RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
CCS-202ENST00000525435 TNS1Q9HBL0 1735 aaKnown RBP16.28■□□□□ 0.2
CCS-202ENST00000525435 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
CCS-202ENST00000525435 NBPF14Q5TI25 921 aa16.27■□□□□ 0.2
CCS-202ENST00000525435 MCM10Q7L590 875 aa16.27■□□□□ 0.2
CCS-202ENST00000525435 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
CCS-202ENST00000525435 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
CCS-202ENST00000525435 SIK1P57059 783 aa16.26■□□□□ 0.19
CCS-202ENST00000525435 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
CCS-202ENST00000525435 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
CCS-202ENST00000525435 MRC1P22897 1456 aa16.26■□□□□ 0.19
CCS-202ENST00000525435 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
CCS-202ENST00000525435 ADAMTS7Q9UKP4 1686 aa16.25■□□□□ 0.19
CCS-202ENST00000525435 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
CCS-202ENST00000525435 DCTN1Q14203 1278 aa16.25■□□□□ 0.19
CCS-202ENST00000525435 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
CCS-202ENST00000525435 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
CCS-202ENST00000525435 BTAF1O14981 1849 aa16.24■□□□□ 0.19
CCS-202ENST00000525435 RGPD3A6NKT7 1758 aaPredicted RBP16.23■□□□□ 0.19
CCS-202ENST00000525435 RGPD4Q7Z3J3 1758 aa16.23■□□□□ 0.19
CCS-202ENST00000525435 TOGARAM1Q9Y4F4 1720 aa16.23■□□□□ 0.19
CCS-202ENST00000525435 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
CCS-202ENST00000525435 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
CCS-202ENST00000525435 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
CCS-202ENST00000525435 ITGB4P16144 1822 aa16.22■□□□□ 0.19
CCS-202ENST00000525435 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
CCS-202ENST00000525435 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
CCS-202ENST00000525435 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
CCS-202ENST00000525435 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
CCS-202ENST00000525435 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
CCS-202ENST00000525435 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
CCS-202ENST00000525435 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
CCS-202ENST00000525435 CHL1O00533 1208 aa16.19■□□□□ 0.18
CCS-202ENST00000525435 RC3H1Q5TC82 1133 aaKnown RBP16.19■□□□□ 0.18
CCS-202ENST00000525435 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
CCS-202ENST00000525435 SLC4A9Q96Q91 983 aa16.19■□□□□ 0.18
CCS-202ENST00000525435 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
CCS-202ENST00000525435 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
CCS-202ENST00000525435 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
CCS-202ENST00000525435 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
CCS-202ENST00000525435 KCNQ4P56696 695 aa16.17■□□□□ 0.18
CCS-202ENST00000525435 ITPK1Q13572 414 aa16.17■□□□□ 0.18
CCS-202ENST00000525435 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
CCS-202ENST00000525435 STARD3NLO95772 234 aa16.16■□□□□ 0.18
CCS-202ENST00000525435 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
CCS-202ENST00000525435 GNAI1P63096 354 aa16.16■□□□□ 0.18
CCS-202ENST00000525435 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
CCS-202ENST00000525435 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
CCS-202ENST00000525435 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
CCS-202ENST00000525435 IL16Q14005 1332 aa16.16■□□□□ 0.18
CCS-202ENST00000525435 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 KCNQ3O43525 872 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 LY75O60449 1722 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
CCS-202ENST00000525435 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 CNTNAP4Q9C0A0 1308 aa16.15■□□□□ 0.18
CCS-202ENST00000525435 RREB1Q92766 1687 aa16.14■□□□□ 0.18
CCS-202ENST00000525435 SRCAPQ6ZRS2 3230 aa16.14■□□□□ 0.17
CCS-202ENST00000525435 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
CCS-202ENST00000525435 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
CCS-202ENST00000525435 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
CCS-202ENST00000525435 AK7Q96M32 723 aa16.14■□□□□ 0.17
CCS-202ENST00000525435 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
CCS-202ENST00000525435 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
CCS-202ENST00000525435 ZNF831Q5JPB2 1677 aa16.13■□□□□ 0.17
CCS-202ENST00000525435 DLG5Q8TDM6 1919 aa16.12■□□□□ 0.17
CCS-202ENST00000525435 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
CCS-202ENST00000525435 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
CCS-202ENST00000525435 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
CCS-202ENST00000525435 SIPA1L3O60292 1781 aaPredicted RBP16.11■□□□□ 0.17
CCS-202ENST00000525435 ADRA2BP18089 450 aa16.11■□□□□ 0.17
CCS-202ENST00000525435 SSFA2P28290 1259 aa16.11■□□□□ 0.17
CCS-202ENST00000525435 CRKLP46109 303 aaKnown RBP16.11■□□□□ 0.17
CCS-202ENST00000525435 SLC16A10Q8TF71 515 aa16.11■□□□□ 0.17
CCS-202ENST00000525435 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
CCS-202ENST00000525435 RTCBQ9Y3I0 505 aaKnown RBP16.11■□□□□ 0.17
CCS-202ENST00000525435 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
CCS-202ENST00000525435 NUP188Q5SRE5 1749 aa16.11■□□□□ 0.17
CCS-202ENST00000525435 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
CCS-202ENST00000525435 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
CCS-202ENST00000525435 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
CCS-202ENST00000525435 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
CCS-202ENST00000525435 GNPATO15228 680 aa16.09■□□□□ 0.17
CCS-202ENST00000525435 HOXB7P09629 217 aa16.09■□□□□ 0.17
CCS-202ENST00000525435 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
CCS-202ENST00000525435 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
CCS-202ENST00000525435 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
CCS-202ENST00000525435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
CCS-202ENST00000525435 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
CCS-202ENST00000525435 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
CCS-202ENST00000525435 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms