RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
CLP1-202ENST00000525602 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
CLP1-202ENST00000525602 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
CLP1-202ENST00000525602 HMOX1P09601 288 aa17.18■□□□□ 0.34
CLP1-202ENST00000525602 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
CLP1-202ENST00000525602 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
CLP1-202ENST00000525602 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
CLP1-202ENST00000525602 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
CLP1-202ENST00000525602 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
CLP1-202ENST00000525602 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
CLP1-202ENST00000525602 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
CLP1-202ENST00000525602 PIGBQ92521 554 aa17.16■□□□□ 0.34
CLP1-202ENST00000525602 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
CLP1-202ENST00000525602 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
CLP1-202ENST00000525602 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
CLP1-202ENST00000525602 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
CLP1-202ENST00000525602 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
CLP1-202ENST00000525602 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
CLP1-202ENST00000525602 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
CLP1-202ENST00000525602 SMARCC1Q92922 1105 aaPredicted RBP17.13■□□□□ 0.33
CLP1-202ENST00000525602 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
CLP1-202ENST00000525602 PHF14O94880 888 aa17.12■□□□□ 0.33
CLP1-202ENST00000525602 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
CLP1-202ENST00000525602 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
CLP1-202ENST00000525602 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
CLP1-202ENST00000525602 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
CLP1-202ENST00000525602 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
CLP1-202ENST00000525602 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
CLP1-202ENST00000525602 RALBP1Q15311 655 aa17.09■□□□□ 0.33
CLP1-202ENST00000525602 AK7Q96M32 723 aa17.09■□□□□ 0.33
CLP1-202ENST00000525602 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
CLP1-202ENST00000525602 MRC1P22897 1456 aa17.09■□□□□ 0.33
CLP1-202ENST00000525602 GRIN3BO60391 1043 aa17.08■□□□□ 0.32
CLP1-202ENST00000525602 CABP4P57796 275 aa17.08■□□□□ 0.32
CLP1-202ENST00000525602 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
CLP1-202ENST00000525602 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
CLP1-202ENST00000525602 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
CLP1-202ENST00000525602 U2AF1L5P0DN76 240 aaPredicted RBP17.07■□□□□ 0.32
CLP1-202ENST00000525602 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
CLP1-202ENST00000525602 SIK1P57059 783 aa17.07■□□□□ 0.32
CLP1-202ENST00000525602 U2AF1Q01081 240 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLP1-202ENST00000525602 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
CLP1-202ENST00000525602 ADCY9O60503 1353 aa17.07■□□□□ 0.32
CLP1-202ENST00000525602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
CLP1-202ENST00000525602 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
CLP1-202ENST00000525602 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
CLP1-202ENST00000525602 ZNF831Q5JPB2 1677 aa17.05■□□□□ 0.32
CLP1-202ENST00000525602 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
CLP1-202ENST00000525602 ITPK1Q13572 414 aa17.05■□□□□ 0.32
CLP1-202ENST00000525602 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
CLP1-202ENST00000525602 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
CLP1-202ENST00000525602 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
CLP1-202ENST00000525602 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
CLP1-202ENST00000525602 FCHSD2O94868 740 aa17.03■□□□□ 0.32
CLP1-202ENST00000525602 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
CLP1-202ENST00000525602 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
CLP1-202ENST00000525602 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
CLP1-202ENST00000525602 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
CLP1-202ENST00000525602 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
CLP1-202ENST00000525602 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.31
CLP1-202ENST00000525602 GNPATO15228 680 aa17.02■□□□□ 0.31
CLP1-202ENST00000525602 ATP6V1AP38606 617 aa17.02■□□□□ 0.31
CLP1-202ENST00000525602 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.31
CLP1-202ENST00000525602 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
CLP1-202ENST00000525602 CICQ96RK0 1608 aaPredicted RBP17.01■□□□□ 0.31
CLP1-202ENST00000525602 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
CLP1-202ENST00000525602 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
CLP1-202ENST00000525602 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
CLP1-202ENST00000525602 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
CLP1-202ENST00000525602 C4AP0C0L4 1744 aa17■□□□□ 0.31
CLP1-202ENST00000525602 TJP1Q07157 1748 aa17■□□□□ 0.31
CLP1-202ENST00000525602 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
CLP1-202ENST00000525602 SSFA2P28290 1259 aa17■□□□□ 0.31
CLP1-202ENST00000525602 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
CLP1-202ENST00000525602 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
CLP1-202ENST00000525602 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
CLP1-202ENST00000525602 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
CLP1-202ENST00000525602 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
CLP1-202ENST00000525602 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
CLP1-202ENST00000525602 UBR2Q8IWV8 1755 aa16.98■□□□□ 0.31
CLP1-202ENST00000525602 MYH14Q7Z406 1995 aaKnown RBP16.98■□□□□ 0.31
CLP1-202ENST00000525602 MMP10P09238 476 aa16.96■□□□□ 0.31
CLP1-202ENST00000525602 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
CLP1-202ENST00000525602 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
CLP1-202ENST00000525602 BRCA1P38398 1863 aaKnown RBP16.96■□□□□ 0.3
CLP1-202ENST00000525602 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
CLP1-202ENST00000525602 TEFQ10587 303 aa16.95■□□□□ 0.3
CLP1-202ENST00000525602 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
CLP1-202ENST00000525602 NEFMP07197 916 aa16.94■□□□□ 0.3
CLP1-202ENST00000525602 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
CLP1-202ENST00000525602 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
CLP1-202ENST00000525602 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
CLP1-202ENST00000525602 MCM10Q7L590 875 aa16.92■□□□□ 0.3
CLP1-202ENST00000525602 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
CLP1-202ENST00000525602 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
CLP1-202ENST00000525602 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
CLP1-202ENST00000525602 HSPA6P17066 643 aa16.91■□□□□ 0.3
CLP1-202ENST00000525602 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
CLP1-202ENST00000525602 A0A0G2JLW4 131 aa16.9■□□□□ 0.3
CLP1-202ENST00000525602 KIF3CO14782 793 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms