 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 MX1P20591 662 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 ZNF445P59923 1031 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
LINC01001-201ENST00000526704 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.13
LINC01001-201ENST00000526704 CEBPAP49715 358 aaPredicted RBP14.27□□□□□ -0.13
LINC01001-201ENST00000526704 ATP8B2P98198 1209 aa14.27□□□□□ -0.13
LINC01001-201ENST00000526704 NECTIN2Q92692 538 aa14.27□□□□□ -0.13
LINC01001-201ENST00000526704 ANKARQ7Z5J8 1434 aa14.27□□□□□ -0.13
LINC01001-201ENST00000526704 HOXC9P31274 260 aa14.27□□□□□ -0.13
LINC01001-201ENST00000526704 TBX22Q9Y458 520 aa14.27□□□□□ -0.13
LINC01001-201ENST00000526704 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
LINC01001-201ENST00000526704 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
LINC01001-201ENST00000526704 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
LINC01001-201ENST00000526704 TRIM44Q96DX7 344 aaPredicted RBP14.26□□□□□ -0.13
LINC01001-201ENST00000526704 PPP1R9BQ96SB3 815 aa14.26□□□□□ -0.13
LINC01001-201ENST00000526704 RGPD2P0DJD1 1756 aa14.26□□□□□ -0.13
LINC01001-201ENST00000526704 ZSCAN23Q3MJ62 389 aa14.26□□□□□ -0.13
LINC01001-201ENST00000526704 IL17REQ8NFR9 667 aa14.26□□□□□ -0.13
LINC01001-201ENST00000526704 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
LINC01001-201ENST00000526704 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
LINC01001-201ENST00000526704 CRYBG1Q9Y4K1 1723 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
LINC01001-201ENST00000526704 NLRP6P59044 892 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 PALD1Q9ULE6 856 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 CHMLP26374 656 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 NEK4P51957 841 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 TMX3Q96JJ7 454 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
LINC01001-201ENST00000526704 CHAMP1Q96JM3 812 aa14.24□□□□□ -0.13
LINC01001-201ENST00000526704 NAP1L5Q96NT1 182 aaPredicted RBP14.24□□□□□ -0.13
LINC01001-201ENST00000526704 TCHHQ07283 1943 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 PRPF40AO75400 957 aaKnown RBP14.23□□□□□ -0.13
LINC01001-201ENST00000526704 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
LINC01001-201ENST00000526704 NUTM2GQ5VZR2 741 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 UNC5CLQ8IV45 518 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 RILPL2Q969X0 211 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
LINC01001-201ENST00000526704 AOX1Q06278 1338 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 TRIM6-TRIM34B2RNG4 842 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 ANAPC15P60006 121 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 CUL4AQ13619 759 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
LINC01001-201ENST00000526704 IL17RAQ96F46 866 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 PKNOX2Q96KN3 472 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 SRCIN1Q9C0H9 1055 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 MCCP23508 829 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 MCM2P49736 904 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 GLIPR1L2Q4G1C9 344 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 ANO2Q9NQ90 1003 aa14.22□□□□□ -0.13
LINC01001-201ENST00000526704 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
LINC01001-201ENST00000526704 NFAT5O94916 1531 aa14.21□□□□□ -0.14
LINC01001-201ENST00000526704 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.14
LINC01001-201ENST00000526704 SSH3Q8TE77 659 aa14.21□□□□□ -0.14
LINC01001-201ENST00000526704 LTV1Q96GA3 475 aaPredicted RBP14.21□□□□□ -0.14
LINC01001-201ENST00000526704 IL25Q9H293 177 aa14.21□□□□□ -0.14
LINC01001-201ENST00000526704 RBSNQ9H1K0 784 aa14.2□□□□□ -0.14
LINC01001-201ENST00000526704 PHAXQ9H814 394 aaKnown RBP14.2□□□□□ -0.14
LINC01001-201ENST00000526704 CEMIPQ8WUJ3 1361 aa14.2□□□□□ -0.14
LINC01001-201ENST00000526704 BRD1O95696 1058 aa14.2□□□□□ -0.14
LINC01001-201ENST00000526704 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
LINC01001-201ENST00000526704 FOXD4L5Q5VV16 416 aaPredicted RBP14.2□□□□□ -0.14
LINC01001-201ENST00000526704 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
LINC01001-201ENST00000526704 FOXD4L4Q8WXT5 416 aaPredicted RBP14.2□□□□□ -0.14
LINC01001-201ENST00000526704 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
LINC01001-201ENST00000526704 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
LINC01001-201ENST00000526704 TMEM63CQ9P1W3 806 aa14.19□□□□□ -0.14
LINC01001-201ENST00000526704 NSFL1CQ9UNZ2 370 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms