RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PALLDQ8WX93 1383 aa17.01■□□□□ 0.31
VEGFA-224ENST00000523873 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
VEGFA-224ENST00000523873 UBR2Q8IWV8 1755 aa17■□□□□ 0.31
VEGFA-224ENST00000523873 NFE2L2Q16236 605 aa16.99■□□□□ 0.31
VEGFA-224ENST00000523873 MCM10Q7L590 875 aa16.99■□□□□ 0.31
VEGFA-224ENST00000523873 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
VEGFA-224ENST00000523873 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
VEGFA-224ENST00000523873 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
VEGFA-224ENST00000523873 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
VEGFA-224ENST00000523873 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
VEGFA-224ENST00000523873 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
VEGFA-224ENST00000523873 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
VEGFA-224ENST00000523873 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-224ENST00000523873 TJP1Q07157 1748 aa16.97■□□□□ 0.31
VEGFA-224ENST00000523873 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
VEGFA-224ENST00000523873 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-224ENST00000523873 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-224ENST00000523873 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
VEGFA-224ENST00000523873 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
VEGFA-224ENST00000523873 NEUROD2Q15784 382 aa16.96■□□□□ 0.31
VEGFA-224ENST00000523873 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
VEGFA-224ENST00000523873 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-224ENST00000523873 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
VEGFA-224ENST00000523873 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-224ENST00000523873 CEMIPQ8WUJ3 1361 aa16.96■□□□□ 0.31
VEGFA-224ENST00000523873 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
VEGFA-224ENST00000523873 C4BP0C0L5 1744 aa16.95■□□□□ 0.3
VEGFA-224ENST00000523873 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
VEGFA-224ENST00000523873 RIPK4P57078 832 aa16.94■□□□□ 0.3
VEGFA-224ENST00000523873 TEFQ10587 303 aa16.94■□□□□ 0.3
VEGFA-224ENST00000523873 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
VEGFA-224ENST00000523873 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
VEGFA-224ENST00000523873 KCPQ6ZWJ8 1503 aa16.94■□□□□ 0.3
VEGFA-224ENST00000523873 QSER1Q2KHR3 1735 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 SIK1P57059 783 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
VEGFA-224ENST00000523873 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 MIER1Q8N108 512 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
VEGFA-224ENST00000523873 APAF1O14727 1248 aa16.92■□□□□ 0.3
VEGFA-224ENST00000523873 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
VEGFA-224ENST00000523873 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
VEGFA-224ENST00000523873 ITPK1Q13572 414 aa16.92■□□□□ 0.3
VEGFA-224ENST00000523873 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
VEGFA-224ENST00000523873 NBPF14Q5TI25 921 aa16.92■□□□□ 0.3
VEGFA-224ENST00000523873 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
VEGFA-224ENST00000523873 KCNQ3O43525 872 aa16.91■□□□□ 0.3
VEGFA-224ENST00000523873 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
VEGFA-224ENST00000523873 CICQ96RK0 1608 aaPredicted RBP16.91■□□□□ 0.3
VEGFA-224ENST00000523873 STK32BQ9NY57 414 aa16.9■□□□□ 0.3
VEGFA-224ENST00000523873 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
VEGFA-224ENST00000523873 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
VEGFA-224ENST00000523873 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
VEGFA-224ENST00000523873 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
VEGFA-224ENST00000523873 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
VEGFA-224ENST00000523873 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
VEGFA-224ENST00000523873 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
VEGFA-224ENST00000523873 SMIM5Q71RC9 77 aa16.87■□□□□ 0.29
VEGFA-224ENST00000523873 TTC5Q8N0Z6 440 aa16.87■□□□□ 0.29
VEGFA-224ENST00000523873 PDGFDQ9GZP0 370 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-224ENST00000523873 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
VEGFA-224ENST00000523873 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-224ENST00000523873 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
VEGFA-224ENST00000523873 LAMB4A4D0S4 1761 aa16.86■□□□□ 0.29
VEGFA-224ENST00000523873 DNAJC10Q8IXB1 793 aa16.85■□□□□ 0.29
VEGFA-224ENST00000523873 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-224ENST00000523873 SALL2Q9Y467 1007 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-224ENST00000523873 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
VEGFA-224ENST00000523873 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
VEGFA-224ENST00000523873 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.28
VEGFA-224ENST00000523873 TFCP2L1Q9NZI6 479 aa16.83■□□□□ 0.28
VEGFA-224ENST00000523873 HEG1Q9ULI3 1381 aa16.83■□□□□ 0.28
VEGFA-224ENST00000523873 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
VEGFA-224ENST00000523873 AK7Q96M32 723 aa16.82■□□□□ 0.28
VEGFA-224ENST00000523873 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
VEGFA-224ENST00000523873 GNPATO15228 680 aa16.81■□□□□ 0.28
VEGFA-224ENST00000523873 PHF14O94880 888 aa16.81■□□□□ 0.28
VEGFA-224ENST00000523873 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
VEGFA-224ENST00000523873 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
VEGFA-224ENST00000523873 CRKLP46109 303 aaKnown RBP16.8■□□□□ 0.28
VEGFA-224ENST00000523873 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
VEGFA-224ENST00000523873 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-224ENST00000523873 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-224ENST00000523873 MSH5O43196 834 aa16.78■□□□□ 0.28
VEGFA-224ENST00000523873 ZBTB7AO95365 584 aa16.78■□□□□ 0.28
VEGFA-224ENST00000523873 EIF4A1P60842 406 aaKnown RBP16.78■□□□□ 0.28
VEGFA-224ENST00000523873 INTS5Q6P9B9 1019 aaKnown RBP16.78■□□□□ 0.28
VEGFA-224ENST00000523873 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
VEGFA-224ENST00000523873 COL24A1Q17RW2 1714 aa16.78■□□□□ 0.28
VEGFA-224ENST00000523873 WWC1Q8IX03 1113 aa16.77■□□□□ 0.28
VEGFA-224ENST00000523873 ZBTB1Q9Y2K1 713 aa16.77■□□□□ 0.28
VEGFA-224ENST00000523873 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
VEGFA-224ENST00000523873 LRP5O75197 1615 aa16.77■□□□□ 0.27
VEGFA-224ENST00000523873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.76■□□□□ 0.27
VEGFA-224ENST00000523873 CHL1O00533 1208 aa16.76■□□□□ 0.27
VEGFA-224ENST00000523873 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-224ENST00000523873 KRT24Q2M2I5 525 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms