RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 USHBP1Q8N6Y0 703 aa25.14■■□□□ 1.61
SMIM3-201ENST00000526627 PHF8Q9UPP1 1060 aa25.14■■□□□ 1.61
SMIM3-201ENST00000526627 EXOC6BQ9Y2D4 811 aa25.14■■□□□ 1.61
SMIM3-201ENST00000526627 CHD2O14647 1828 aaKnown RBP25.13■■□□□ 1.61
SMIM3-201ENST00000526627 TUBGCP6Q96RT7 1819 aa25.13■■□□□ 1.61
SMIM3-201ENST00000526627 PNMA6EA0A0J9YXQ4 647 aa25.13■■□□□ 1.61
SMIM3-201ENST00000526627 GBP4Q96PP9 640 aa25.13■■□□□ 1.61
SMIM3-201ENST00000526627 NFAT5O94916 1531 aa25.13■■□□□ 1.61
SMIM3-201ENST00000526627 GNAI3P08754 354 aa25.12■■□□□ 1.61
SMIM3-201ENST00000526627 CASC1Q6TDU7 716 aa25.12■■□□□ 1.61
SMIM3-201ENST00000526627 ATP8B2P98198 1209 aa25.12■■□□□ 1.61
SMIM3-201ENST00000526627 PXDNLA1KZ92 1463 aa25.11■■□□□ 1.61
SMIM3-201ENST00000526627 IP6K1Q92551 441 aa25.11■■□□□ 1.61
SMIM3-201ENST00000526627 CEMIPQ8WUJ3 1361 aa25.1■■□□□ 1.61
SMIM3-201ENST00000526627 SSFA2P28290 1259 aa25.1■■□□□ 1.61
SMIM3-201ENST00000526627 IBTKQ9P2D0 1353 aaPredicted RBP25.09■■□□□ 1.61
SMIM3-201ENST00000526627 CLEC17AQ6ZS10 378 aa25.09■■□□□ 1.61
SMIM3-201ENST00000526627 MED1Q15648 1581 aaPredicted RBP25.09■■□□□ 1.61
SMIM3-201ENST00000526627 ERC2O15083 957 aa25.08■■□□□ 1.61
SMIM3-201ENST00000526627 C14orf37Q86TY3 774 aa25.08■■□□□ 1.61
SMIM3-201ENST00000526627 REC8O95072 547 aa25.08■■□□□ 1.61
SMIM3-201ENST00000526627 LRRCC1Q9C099 1032 aa25.08■■□□□ 1.61
SMIM3-201ENST00000526627 USP44Q9H0E7 712 aa25.08■■□□□ 1.61
SMIM3-201ENST00000526627 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
SMIM3-201ENST00000526627 TSHZ3Q63HK5 1081 aa25.07■■□□□ 1.6
SMIM3-201ENST00000526627 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
SMIM3-201ENST00000526627 ARXQ96QS3 562 aa25.07■■□□□ 1.6
SMIM3-201ENST00000526627 LRRFIP2Q9Y608 721 aaKnown RBP25.07■■□□□ 1.6
SMIM3-201ENST00000526627 FAM43AQ8N2R8 423 aa25.07■■□□□ 1.6
SMIM3-201ENST00000526627 RBM33Q96EV2 1170 aaKnown RBP25.07■■□□□ 1.6
SMIM3-201ENST00000526627 PHAXQ9H814 394 aaKnown RBP25.06■■□□□ 1.6
SMIM3-201ENST00000526627 HDGFL1Q5TGJ6 251 aa25.05■■□□□ 1.6
SMIM3-201ENST00000526627 PANK2Q9BZ23 570 aa25.05■■□□□ 1.6
SMIM3-201ENST00000526627 MX1P20591 662 aa25.03■■□□□ 1.6
SMIM3-201ENST00000526627 LGR6Q9HBX8 967 aa25.03■■□□□ 1.6
SMIM3-201ENST00000526627 KDM3BQ7LBC6 1761 aa25.03■■□□□ 1.6
SMIM3-201ENST00000526627 AK9Q5TCS8 1911 aa25.03■■□□□ 1.6
SMIM3-201ENST00000526627 RGPD2P0DJD1 1756 aa25.03■■□□□ 1.6
SMIM3-201ENST00000526627 CYP2E1P05181 493 aaPredicted RBP25.02■■□□□ 1.6
SMIM3-201ENST00000526627 EIF4A1P60842 406 aaKnown RBP25.02■■□□□ 1.6
SMIM3-201ENST00000526627 ANKLE2Q86XL3 938 aa25.02■■□□□ 1.6
SMIM3-201ENST00000526627 STAP2Q9UGK3 403 aa25.02■■□□□ 1.6
SMIM3-201ENST00000526627 PHRF1Q9P1Y6 1649 aaKnown RBP25.02■■□□□ 1.6
SMIM3-201ENST00000526627 SKOR2Q2VWA4 1001 aaPredicted RBP25.02■■□□□ 1.6
SMIM3-201ENST00000526627 PTMSP20962 102 aa25.01■■□□□ 1.59
SMIM3-201ENST00000526627 ADGRL3Q9HAR2 1447 aa25.01■■□□□ 1.59
SMIM3-201ENST00000526627 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
SMIM3-201ENST00000526627 BAG4O95429 457 aaKnown RBP25.01■■□□□ 1.59
SMIM3-201ENST00000526627 MRE11P49959 708 aa25.01■■□□□ 1.59
SMIM3-201ENST00000526627 ESYT1Q9BSJ8 1104 aa25.01■■□□□ 1.59
SMIM3-201ENST00000526627 ST18O60284 1047 aa25■■□□□ 1.59
SMIM3-201ENST00000526627 UBTFL1P0CB47 393 aaPredicted RBP25■■□□□ 1.59
SMIM3-201ENST00000526627 SSH3Q8TE77 659 aa25■■□□□ 1.59
SMIM3-201ENST00000526627 LMO7Q8WWI1 1683 aa24.99■■□□□ 1.59
SMIM3-201ENST00000526627 ISY1Q9ULR0 285 aaKnown RBP24.99■■□□□ 1.59
SMIM3-201ENST00000526627 ZNF142P52746 1687 aaPredicted RBP24.99■■□□□ 1.59
SMIM3-201ENST00000526627 KCNQ3O43525 872 aa24.98■■□□□ 1.59
SMIM3-201ENST00000526627 ESCO1Q5FWF5 840 aa24.98■■□□□ 1.59
SMIM3-201ENST00000526627 GRPEL1Q9HAV7 217 aa24.98■■□□□ 1.59
SMIM3-201ENST00000526627 PSME1Q06323 249 aa24.98■■□□□ 1.59
SMIM3-201ENST00000526627 CHMLP26374 656 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 GAS2L3Q86XJ1 694 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 HOXB7P09629 217 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 NUCB2P80303 420 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 PKP1Q13835 747 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 POLA2Q14181 598 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 ZGPATQ8N5A5 531 aaKnown RBP24.97■■□□□ 1.59
SMIM3-201ENST00000526627 KCNH5Q8NCM2 988 aa24.97■■□□□ 1.59
SMIM3-201ENST00000526627 LRRC59Q96AG4 307 aaKnown RBP24.97■■□□□ 1.59
SMIM3-201ENST00000526627 EIF2S2P20042 333 aaKnown RBP24.96■■□□□ 1.59
SMIM3-201ENST00000526627 SRCIN1Q9C0H9 1055 aa24.96■■□□□ 1.59
SMIM3-201ENST00000526627 UNC5CLQ8IV45 518 aa24.96■■□□□ 1.59
SMIM3-201ENST00000526627 CWC22Q9HCG8 908 aaKnown RBP24.96■■□□□ 1.59
SMIM3-201ENST00000526627 CHPF2Q9P2E5 772 aa24.96■■□□□ 1.59
SMIM3-201ENST00000526627 AOX1Q06278 1338 aa24.95■■□□□ 1.58
SMIM3-201ENST00000526627 PPP1R42Q7Z4L9 355 aa24.95■■□□□ 1.58
SMIM3-201ENST00000526627 AKAP4Q5JQC9 854 aa24.94■■□□□ 1.58
SMIM3-201ENST00000526627 RRAGDQ9NQL2 400 aaPredicted RBP24.94■■□□□ 1.58
SMIM3-201ENST00000526627 NCAPD2Q15021 1401 aa24.94■■□□□ 1.58
SMIM3-201ENST00000526627 BEND3Q5T5X7 828 aa24.94■■□□□ 1.58
SMIM3-201ENST00000526627 IL1RAPL2Q9NP60 686 aa24.94■■□□□ 1.58
SMIM3-201ENST00000526627 ZBTB7CA1YPR0 619 aa24.93■■□□□ 1.58
SMIM3-201ENST00000526627 RILPL2Q969X0 211 aa24.93■■□□□ 1.58
SMIM3-201ENST00000526627 GOLGA6L22H0YM25 854 aa24.92■■□□□ 1.58
SMIM3-201ENST00000526627 ZNF530Q6P9A1 599 aaPredicted RBP24.92■■□□□ 1.58
SMIM3-201ENST00000526627 PALD1Q9ULE6 856 aa24.92■■□□□ 1.58
SMIM3-201ENST00000526627 TRIM6-TRIM34B2RNG4 842 aa24.92■■□□□ 1.58
SMIM3-201ENST00000526627 NBPF7P0C2Y1 421 aaPredicted RBP24.92■■□□□ 1.58
SMIM3-201ENST00000526627 PXDNQ92626 1479 aa24.92■■□□□ 1.58
SMIM3-201ENST00000526627 SLIT3O75094 1523 aa24.91■■□□□ 1.58
SMIM3-201ENST00000526627 RAB11FIP3O75154 756 aa24.91■■□□□ 1.58
SMIM3-201ENST00000526627 ZDHHC9Q9Y397 364 aa24.91■■□□□ 1.58
SMIM3-201ENST00000526627 KLHL40Q2TBA0 621 aa24.91■■□□□ 1.58
SMIM3-201ENST00000526627 ARHGEF25Q86VW2 580 aa24.91■■□□□ 1.58
SMIM3-201ENST00000526627 DNAAF4Q8WXU2 420 aa24.91■■□□□ 1.58
SMIM3-201ENST00000526627 PI4KAP2A4QPH2 592 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 PLEKHO1Q53GL0 409 aaPredicted RBP24.9■■□□□ 1.58
SMIM3-201ENST00000526627 MPRIPQ6WCQ1 1025 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 PI4KAP1Q8N8J0 262 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 IL17RAQ96F46 866 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms