RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
LAMA4-220ENST00000523765 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
LAMA4-220ENST00000523765 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
LAMA4-220ENST00000523765 CYP27B1O15528 508 aa13.83□□□□□ -0.2
LAMA4-220ENST00000523765 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
LAMA4-220ENST00000523765 MMP10P09238 476 aa13.82□□□□□ -0.2
LAMA4-220ENST00000523765 DPEP1P16444 411 aa13.82□□□□□ -0.2
LAMA4-220ENST00000523765 ITPK1Q13572 414 aa13.82□□□□□ -0.2
LAMA4-220ENST00000523765 C9orf131Q5VYM1 1079 aa13.82□□□□□ -0.2
LAMA4-220ENST00000523765 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-220ENST00000523765 TNRC6CQ9HCJ0 1690 aaKnown RBP13.82□□□□□ -0.2
LAMA4-220ENST00000523765 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
LAMA4-220ENST00000523765 SBF1O95248 1867 aa13.81□□□□□ -0.2
LAMA4-220ENST00000523765 SSFA2P28290 1259 aa13.81□□□□□ -0.2
LAMA4-220ENST00000523765 AMPHP49418 695 aa13.81□□□□□ -0.2
LAMA4-220ENST00000523765 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
LAMA4-220ENST00000523765 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-220ENST00000523765 PIGBQ92521 554 aa13.81□□□□□ -0.2
LAMA4-220ENST00000523765 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
LAMA4-220ENST00000523765 HSPA1AP0DMV8 641 aaKnown RBP13.8□□□□□ -0.2
LAMA4-220ENST00000523765 HSPA1BP0DMV9 641 aaKnown RBP13.8□□□□□ -0.2
LAMA4-220ENST00000523765 KCNA3P22001 575 aa13.8□□□□□ -0.2
LAMA4-220ENST00000523765 GNPATO15228 680 aa13.79□□□□□ -0.2
LAMA4-220ENST00000523765 FCHSD2O94868 740 aa13.79□□□□□ -0.2
LAMA4-220ENST00000523765 FSTL1Q12841 308 aa13.79□□□□□ -0.2
LAMA4-220ENST00000523765 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
LAMA4-220ENST00000523765 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-220ENST00000523765 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
LAMA4-220ENST00000523765 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
LAMA4-220ENST00000523765 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
LAMA4-220ENST00000523765 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
LAMA4-220ENST00000523765 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.21
LAMA4-220ENST00000523765 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
LAMA4-220ENST00000523765 SIK1P57059 783 aa13.77□□□□□ -0.21
LAMA4-220ENST00000523765 TGFB2P61812 414 aa13.77□□□□□ -0.21
LAMA4-220ENST00000523765 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
LAMA4-220ENST00000523765 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
LAMA4-220ENST00000523765 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-220ENST00000523765 SLC34A2O95436 690 aa13.76□□□□□ -0.21
LAMA4-220ENST00000523765 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
LAMA4-220ENST00000523765 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-220ENST00000523765 COG3Q96JB2 828 aa13.76□□□□□ -0.21
LAMA4-220ENST00000523765 TERF2IPQ9NYB0 399 aa13.76□□□□□ -0.21
LAMA4-220ENST00000523765 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
LAMA4-220ENST00000523765 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
LAMA4-220ENST00000523765 RNF181Q9P0P0 153 aa13.75□□□□□ -0.21
LAMA4-220ENST00000523765 SLC4A9Q96Q91 983 aa13.74□□□□□ -0.21
LAMA4-220ENST00000523765 MYH14Q7Z406 1995 aaKnown RBP13.73□□□□□ -0.21
LAMA4-220ENST00000523765 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
LAMA4-220ENST00000523765 KDM2BQ8NHM5 1336 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 GYS1P13807 737 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 ZEB1P37275 1124 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-220ENST00000523765 SMC1BQ8NDV3 1235 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 GGNBP2Q9H3C7 697 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 CCDC88AQ3V6T2 1871 aa13.72□□□□□ -0.21
LAMA4-220ENST00000523765 KDRP35968 1356 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 CHRNA5P30532 468 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 TMF1P82094 1093 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 RASSF7Q02833 373 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-220ENST00000523765 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
LAMA4-220ENST00000523765 ATG3Q9NT62 314 aa13.71□□□□□ -0.21
LAMA4-220ENST00000523765 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
LAMA4-220ENST00000523765 INSRP06213 1382 aa13.71□□□□□ -0.22
LAMA4-220ENST00000523765 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
LAMA4-220ENST00000523765 PITPNM1O00562 1244 aa13.7□□□□□ -0.22
LAMA4-220ENST00000523765 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
LAMA4-220ENST00000523765 FYB1O15117 783 aa13.69□□□□□ -0.22
LAMA4-220ENST00000523765 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
LAMA4-220ENST00000523765 TRAPPC3LQ5T215 181 aa13.69□□□□□ -0.22
LAMA4-220ENST00000523765 NLGN1Q8N2Q7 840 aa13.69□□□□□ -0.22
LAMA4-220ENST00000523765 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
LAMA4-220ENST00000523765 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
LAMA4-220ENST00000523765 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
LAMA4-220ENST00000523765 DDR1Q08345 913 aa13.68□□□□□ -0.22
LAMA4-220ENST00000523765 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
LAMA4-220ENST00000523765 CARD11Q9BXL7 1154 aa13.68□□□□□ -0.22
LAMA4-220ENST00000523765 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
LAMA4-220ENST00000523765 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
LAMA4-220ENST00000523765 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
LAMA4-220ENST00000523765 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
LAMA4-220ENST00000523765 KDM6AO15550 1401 aaPredicted RBP13.67□□□□□ -0.22
LAMA4-220ENST00000523765 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
LAMA4-220ENST00000523765 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
LAMA4-220ENST00000523765 POTECB2RU33 542 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 FOXN1O15353 648 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 TESK2Q96S53 571 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 ANKRD26Q9UPS8 1709 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 FLT4P35916 1363 aa13.66□□□□□ -0.22
LAMA4-220ENST00000523765 AFDNP55196 1824 aaKnown RBP13.65□□□□□ -0.22
LAMA4-220ENST00000523765 FKBP8Q14318 412 aa13.65□□□□□ -0.22
LAMA4-220ENST00000523765 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
LAMA4-220ENST00000523765 TJP1Q07157 1748 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms