RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ORAI2Q96SN7 254 aa15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 GOLGA6L19H0YKK7 550 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 EXOC5O00471 708 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 VAMP4O75379 141 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 STK3Q13188 491 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 CHPF2Q9P2E5 772 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 GLRX3O76003 335 aaKnown RBP15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 UPF3BQ9BZI7 483 aaKnown RBP15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 PREX2Q70Z35 1606 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 ZFYVE9O95405 1425 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 TSHZ3Q63HK5 1081 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 STK11IPQ8N1F8 1099 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 NGLY1Q96IV0 654 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 PIK3R4Q99570 1358 aa15.67■□□□□ 0.1
PCDHGB1-201ENST00000523390 RAB11FIP3O75154 756 aa15.66■□□□□ 0.1
PCDHGB1-201ENST00000523390 GPTP24298 496 aa15.66■□□□□ 0.1
PCDHGB1-201ENST00000523390 PPP1R42Q7Z4L9 355 aa15.66■□□□□ 0.1
PCDHGB1-201ENST00000523390 TRPM2O94759 1503 aa15.66■□□□□ 0.1
PCDHGB1-201ENST00000523390 HOXC9P31274 260 aa15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 JAKMIP1Q96N16 626 aaKnown RBP15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 FIBPO43427 364 aa15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 PRPF40AO75400 957 aaKnown RBP15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 METTL24Q5JXM2 366 aa15.65■□□□□ 0.1
PCDHGB1-201ENST00000523390 PIP4K2AP48426 406 aaPredicted RBP15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 BLOC1S2Q6QNY1 142 aa15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 IL13P35225 146 aa15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 CAVIN1Q6NZI2 390 aaKnown RBP15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 GNL3LQ9NVN8 582 aaKnown RBP15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
PCDHGB1-201ENST00000523390 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 IDH1O75874 414 aaKnown RBP15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 CCDC73Q6ZRK6 1079 aa15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 PES1O00541 588 aaKnown RBP15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 ATP2B1P20020 1258 aa15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 RNF214Q8ND24 703 aa15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 ZCRB1Q8TBF4 217 aaKnown RBP15.63■□□□□ 0.09
PCDHGB1-201ENST00000523390 PDCP20941 246 aa15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 HDAC1Q13547 482 aaPredicted RBP15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 TRMT112Q9UI30 125 aaKnown RBP15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 PLA2R1Q13018 1463 aa15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 MLH3Q9UHC1 1453 aa15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
PCDHGB1-201ENST00000523390 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 IP6K1Q92551 441 aa15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 TPD52L1Q16890 204 aaPredicted RBP15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 TBC1D9Q6ZT07 1266 aa15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 ANKRD13DQ6ZTN6 518 aa15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 BMP2KLQ5H9B9 411 aa15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
PCDHGB1-201ENST00000523390 IGHMBP2P38935 993 aaKnown RBP15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 CEBPZQ03701 1054 aaKnown RBP15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 MAGI2Q86UL8 1455 aa15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 IFIT5Q13325 482 aaKnown RBP15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 PDRG1Q9NUG6 133 aa15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 PRPF40BQ6NWY9 871 aaKnown RBP15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 ABCF2Q9UG63 623 aa15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 CDC42BPAQ5VT25 1732 aa15.6■□□□□ 0.09
PCDHGB1-201ENST00000523390 ANKRD44Q8N8A2 993 aa15.59■□□□□ 0.09
PCDHGB1-201ENST00000523390 CASTP20810 708 aaKnown RBP15.59■□□□□ 0.09
PCDHGB1-201ENST00000523390 CWC22Q9HCG8 908 aaKnown RBP15.59■□□□□ 0.09
PCDHGB1-201ENST00000523390 IFIT1P09914 478 aaKnown RBP15.59■□□□□ 0.09
PCDHGB1-201ENST00000523390 ARID3AQ99856 593 aa15.59■□□□□ 0.09
PCDHGB1-201ENST00000523390 NUCB1Q02818 461 aa15.58■□□□□ 0.09
PCDHGB1-201ENST00000523390 MAP3K5Q99683 1374 aa15.58■□□□□ 0.09
PCDHGB1-201ENST00000523390 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.09
PCDHGB1-201ENST00000523390 SASS6Q6UVJ0 657 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 TSPOAP1O95153 1857 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 ECHDC1Q9NTX5 307 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 LRP2BPQ9P2M1 347 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 METP08581 1390 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 SDF4Q9BRK5 362 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 TBC1D2Q9BYX2 928 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 RAI14Q9P0K7 980 aa15.58■□□□□ 0.08
PCDHGB1-201ENST00000523390 CFAP74Q9C0B2 1584 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 PLEKHG3A1L390 1219 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 ANKRD1Q15327 319 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 LARP1BQ659C4 914 aaKnown RBP15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 ZSCAN25Q6NSZ9 544 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 CWC25Q9NXE8 425 aaPredicted RBP15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 ZNF652Q9Y2D9 606 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 MBD3O95983 291 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
PCDHGB1-201ENST00000523390 C16orf71Q8IYS4 520 aaPredicted RBP15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 AKAP2Q9Y2D5 859 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms