RNA–Protein interactions for RNA: ENST00000523210.1

IGHV3-65-201, Transcript of immunoglobulin heavy variable 3-65 (pseudogene), humanhuman

BASIC

Gene IGHV3-65, Length 341 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-65-201ENST00000523210 SIK1P57059 783 aa22.79■■□□□ 1.24
IGHV3-65-201ENST00000523210 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
IGHV3-65-201ENST00000523210 AKT1S1Q96B36 256 aa22.79■■□□□ 1.24
IGHV3-65-201ENST00000523210 NEFMP07197 916 aa22.78■■□□□ 1.24
IGHV3-65-201ENST00000523210 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
IGHV3-65-201ENST00000523210 SCN11AQ9UI33 1791 aa22.78■■□□□ 1.24
IGHV3-65-201ENST00000523210 CEMIPQ8WUJ3 1361 aa22.76■■□□□ 1.23
IGHV3-65-201ENST00000523210 HTATSF1O43719 755 aaKnown RBP22.75■■□□□ 1.23
IGHV3-65-201ENST00000523210 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
IGHV3-65-201ENST00000523210 MAPK8IP3Q9UPT6 1336 aa22.74■■□□□ 1.23
IGHV3-65-201ENST00000523210 NFE2L2Q16236 605 aa22.73■■□□□ 1.23
IGHV3-65-201ENST00000523210 SLC4A9Q96Q91 983 aa22.73■■□□□ 1.23
IGHV3-65-201ENST00000523210 ATP6V1AP38606 617 aa22.72■■□□□ 1.23
IGHV3-65-201ENST00000523210 TEFQ10587 303 aa22.72■■□□□ 1.23
IGHV3-65-201ENST00000523210 ITPK1Q13572 414 aa22.72■■□□□ 1.23
IGHV3-65-201ENST00000523210 RTF1Q92541 710 aaKnown RBP22.72■■□□□ 1.23
IGHV3-65-201ENST00000523210 ADAMTS8Q9UP79 889 aa22.72■■□□□ 1.23
IGHV3-65-201ENST00000523210 RBM42Q9BTD8 480 aaKnown RBP22.71■■□□□ 1.23
IGHV3-65-201ENST00000523210 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
IGHV3-65-201ENST00000523210 PDGFDQ9GZP0 370 aaPredicted RBP22.7■■□□□ 1.22
IGHV3-65-201ENST00000523210 TFCP2L1Q9NZI6 479 aa22.7■■□□□ 1.22
IGHV3-65-201ENST00000523210 SLC39A6Q13433 755 aa22.69■■□□□ 1.22
IGHV3-65-201ENST00000523210 CCDC184Q52MB2 194 aa22.69■■□□□ 1.22
IGHV3-65-201ENST00000523210 MCM10Q7L590 875 aa22.69■■□□□ 1.22
IGHV3-65-201ENST00000523210 PNPLA7Q6ZV29 1317 aa22.68■■□□□ 1.22
IGHV3-65-201ENST00000523210 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
IGHV3-65-201ENST00000523210 RUNDC1Q96C34 613 aa22.68■■□□□ 1.22
IGHV3-65-201ENST00000523210 SRCAPQ6ZRS2 3230 aa22.68■■□□□ 1.22
IGHV3-65-201ENST00000523210 C5P01031 1676 aa22.68■■□□□ 1.22
IGHV3-65-201ENST00000523210 ZNF831Q5JPB2 1677 aa22.68■■□□□ 1.22
IGHV3-65-201ENST00000523210 DCTN1Q14203 1278 aa22.67■■□□□ 1.22
IGHV3-65-201ENST00000523210 CASZ1Q86V15 1759 aa22.67■■□□□ 1.22
IGHV3-65-201ENST00000523210 CCDC146Q8IYE0 955 aa22.66■■□□□ 1.22
IGHV3-65-201ENST00000523210 AK7Q96M32 723 aa22.66■■□□□ 1.22
IGHV3-65-201ENST00000523210 C4BP0C0L5 1744 aa22.65■■□□□ 1.22
IGHV3-65-201ENST00000523210 TMPOP42166 694 aaKnown RBP22.65■■□□□ 1.22
IGHV3-65-201ENST00000523210 ZNF790Q6PG37 636 aa22.65■■□□□ 1.22
IGHV3-65-201ENST00000523210 TAF1LQ8IZX4 1826 aa22.65■■□□□ 1.22
IGHV3-65-201ENST00000523210 KCPQ6ZWJ8 1503 aa22.65■■□□□ 1.22
IGHV3-65-201ENST00000523210 RC3H1Q5TC82 1133 aaKnown RBP22.64■■□□□ 1.21
IGHV3-65-201ENST00000523210 TTC5Q8N0Z6 440 aa22.64■■□□□ 1.21
IGHV3-65-201ENST00000523210 LRP5O75197 1615 aa22.64■■□□□ 1.21
IGHV3-65-201ENST00000523210 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.21
IGHV3-65-201ENST00000523210 CNTNAP4Q9C0A0 1308 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 QSER1Q2KHR3 1735 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 BTBD11A6QL63 1104 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 RIPK4P57078 832 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 VSIG10Q8N0Z9 540 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 FLAD1Q8NFF5 587 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 SLC16A10Q8TF71 515 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 SPON1Q9HCB6 807 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 MRS2Q9HD23 443 aa22.63■■□□□ 1.21
IGHV3-65-201ENST00000523210 ZBTB7AO95365 584 aa22.62■■□□□ 1.21
IGHV3-65-201ENST00000523210 COL23A1Q86Y22 540 aaPredicted RBP22.62■■□□□ 1.21
IGHV3-65-201ENST00000523210 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
IGHV3-65-201ENST00000523210 MTFR1LQ9H019 292 aa22.62■■□□□ 1.21
IGHV3-65-201ENST00000523210 SIPA1L3O60292 1781 aaPredicted RBP22.62■■□□□ 1.21
IGHV3-65-201ENST00000523210 CICQ96RK0 1608 aaPredicted RBP22.61■■□□□ 1.21
IGHV3-65-201ENST00000523210 SSFA2P28290 1259 aa22.61■■□□□ 1.21
IGHV3-65-201ENST00000523210 LMOD3Q0VAK6 560 aa22.61■■□□□ 1.21
IGHV3-65-201ENST00000523210 TAF7Q15545 349 aaPredicted RBP22.61■■□□□ 1.21
IGHV3-65-201ENST00000523210 AMIGO3Q86WK7 504 aa22.61■■□□□ 1.21
IGHV3-65-201ENST00000523210 GNPATO15228 680 aa22.6■■□□□ 1.21
IGHV3-65-201ENST00000523210 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
IGHV3-65-201ENST00000523210 ZNF496Q96IT1 587 aaPredicted RBP22.6■■□□□ 1.21
IGHV3-65-201ENST00000523210 KCNQ3O43525 872 aa22.59■■□□□ 1.21
IGHV3-65-201ENST00000523210 THUMPD2Q9BTF0 503 aaKnown RBP22.59■■□□□ 1.21
IGHV3-65-201ENST00000523210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.58■■□□□ 1.21
IGHV3-65-201ENST00000523210 FMNL2Q96PY5 1086 aa22.58■■□□□ 1.21
IGHV3-65-201ENST00000523210 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.21
IGHV3-65-201ENST00000523210 TUBGCP6Q96RT7 1819 aa22.58■■□□□ 1.21
IGHV3-65-201ENST00000523210 HEG1Q9ULI3 1381 aa22.58■■□□□ 1.21
IGHV3-65-201ENST00000523210 UBR2Q8IWV8 1755 aa22.58■■□□□ 1.2
IGHV3-65-201ENST00000523210 COL5A3P25940 1745 aaPredicted RBP22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 PTGER2P43116 358 aa22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 CRKLP46109 303 aaKnown RBP22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 ATF5Q9Y2D1 282 aaPredicted RBP22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 RTCBQ9Y3I0 505 aaKnown RBP22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 DLG5Q8TDM6 1919 aa22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 TJP1Q07157 1748 aa22.57■■□□□ 1.2
IGHV3-65-201ENST00000523210 RPS6KA4O75676 772 aa22.56■■□□□ 1.2
IGHV3-65-201ENST00000523210 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
IGHV3-65-201ENST00000523210 SGIP1Q9BQI5 828 aa22.56■■□□□ 1.2
IGHV3-65-201ENST00000523210 TRIM35Q9UPQ4 493 aa22.56■■□□□ 1.2
IGHV3-65-201ENST00000523210 PHF14O94880 888 aa22.55■■□□□ 1.2
IGHV3-65-201ENST00000523210 ADRA2BP18089 450 aa22.55■■□□□ 1.2
IGHV3-65-201ENST00000523210 NEUROD2Q15784 382 aa22.55■■□□□ 1.2
IGHV3-65-201ENST00000523210 INTS5Q6P9B9 1019 aaKnown RBP22.55■■□□□ 1.2
IGHV3-65-201ENST00000523210 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
IGHV3-65-201ENST00000523210 TEX13AQ9BXU3 409 aaPredicted RBP22.55■■□□□ 1.2
IGHV3-65-201ENST00000523210 UBR3Q6ZT12 1888 aa22.54■■□□□ 1.2
IGHV3-65-201ENST00000523210 APAF1O14727 1248 aa22.54■■□□□ 1.2
IGHV3-65-201ENST00000523210 MSH5O43196 834 aa22.54■■□□□ 1.2
IGHV3-65-201ENST00000523210 TRAPPC3LQ5T215 181 aa22.53■■□□□ 1.2
IGHV3-65-201ENST00000523210 CCDC87Q9NVE4 849 aa22.53■■□□□ 1.2
IGHV3-65-201ENST00000523210 MIS18AQ9NYP9 233 aa22.53■■□□□ 1.2
IGHV3-65-201ENST00000523210 STARD3NLO95772 234 aa22.52■■□□□ 1.2
IGHV3-65-201ENST00000523210 BABAM1Q9NWV8 329 aa22.52■■□□□ 1.2
IGHV3-65-201ENST00000523210 ARHGEF1Q92888 912 aaKnown RBP22.51■■□□□ 1.19
IGHV3-65-201ENST00000523210 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms