RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 FLT4P35916 1363 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 EXOC5O00471 708 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 APBA3O96018 575 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 IL2RBP14784 551 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 CC2D1BQ5T0F9 858 aaKnown RBP9.38□□□□□ -0.91
VPS11-201ENST00000524454 NBPF6Q5VWK0 638 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 NBPF4Q96M43 638 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 DOT1LQ8TEK3 1739 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 NHSQ6T4R5 1651 aa9.38□□□□□ -0.91
VPS11-201ENST00000524454 NEFLP07196 543 aa9.37□□□□□ -0.91
VPS11-201ENST00000524454 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
VPS11-201ENST00000524454 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
VPS11-201ENST00000524454 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
VPS11-201ENST00000524454 POLKQ9UBT6 870 aa9.37□□□□□ -0.91
VPS11-201ENST00000524454 BTAF1O14981 1849 aa9.37□□□□□ -0.91
VPS11-201ENST00000524454 KAT6BQ8WYB5 2073 aa9.36□□□□□ -0.91
VPS11-201ENST00000524454 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
VPS11-201ENST00000524454 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
VPS11-201ENST00000524454 KCNQ2O43526 872 aa9.36□□□□□ -0.91
VPS11-201ENST00000524454 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
VPS11-201ENST00000524454 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
VPS11-201ENST00000524454 WDR43Q15061 677 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS11-201ENST00000524454 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
VPS11-201ENST00000524454 CAMKK2Q96RR4 588 aa9.35□□□□□ -0.91
VPS11-201ENST00000524454 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
VPS11-201ENST00000524454 PKD1L3Q7Z443 1732 aa9.34□□□□□ -0.91
VPS11-201ENST00000524454 BMP2KQ9NSY1 1161 aaPredicted RBP9.34□□□□□ -0.91
VPS11-201ENST00000524454 RGPD3A6NKT7 1758 aaPredicted RBP9.34□□□□□ -0.91
VPS11-201ENST00000524454 RGPD4Q7Z3J3 1758 aa9.34□□□□□ -0.91
VPS11-201ENST00000524454 TOGARAM1Q9Y4F4 1720 aa9.34□□□□□ -0.92
VPS11-201ENST00000524454 RNF123Q5XPI4 1314 aa9.33□□□□□ -0.92
VPS11-201ENST00000524454 EIF4A2Q14240 407 aaKnown RBP9.33□□□□□ -0.92
VPS11-201ENST00000524454 PELP1Q8IZL8 1130 aaKnown RBP9.33□□□□□ -0.92
VPS11-201ENST00000524454 CFAP53Q96M91 514 aa9.33□□□□□ -0.92
VPS11-201ENST00000524454 KIF24Q5T7B8 1368 aa9.33□□□□□ -0.92
VPS11-201ENST00000524454 TATP17735 454 aaPredicted RBP9.32□□□□□ -0.92
VPS11-201ENST00000524454 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
VPS11-201ENST00000524454 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
VPS11-201ENST00000524454 RAPGEF4Q8WZA2 1011 aa9.32□□□□□ -0.92
VPS11-201ENST00000524454 EYA1Q99502 592 aa9.32□□□□□ -0.92
VPS11-201ENST00000524454 BCL11BQ9C0K0 894 aaPredicted RBP9.32□□□□□ -0.92
VPS11-201ENST00000524454 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
VPS11-201ENST00000524454 ITGB4P16144 1822 aa9.32□□□□□ -0.92
VPS11-201ENST00000524454 BCL9O00512 1426 aa9.31□□□□□ -0.92
VPS11-201ENST00000524454 TIE1P35590 1138 aa9.31□□□□□ -0.92
VPS11-201ENST00000524454 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
VPS11-201ENST00000524454 COL3A1P02461 1466 aaPredicted RBP9.31□□□□□ -0.92
VPS11-201ENST00000524454 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
VPS11-201ENST00000524454 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
VPS11-201ENST00000524454 TTLL13PA6NNM8 815 aa9.3□□□□□ -0.92
VPS11-201ENST00000524454 PSEN1P49768 467 aa9.3□□□□□ -0.92
VPS11-201ENST00000524454 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
VPS11-201ENST00000524454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
VPS11-201ENST00000524454 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
VPS11-201ENST00000524454 PRIM1P49642 420 aaKnown RBP9.29□□□□□ -0.92
VPS11-201ENST00000524454 ASTLQ6HA08 431 aaPredicted RBP9.29□□□□□ -0.92
VPS11-201ENST00000524454 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
VPS11-201ENST00000524454 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
VPS11-201ENST00000524454 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
VPS11-201ENST00000524454 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
VPS11-201ENST00000524454 ADAMTS8Q9UP79 889 aa9.29□□□□□ -0.92
VPS11-201ENST00000524454 LY75O60449 1722 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 CYP27B1O15528 508 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 MTHFSP49914 203 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 KCNQ4P56696 695 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 CCDC27Q2M243 656 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
VPS11-201ENST00000524454 TUBGCP6Q96RT7 1819 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 PCDH11XQ9BZA7 1347 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 PCDH11YQ9BZA8 1340 aa9.28□□□□□ -0.92
VPS11-201ENST00000524454 PAPPAQ13219 1627 aa9.27□□□□□ -0.92
VPS11-201ENST00000524454 VIRMAQ69YN4 1812 aaKnown RBP9.27□□□□□ -0.93
VPS11-201ENST00000524454 PLSCR1O15162 318 aa9.27□□□□□ -0.93
VPS11-201ENST00000524454 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.93
VPS11-201ENST00000524454 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
VPS11-201ENST00000524454 IGSF1Q8N6C5 1336 aa9.27□□□□□ -0.93
VPS11-201ENST00000524454 LRP5O75197 1615 aa9.27□□□□□ -0.93
VPS11-201ENST00000524454 CASZ1Q86V15 1759 aa9.27□□□□□ -0.93
VPS11-201ENST00000524454 IL13P35225 146 aa9.26□□□□□ -0.93
VPS11-201ENST00000524454 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
VPS11-201ENST00000524454 PDGFDQ9GZP0 370 aaPredicted RBP9.26□□□□□ -0.93
VPS11-201ENST00000524454 HMOX1P09601 288 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 SULT6B1Q6IMI4 303 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 RUNDC1Q96C34 613 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 LRRC4BQ9NT99 713 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 SPG7Q9UQ90 795 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 C5P01031 1676 aa9.25□□□□□ -0.93
VPS11-201ENST00000524454 TAF1LQ8IZX4 1826 aa9.24□□□□□ -0.93
VPS11-201ENST00000524454 PHKG2P15735 406 aa9.24□□□□□ -0.93
VPS11-201ENST00000524454 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
VPS11-201ENST00000524454 MPRIPQ6WCQ1 1025 aa9.24□□□□□ -0.93
VPS11-201ENST00000524454 TRMT2AQ8IZ69 625 aaKnown RBP9.24□□□□□ -0.93
VPS11-201ENST00000524454 E9PSI1 815 aa9.23□□□□□ -0.93
VPS11-201ENST00000524454 ZNF827Q17R98 1081 aa9.23□□□□□ -0.93
VPS11-201ENST00000524454 SCN11AQ9UI33 1791 aa9.22□□□□□ -0.93
VPS11-201ENST00000524454 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
VPS11-201ENST00000524454 DIAPH1O60610 1272 aaKnown RBP9.22□□□□□ -0.93
VPS11-201ENST00000524454 ZNF530Q6P9A1 599 aaPredicted RBP9.22□□□□□ -0.93
VPS11-201ENST00000524454 WDR63Q8IWG1 891 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms