RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 HTATSF1O43719 755 aaKnown RBP16.65■□□□□ 0.26
VEGFA-225ENST00000523950 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
VEGFA-225ENST00000523950 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-225ENST00000523950 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
VEGFA-225ENST00000523950 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-225ENST00000523950 DLG5Q8TDM6 1919 aa16.64■□□□□ 0.26
VEGFA-225ENST00000523950 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
VEGFA-225ENST00000523950 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
VEGFA-225ENST00000523950 LGR6Q9HBX8 967 aa16.64■□□□□ 0.25
VEGFA-225ENST00000523950 ASAP1Q9ULH1 1129 aa16.64■□□□□ 0.25
VEGFA-225ENST00000523950 CEMIPQ8WUJ3 1361 aa16.64■□□□□ 0.25
VEGFA-225ENST00000523950 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
VEGFA-225ENST00000523950 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-225ENST00000523950 SIK1P57059 783 aa16.63■□□□□ 0.25
VEGFA-225ENST00000523950 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
VEGFA-225ENST00000523950 CASZ1Q86V15 1759 aa16.63■□□□□ 0.25
VEGFA-225ENST00000523950 TEFQ10587 303 aa16.62■□□□□ 0.25
VEGFA-225ENST00000523950 IL17REQ8NFR9 667 aa16.62■□□□□ 0.25
VEGFA-225ENST00000523950 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
VEGFA-225ENST00000523950 C4BP0C0L5 1744 aa16.62■□□□□ 0.25
VEGFA-225ENST00000523950 LRP5O75197 1615 aa16.61■□□□□ 0.25
VEGFA-225ENST00000523950 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
VEGFA-225ENST00000523950 UBR2Q8IWV8 1755 aa16.61■□□□□ 0.25
VEGFA-225ENST00000523950 TUBGCP6Q96RT7 1819 aa16.61■□□□□ 0.25
VEGFA-225ENST00000523950 COL5A3P25940 1745 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-225ENST00000523950 ATP6V1AP38606 617 aa16.59■□□□□ 0.25
VEGFA-225ENST00000523950 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
VEGFA-225ENST00000523950 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
VEGFA-225ENST00000523950 KCNQ4P56696 695 aa16.58■□□□□ 0.24
VEGFA-225ENST00000523950 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
VEGFA-225ENST00000523950 KCPQ6ZWJ8 1503 aa16.58■□□□□ 0.24
VEGFA-225ENST00000523950 TJP1Q07157 1748 aa16.57■□□□□ 0.24
VEGFA-225ENST00000523950 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
VEGFA-225ENST00000523950 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
VEGFA-225ENST00000523950 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
VEGFA-225ENST00000523950 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
VEGFA-225ENST00000523950 ITPK1Q13572 414 aa16.56■□□□□ 0.24
VEGFA-225ENST00000523950 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
VEGFA-225ENST00000523950 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
VEGFA-225ENST00000523950 MRS2Q9HD23 443 aa16.56■□□□□ 0.24
VEGFA-225ENST00000523950 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
VEGFA-225ENST00000523950 CNTNAP4Q9C0A0 1308 aa16.55■□□□□ 0.24
VEGFA-225ENST00000523950 MCM10Q7L590 875 aa16.55■□□□□ 0.24
VEGFA-225ENST00000523950 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
VEGFA-225ENST00000523950 SLC16A10Q8TF71 515 aa16.55■□□□□ 0.24
VEGFA-225ENST00000523950 AK7Q96M32 723 aa16.55■□□□□ 0.24
VEGFA-225ENST00000523950 SLC4A9Q96Q91 983 aa16.55■□□□□ 0.24
VEGFA-225ENST00000523950 PNPLA7Q6ZV29 1317 aa16.54■□□□□ 0.24
VEGFA-225ENST00000523950 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
VEGFA-225ENST00000523950 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
VEGFA-225ENST00000523950 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
VEGFA-225ENST00000523950 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
VEGFA-225ENST00000523950 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
VEGFA-225ENST00000523950 PNISRQ8TF01 805 aaKnown RBP16.54■□□□□ 0.24
VEGFA-225ENST00000523950 RIPK4P57078 832 aa16.53■□□□□ 0.24
VEGFA-225ENST00000523950 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
VEGFA-225ENST00000523950 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
VEGFA-225ENST00000523950 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
VEGFA-225ENST00000523950 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
VEGFA-225ENST00000523950 SSFA2P28290 1259 aa16.52■□□□□ 0.24
VEGFA-225ENST00000523950 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
VEGFA-225ENST00000523950 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.24
VEGFA-225ENST00000523950 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
VEGFA-225ENST00000523950 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
VEGFA-225ENST00000523950 COL24A1Q17RW2 1714 aa16.52■□□□□ 0.24
VEGFA-225ENST00000523950 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
VEGFA-225ENST00000523950 TEX13AQ9BXU3 409 aaPredicted RBP16.51■□□□□ 0.23
VEGFA-225ENST00000523950 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
VEGFA-225ENST00000523950 MYH14Q7Z406 1995 aaKnown RBP16.5■□□□□ 0.23
VEGFA-225ENST00000523950 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
VEGFA-225ENST00000523950 GNPATO15228 680 aa16.49■□□□□ 0.23
VEGFA-225ENST00000523950 ADRA2BP18089 450 aa16.49■□□□□ 0.23
VEGFA-225ENST00000523950 ZNF496Q96IT1 587 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-225ENST00000523950 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-225ENST00000523950 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
VEGFA-225ENST00000523950 COL23A1Q86Y22 540 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-225ENST00000523950 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
VEGFA-225ENST00000523950 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
VEGFA-225ENST00000523950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
VEGFA-225ENST00000523950 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
VEGFA-225ENST00000523950 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
VEGFA-225ENST00000523950 STARD3NLO95772 234 aa16.47■□□□□ 0.23
VEGFA-225ENST00000523950 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
VEGFA-225ENST00000523950 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
VEGFA-225ENST00000523950 RRP7AQ9Y3A4 280 aaKnown RBP16.47■□□□□ 0.23
VEGFA-225ENST00000523950 APAF1O14727 1248 aa16.46■□□□□ 0.23
VEGFA-225ENST00000523950 CYP19A1P11511 503 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-225ENST00000523950 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
VEGFA-225ENST00000523950 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
VEGFA-225ENST00000523950 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.23
VEGFA-225ENST00000523950 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
VEGFA-225ENST00000523950 C4AP0C0L4 1744 aa16.45■□□□□ 0.22
VEGFA-225ENST00000523950 MSH5O43196 834 aa16.45■□□□□ 0.22
VEGFA-225ENST00000523950 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
VEGFA-225ENST00000523950 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
VEGFA-225ENST00000523950 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
VEGFA-225ENST00000523950 KCNQ3O43525 872 aa16.44■□□□□ 0.22
VEGFA-225ENST00000523950 PHF14O94880 888 aa16.44■□□□□ 0.22
VEGFA-225ENST00000523950 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
VEGFA-225ENST00000523950 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms