RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 FOXO3O43524 673 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 GNAI2P04899 355 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 AMPHP49418 695 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 NUCB2P80303 420 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 G2E3Q7L622 706 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 C16orf71Q8IYS4 520 aaPredicted RBP10.98□□□□□ -0.65
PKP3-202ENST00000524646 NGDNQ8NEJ9 315 aaKnown RBP10.98□□□□□ -0.65
PKP3-202ENST00000524646 SLC26A8Q96RN1 970 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 EYA1Q99502 592 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 RRAGDQ9NQL2 400 aaPredicted RBP10.98□□□□□ -0.65
PKP3-202ENST00000524646 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 SALL3Q9BXA9 1300 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 LMTK3Q96Q04 1460 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 TRPM3Q9HCF6 1732 aaPredicted RBP10.98□□□□□ -0.65
PKP3-202ENST00000524646 ST18O60284 1047 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 BAG4O95429 457 aaKnown RBP10.97□□□□□ -0.65
PKP3-202ENST00000524646 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
PKP3-202ENST00000524646 GNAI3P08754 354 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 BABAM1Q9NWV8 329 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 AOX1Q06278 1338 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 SLIT3O75094 1523 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
PKP3-202ENST00000524646 OVOS2A0A0G2JMS6 1433 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 F6X3S4 739 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 APBB1O00213 710 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 HOXC9P31274 260 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 PDE1AP54750 535 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 FLIIQ13045 1269 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 SLC4A10Q6U841 1118 aa10.96□□□□□ -0.65
PKP3-202ENST00000524646 GNAT3A8MTJ3 354 aa10.95□□□□□ -0.66
PKP3-202ENST00000524646 KLHL40Q2TBA0 621 aa10.95□□□□□ -0.66
PKP3-202ENST00000524646 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
PKP3-202ENST00000524646 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
PKP3-202ENST00000524646 SETD1BQ9UPS6 1966 aaKnown RBP10.95□□□□□ -0.66
PKP3-202ENST00000524646 LRRCC1Q9C099 1032 aa10.94□□□□□ -0.66
PKP3-202ENST00000524646 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
PKP3-202ENST00000524646 C5P01031 1676 aa10.94□□□□□ -0.66
PKP3-202ENST00000524646 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 SCN11AQ9UI33 1791 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 CEMIPQ8WUJ3 1361 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 MX1P20591 662 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 MCCP23508 829 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 NLRP6P59044 892 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
PKP3-202ENST00000524646 ESYT1Q9BSJ8 1104 aa10.93□□□□□ -0.66
PKP3-202ENST00000524646 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
PKP3-202ENST00000524646 CLCN1P35523 988 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 CEBPAP49715 358 aaPredicted RBP10.92□□□□□ -0.66
PKP3-202ENST00000524646 MCM2P49736 904 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 ATP8B2P98198 1209 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 THEMISQ8N1K5 641 aaPredicted RBP10.92□□□□□ -0.66
PKP3-202ENST00000524646 IL17RAQ96F46 866 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 SRCIN1Q9C0H9 1055 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 STAP2Q9UGK3 403 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
PKP3-202ENST00000524646 LAMB4A4D0S4 1761 aa10.91□□□□□ -0.66
PKP3-202ENST00000524646 ZNF445P59923 1031 aa10.91□□□□□ -0.66
PKP3-202ENST00000524646 ANAPC15P60006 121 aa10.91□□□□□ -0.66
PKP3-202ENST00000524646 CCDC173Q0VFZ6 552 aa10.91□□□□□ -0.66
PKP3-202ENST00000524646 GAS2L3Q86XJ1 694 aa10.91□□□□□ -0.66
PKP3-202ENST00000524646 LRRFIP2Q9Y608 721 aaKnown RBP10.91□□□□□ -0.66
PKP3-202ENST00000524646 DDX49Q9Y6V7 483 aaKnown RBP10.91□□□□□ -0.66
PKP3-202ENST00000524646 PXDNQ92626 1479 aa10.91□□□□□ -0.66
PKP3-202ENST00000524646 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
PKP3-202ENST00000524646 TCHHQ07283 1943 aa10.9□□□□□ -0.66
PKP3-202ENST00000524646 ALS2Q96Q42 1657 aa10.9□□□□□ -0.66
PKP3-202ENST00000524646 PNMA6EA0A0J9YXQ4 647 aa10.9□□□□□ -0.66
PKP3-202ENST00000524646 EPB41L2O43491 1005 aaKnown RBP10.9□□□□□ -0.66
PKP3-202ENST00000524646 HOXB7P09629 217 aa10.9□□□□□ -0.66
PKP3-202ENST00000524646 UBTFL1P0CB47 393 aaPredicted RBP10.9□□□□□ -0.66
PKP3-202ENST00000524646 KCNA6P17658 529 aa10.9□□□□□ -0.66
PKP3-202ENST00000524646 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.66
PKP3-202ENST00000524646 IL17REQ8NFR9 667 aa10.9□□□□□ -0.66
PKP3-202ENST00000524646 ABCC6O95255 1503 aa10.89□□□□□ -0.67
PKP3-202ENST00000524646 CHMLP26374 656 aa10.89□□□□□ -0.67
PKP3-202ENST00000524646 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
PKP3-202ENST00000524646 MCTP1Q6DN14 999 aa10.89□□□□□ -0.67
PKP3-202ENST00000524646 ZGPATQ8N5A5 531 aaKnown RBP10.89□□□□□ -0.67
PKP3-202ENST00000524646 LMBRD1Q9NUN5 540 aa10.89□□□□□ -0.67
PKP3-202ENST00000524646 PARP4Q9UKK3 1724 aaKnown RBP10.89□□□□□ -0.67
PKP3-202ENST00000524646 ADAMTSL3P82987 1691 aa10.89□□□□□ -0.67
PKP3-202ENST00000524646 RAB11FIP3O75154 756 aa10.88□□□□□ -0.67
PKP3-202ENST00000524646 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
PKP3-202ENST00000524646 CUL4AQ13619 759 aa10.88□□□□□ -0.67
PKP3-202ENST00000524646 POLA2Q14181 598 aa10.88□□□□□ -0.67
PKP3-202ENST00000524646 TSHZ3Q63HK5 1081 aa10.88□□□□□ -0.67
PKP3-202ENST00000524646 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
PKP3-202ENST00000524646 PPP1R9BQ96SB3 815 aa10.88□□□□□ -0.67
PKP3-202ENST00000524646 ESPNB1AK53 854 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 PKP1Q13835 747 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 ABTB2Q8N961 1025 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
PKP3-202ENST00000524646 TMX3Q96JJ7 454 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 CHMP4AQ9BY43 222 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 ZDHHC9Q9Y397 364 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms