RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
TRAPPC9-214ENST00000523777 STK32BQ9NY57 414 aa21.35■■□□□ 1.01
TRAPPC9-214ENST00000523777 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
TRAPPC9-214ENST00000523777 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
TRAPPC9-214ENST00000523777 IL17REQ8NFR9 667 aa21.34■■□□□ 1.01
TRAPPC9-214ENST00000523777 CEMIPQ8WUJ3 1361 aa21.34■■□□□ 1.01
TRAPPC9-214ENST00000523777 LOC102724428A0A0B4J2F2 783 aa21.33■■□□□ 1.01
TRAPPC9-214ENST00000523777 SIK1P57059 783 aa21.33■■□□□ 1.01
TRAPPC9-214ENST00000523777 LMOD3Q0VAK6 560 aa21.33■■□□□ 1.01
TRAPPC9-214ENST00000523777 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
TRAPPC9-214ENST00000523777 LRRC4BQ9NT99 713 aa21.32■■□□□ 1
TRAPPC9-214ENST00000523777 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
TRAPPC9-214ENST00000523777 SLC15A2Q16348 729 aa21.31■■□□□ 1
TRAPPC9-214ENST00000523777 PAPPAQ13219 1627 aa21.3■■□□□ 1
TRAPPC9-214ENST00000523777 R3HDM1Q15032 1099 aaKnown RBP21.3■■□□□ 1
TRAPPC9-214ENST00000523777 ATP6V1AP38606 617 aa21.29■■□□□ 1
TRAPPC9-214ENST00000523777 TMPOP42166 694 aaKnown RBP21.29■■□□□ 1
TRAPPC9-214ENST00000523777 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
TRAPPC9-214ENST00000523777 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
TRAPPC9-214ENST00000523777 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
TRAPPC9-214ENST00000523777 C5P01031 1676 aa21.28■■□□□ 1
TRAPPC9-214ENST00000523777 TAF1LQ8IZX4 1826 aa21.28■■□□□ 1
TRAPPC9-214ENST00000523777 RIPK4P57078 832 aa21.28■■□□□ 1
TRAPPC9-214ENST00000523777 TTC5Q8N0Z6 440 aa21.28■■□□□ 1
TRAPPC9-214ENST00000523777 CCDC184Q52MB2 194 aa21.27■■□□□ 1
TRAPPC9-214ENST00000523777 MCM10Q7L590 875 aa21.27■■□□□ 1
TRAPPC9-214ENST00000523777 CCDC146Q8IYE0 955 aa21.27■■□□□ 1
TRAPPC9-214ENST00000523777 ANO8Q9HCE9 1232 aaPredicted RBP21.27■■□□□ 1
TRAPPC9-214ENST00000523777 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC9-214ENST00000523777 BTBD11A6QL63 1104 aa21.26■□□□□ 0.99
TRAPPC9-214ENST00000523777 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
TRAPPC9-214ENST00000523777 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC9-214ENST00000523777 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
TRAPPC9-214ENST00000523777 TFCP2L1Q9NZI6 479 aa21.25■□□□□ 0.99
TRAPPC9-214ENST00000523777 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
TRAPPC9-214ENST00000523777 PTCD1O75127 700 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-214ENST00000523777 KCNQ4P56696 695 aa21.24■□□□□ 0.99
TRAPPC9-214ENST00000523777 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-214ENST00000523777 ZNF790Q6PG37 636 aa21.24■□□□□ 0.99
TRAPPC9-214ENST00000523777 FLAD1Q8NFF5 587 aa21.24■□□□□ 0.99
TRAPPC9-214ENST00000523777 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
TRAPPC9-214ENST00000523777 AK7Q96M32 723 aa21.23■□□□□ 0.99
TRAPPC9-214ENST00000523777 CICQ96RK0 1608 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC9-214ENST00000523777 C4BP0C0L5 1744 aa21.22■□□□□ 0.99
TRAPPC9-214ENST00000523777 CCER2I3L3R5 266 aa21.22■□□□□ 0.99
TRAPPC9-214ENST00000523777 SLC39A6Q13433 755 aa21.22■□□□□ 0.99
TRAPPC9-214ENST00000523777 TEX13AQ9BXU3 409 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC9-214ENST00000523777 UBR2Q8IWV8 1755 aa21.22■□□□□ 0.99
TRAPPC9-214ENST00000523777 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
TRAPPC9-214ENST00000523777 RC3H1Q5TC82 1133 aaKnown RBP21.21■□□□□ 0.99
TRAPPC9-214ENST00000523777 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
TRAPPC9-214ENST00000523777 BABAM1Q9NWV8 329 aa21.21■□□□□ 0.99
TRAPPC9-214ENST00000523777 ITPK1Q13572 414 aa21.2■□□□□ 0.98
TRAPPC9-214ENST00000523777 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
TRAPPC9-214ENST00000523777 NCBP3Q53F19 620 aaKnown RBP21.2■□□□□ 0.98
TRAPPC9-214ENST00000523777 APAF1O14727 1248 aa21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 CALD1Q05682 793 aaKnown RBP21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 LINC00116Q8NCU8 138 aa21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 SLC16A10Q8TF71 515 aa21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 SLC4A9Q96Q91 983 aa21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 CNTNAP4Q9C0A0 1308 aa21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 KCPQ6ZWJ8 1503 aa21.19■□□□□ 0.98
TRAPPC9-214ENST00000523777 COL5A3P25940 1745 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC9-214ENST00000523777 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
TRAPPC9-214ENST00000523777 STARD3NLO95772 234 aa21.17■□□□□ 0.98
TRAPPC9-214ENST00000523777 SSFA2P28290 1259 aa21.17■□□□□ 0.98
TRAPPC9-214ENST00000523777 HEG1Q9ULI3 1381 aa21.17■□□□□ 0.98
TRAPPC9-214ENST00000523777 CASZ1Q86V15 1759 aa21.16■□□□□ 0.98
TRAPPC9-214ENST00000523777 NGEFQ8N5V2 710 aa21.16■□□□□ 0.98
TRAPPC9-214ENST00000523777 ZNF496Q96IT1 587 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC9-214ENST00000523777 RTCBQ9Y3I0 505 aaKnown RBP21.16■□□□□ 0.98
TRAPPC9-214ENST00000523777 PNPLA7Q6ZV29 1317 aa21.15■□□□□ 0.98
TRAPPC9-214ENST00000523777 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
TRAPPC9-214ENST00000523777 TRIM35Q9UPQ4 493 aa21.15■□□□□ 0.98
TRAPPC9-214ENST00000523777 UBR3Q6ZT12 1888 aa21.15■□□□□ 0.98
TRAPPC9-214ENST00000523777 TUBGCP6Q96RT7 1819 aa21.15■□□□□ 0.98
TRAPPC9-214ENST00000523777 TJP1Q07157 1748 aa21.15■□□□□ 0.98
TRAPPC9-214ENST00000523777 GNPATO15228 680 aa21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 ADRA2BP18089 450 aa21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 CCDC27Q2M243 656 aa21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 DNAJC10Q8IXB1 793 aa21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 THUMPD2Q9BTF0 503 aaKnown RBP21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 SPON1Q9HCB6 807 aa21.14■□□□□ 0.97
TRAPPC9-214ENST00000523777 RPS6KA4O75676 772 aa21.13■□□□□ 0.97
TRAPPC9-214ENST00000523777 SNRPA1P09661 255 aaKnown RBP21.13■□□□□ 0.97
TRAPPC9-214ENST00000523777 CRKLP46109 303 aaKnown RBP21.13■□□□□ 0.97
TRAPPC9-214ENST00000523777 TSPYL4Q9UJ04 414 aa21.13■□□□□ 0.97
TRAPPC9-214ENST00000523777 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
TRAPPC9-214ENST00000523777 CYP19A1P11511 503 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC9-214ENST00000523777 CCDC87Q9NVE4 849 aa21.12■□□□□ 0.97
TRAPPC9-214ENST00000523777 LRP5O75197 1615 aa21.11■□□□□ 0.97
TRAPPC9-214ENST00000523777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-214ENST00000523777 MSH5O43196 834 aa21.11■□□□□ 0.97
TRAPPC9-214ENST00000523777 TRAPPC3LQ5T215 181 aa21.11■□□□□ 0.97
TRAPPC9-214ENST00000523777 MYH14Q7Z406 1995 aaKnown RBP21.1■□□□□ 0.97
TRAPPC9-214ENST00000523777 KCNQ3O43525 872 aa21.1■□□□□ 0.97
TRAPPC9-214ENST00000523777 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-214ENST00000523777 MIS18AQ9NYP9 233 aa21.1■□□□□ 0.97
TRAPPC9-214ENST00000523777 CHL1O00533 1208 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms