RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 ASAP1Q9ULH1 1129 aa22.89■■□□□ 1.25
LMX1B-203ENST00000526117 QSER1Q2KHR3 1735 aa22.88■■□□□ 1.25
LMX1B-203ENST00000526117 MAPK8IP3Q9UPT6 1336 aa22.88■■□□□ 1.25
LMX1B-203ENST00000526117 C5P01031 1676 aa22.88■■□□□ 1.25
LMX1B-203ENST00000526117 IL17REQ8NFR9 667 aa22.88■■□□□ 1.25
LMX1B-203ENST00000526117 ANO8Q9HCE9 1232 aaPredicted RBP22.88■■□□□ 1.25
LMX1B-203ENST00000526117 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
LMX1B-203ENST00000526117 TAF1LQ8IZX4 1826 aa22.87■■□□□ 1.25
LMX1B-203ENST00000526117 NFE2L2Q16236 605 aa22.87■■□□□ 1.25
LMX1B-203ENST00000526117 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
LMX1B-203ENST00000526117 DLG5Q8TDM6 1919 aa22.86■■□□□ 1.25
LMX1B-203ENST00000526117 LOC102724428A0A0B4J2F2 783 aa22.85■■□□□ 1.25
LMX1B-203ENST00000526117 SIK1P57059 783 aa22.85■■□□□ 1.25
LMX1B-203ENST00000526117 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
LMX1B-203ENST00000526117 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
LMX1B-203ENST00000526117 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
LMX1B-203ENST00000526117 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
LMX1B-203ENST00000526117 AKT1S1Q96B36 256 aa22.84■■□□□ 1.25
LMX1B-203ENST00000526117 STK32BQ9NY57 414 aa22.84■■□□□ 1.25
LMX1B-203ENST00000526117 TEFQ10587 303 aa22.83■■□□□ 1.25
LMX1B-203ENST00000526117 R3HDM1Q15032 1099 aaKnown RBP22.83■■□□□ 1.25
LMX1B-203ENST00000526117 CASZ1Q86V15 1759 aa22.83■■□□□ 1.24
LMX1B-203ENST00000526117 KCPQ6ZWJ8 1503 aa22.82■■□□□ 1.24
LMX1B-203ENST00000526117 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
LMX1B-203ENST00000526117 CCDC184Q52MB2 194 aa22.82■■□□□ 1.24
LMX1B-203ENST00000526117 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
LMX1B-203ENST00000526117 COL5A3P25940 1745 aaPredicted RBP22.81■■□□□ 1.24
LMX1B-203ENST00000526117 TMPOP42166 694 aaKnown RBP22.8■■□□□ 1.24
LMX1B-203ENST00000526117 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
LMX1B-203ENST00000526117 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
LMX1B-203ENST00000526117 LMOD3Q0VAK6 560 aa22.79■■□□□ 1.24
LMX1B-203ENST00000526117 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
LMX1B-203ENST00000526117 PSDA5PKW4 1024 aaPredicted RBP22.78■■□□□ 1.24
LMX1B-203ENST00000526117 KCNQ4P56696 695 aa22.78■■□□□ 1.24
LMX1B-203ENST00000526117 TJP1Q07157 1748 aa22.78■■□□□ 1.24
LMX1B-203ENST00000526117 MCM10Q7L590 875 aa22.78■■□□□ 1.24
LMX1B-203ENST00000526117 VSIG10Q8N0Z9 540 aa22.78■■□□□ 1.24
LMX1B-203ENST00000526117 LRP5O75197 1615 aa22.78■■□□□ 1.24
LMX1B-203ENST00000526117 TUBGCP6Q96RT7 1819 aa22.78■■□□□ 1.24
LMX1B-203ENST00000526117 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
LMX1B-203ENST00000526117 ITPK1Q13572 414 aa22.77■■□□□ 1.24
LMX1B-203ENST00000526117 RIPK4P57078 832 aa22.76■■□□□ 1.23
LMX1B-203ENST00000526117 ZNF790Q6PG37 636 aa22.76■■□□□ 1.23
LMX1B-203ENST00000526117 RC3H1Q5TC82 1133 aaKnown RBP22.75■■□□□ 1.23
LMX1B-203ENST00000526117 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
LMX1B-203ENST00000526117 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
LMX1B-203ENST00000526117 RBM42Q9BTD8 480 aaKnown RBP22.75■■□□□ 1.23
LMX1B-203ENST00000526117 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
LMX1B-203ENST00000526117 DCTN1Q14203 1278 aa22.74■■□□□ 1.23
LMX1B-203ENST00000526117 TAF7Q15545 349 aaPredicted RBP22.74■■□□□ 1.23
LMX1B-203ENST00000526117 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
LMX1B-203ENST00000526117 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
LMX1B-203ENST00000526117 CNTNAP4Q9C0A0 1308 aa22.74■■□□□ 1.23
LMX1B-203ENST00000526117 UBR3Q6ZT12 1888 aa22.73■■□□□ 1.23
LMX1B-203ENST00000526117 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
LMX1B-203ENST00000526117 PTCD1O75127 700 aaKnown RBP22.73■■□□□ 1.23
LMX1B-203ENST00000526117 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
LMX1B-203ENST00000526117 FLAD1Q8NFF5 587 aa22.72■■□□□ 1.23
LMX1B-203ENST00000526117 BABAM1Q9NWV8 329 aa22.72■■□□□ 1.23
LMX1B-203ENST00000526117 TFCP2L1Q9NZI6 479 aa22.72■■□□□ 1.23
LMX1B-203ENST00000526117 PNPLA7Q6ZV29 1317 aa22.72■■□□□ 1.23
LMX1B-203ENST00000526117 SRCAPQ6ZRS2 3230 aa22.71■■□□□ 1.23
LMX1B-203ENST00000526117 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
LMX1B-203ENST00000526117 HEG1Q9ULI3 1381 aa22.71■■□□□ 1.23
LMX1B-203ENST00000526117 SSFA2P28290 1259 aa22.7■■□□□ 1.22
LMX1B-203ENST00000526117 AK7Q96M32 723 aa22.7■■□□□ 1.22
LMX1B-203ENST00000526117 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
LMX1B-203ENST00000526117 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
LMX1B-203ENST00000526117 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
LMX1B-203ENST00000526117 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
LMX1B-203ENST00000526117 FMNL2Q96PY5 1086 aa22.69■■□□□ 1.22
LMX1B-203ENST00000526117 TEX13AQ9BXU3 409 aaPredicted RBP22.69■■□□□ 1.22
LMX1B-203ENST00000526117 APAF1O14727 1248 aa22.67■■□□□ 1.22
LMX1B-203ENST00000526117 ADRA2BP18089 450 aa22.66■■□□□ 1.22
LMX1B-203ENST00000526117 CCDC27Q2M243 656 aa22.66■■□□□ 1.22
LMX1B-203ENST00000526117 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
LMX1B-203ENST00000526117 PDGFDQ9GZP0 370 aaPredicted RBP22.66■■□□□ 1.22
LMX1B-203ENST00000526117 MTFR1LQ9H019 292 aa22.66■■□□□ 1.22
LMX1B-203ENST00000526117 RRP7AQ9Y3A4 280 aaKnown RBP22.66■■□□□ 1.22
LMX1B-203ENST00000526117 MYH14Q7Z406 1995 aaKnown RBP22.66■■□□□ 1.22
LMX1B-203ENST00000526117 CYP19A1P11511 503 aaPredicted RBP22.65■■□□□ 1.22
LMX1B-203ENST00000526117 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
LMX1B-203ENST00000526117 DNAJC10Q8IXB1 793 aa22.65■■□□□ 1.22
LMX1B-203ENST00000526117 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
LMX1B-203ENST00000526117 GNPATO15228 680 aa22.64■■□□□ 1.21
LMX1B-203ENST00000526117 RPS6KA4O75676 772 aa22.64■■□□□ 1.21
LMX1B-203ENST00000526117 NEUROD2Q15784 382 aa22.64■■□□□ 1.21
LMX1B-203ENST00000526117 COL23A1Q86Y22 540 aaPredicted RBP22.64■■□□□ 1.21
LMX1B-203ENST00000526117 SPON1Q9HCB6 807 aa22.64■■□□□ 1.21
LMX1B-203ENST00000526117 KCNQ3O43525 872 aa22.63■■□□□ 1.21
LMX1B-203ENST00000526117 STARD3NLO95772 234 aa22.63■■□□□ 1.21
LMX1B-203ENST00000526117 AMIGO3Q86WK7 504 aa22.63■■□□□ 1.21
LMX1B-203ENST00000526117 RTCBQ9Y3I0 505 aaKnown RBP22.63■■□□□ 1.21
LMX1B-203ENST00000526117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
LMX1B-203ENST00000526117 CALD1Q05682 793 aaKnown RBP22.62■■□□□ 1.21
LMX1B-203ENST00000526117 INTS5Q6P9B9 1019 aaKnown RBP22.62■■□□□ 1.21
LMX1B-203ENST00000526117 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
LMX1B-203ENST00000526117 CCDC87Q9NVE4 849 aa22.62■■□□□ 1.21
LMX1B-203ENST00000526117 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
LMX1B-203ENST00000526117 SNRPA1P09661 255 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms