RNA–Protein interactions for RNA: ENST00000523149.5

EXTL3-213, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 5 BASIC

Gene EXTL3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-213ENST00000523149 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
EXTL3-213ENST00000523149 ASAP1Q9ULH1 1129 aa26.86■■□□□ 1.89
EXTL3-213ENST00000523149 TEFQ10587 303 aa26.86■■□□□ 1.89
EXTL3-213ENST00000523149 MIS18AQ9NYP9 233 aa26.86■■□□□ 1.89
EXTL3-213ENST00000523149 LMOD3Q0VAK6 560 aa26.85■■□□□ 1.89
EXTL3-213ENST00000523149 SLC39A6Q13433 755 aa26.84■■□□□ 1.89
EXTL3-213ENST00000523149 CCDC27Q2M243 656 aa26.84■■□□□ 1.89
EXTL3-213ENST00000523149 ATG3Q9NT62 314 aa26.83■■□□□ 1.89
EXTL3-213ENST00000523149 KDM3BQ7LBC6 1761 aa26.83■■□□□ 1.88
EXTL3-213ENST00000523149 KCNQ3O43525 872 aa26.82■■□□□ 1.88
EXTL3-213ENST00000523149 APBA3O96018 575 aa26.82■■□□□ 1.88
EXTL3-213ENST00000523149 LY75O60449 1722 aa26.82■■□□□ 1.88
EXTL3-213ENST00000523149 HNRNPUQ00839 825 aaKnown RBP eCLIP26.81■■□□□ 1.88
EXTL3-213ENST00000523149 ZNF521Q96K83 1311 aa26.81■■□□□ 1.88
EXTL3-213ENST00000523149 UBR2Q8IWV8 1755 aa26.81■■□□□ 1.88
EXTL3-213ENST00000523149 DEFB132Q7Z7B7 95 aa26.81■■□□□ 1.88
EXTL3-213ENST00000523149 TAF7Q15545 349 aaPredicted RBP26.79■■□□□ 1.88
EXTL3-213ENST00000523149 BTBD11A6QL63 1104 aa26.79■■□□□ 1.88
EXTL3-213ENST00000523149 NCBP3Q53F19 620 aaKnown RBP26.79■■□□□ 1.88
EXTL3-213ENST00000523149 SPINK5Q9NQ38 1064 aaPredicted RBP26.79■■□□□ 1.88
EXTL3-213ENST00000523149 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
EXTL3-213ENST00000523149 PALLDQ8WX93 1383 aa26.78■■□□□ 1.88
EXTL3-213ENST00000523149 KCNQ4P56696 695 aa26.78■■□□□ 1.88
EXTL3-213ENST00000523149 LAS1LQ9Y4W2 734 aaKnown RBP26.78■■□□□ 1.88
EXTL3-213ENST00000523149 EN1Q05925 392 aaPredicted RBP26.77■■□□□ 1.88
EXTL3-213ENST00000523149 PROM2Q8N271 834 aa26.76■■□□□ 1.87
EXTL3-213ENST00000523149 SLC4A9Q96Q91 983 aa26.76■■□□□ 1.87
EXTL3-213ENST00000523149 RGPD3A6NKT7 1758 aaPredicted RBP26.75■■□□□ 1.87
EXTL3-213ENST00000523149 RGPD4Q7Z3J3 1758 aa26.75■■□□□ 1.87
EXTL3-213ENST00000523149 ZNF790Q6PG37 636 aa26.75■■□□□ 1.87
EXTL3-213ENST00000523149 PTCD1O75127 700 aaKnown RBP26.74■■□□□ 1.87
EXTL3-213ENST00000523149 ZNF853P0CG23 659 aa26.74■■□□□ 1.87
EXTL3-213ENST00000523149 CHL1O00533 1208 aa26.73■■□□□ 1.87
EXTL3-213ENST00000523149 SF3B2Q13435 895 aaKnown RBP26.73■■□□□ 1.87
EXTL3-213ENST00000523149 EZH2Q15910 746 aaKnown RBP26.73■■□□□ 1.87
EXTL3-213ENST00000523149 CCDC125Q86Z20 511 aa26.73■■□□□ 1.87
EXTL3-213ENST00000523149 CAMKK2Q96RR4 588 aa26.73■■□□□ 1.87
EXTL3-213ENST00000523149 PLSCR1O15162 318 aa26.72■■□□□ 1.87
EXTL3-213ENST00000523149 NGEFQ8N5V2 710 aa26.72■■□□□ 1.87
EXTL3-213ENST00000523149 ZNF496Q96IT1 587 aaPredicted RBP26.72■■□□□ 1.87
EXTL3-213ENST00000523149 CFAP44Q96MT7 982 aa26.72■■□□□ 1.87
EXTL3-213ENST00000523149 TSPYL4Q9UJ04 414 aa26.72■■□□□ 1.87
EXTL3-213ENST00000523149 TSR2Q969E8 191 aaKnown RBP26.71■■□□□ 1.87
EXTL3-213ENST00000523149 MBIPQ9NS73 344 aa26.71■■□□□ 1.87
EXTL3-213ENST00000523149 LRRC4BQ9NT99 713 aa26.71■■□□□ 1.87
EXTL3-213ENST00000523149 TJP1Q07157 1748 aa26.71■■□□□ 1.87
EXTL3-213ENST00000523149 RREB1Q92766 1687 aa26.71■■□□□ 1.87
EXTL3-213ENST00000523149 WDR63Q8IWG1 891 aa26.71■■□□□ 1.87
EXTL3-213ENST00000523149 YTHDC1Q96MU7 727 aaKnown RBP26.71■■□□□ 1.87
EXTL3-213ENST00000523149 IFT57Q9NWB7 429 aa26.71■■□□□ 1.87
EXTL3-213ENST00000523149 C5P01031 1676 aa26.7■■□□□ 1.87
EXTL3-213ENST00000523149 CDCA7LQ96GN5 454 aa26.7■■□□□ 1.86
EXTL3-213ENST00000523149 RBM42Q9BTD8 480 aaKnown RBP26.7■■□□□ 1.86
EXTL3-213ENST00000523149 TAF1LQ8IZX4 1826 aa26.7■■□□□ 1.86
EXTL3-213ENST00000523149 LOC102724428A0A0B4J2F2 783 aa26.69■■□□□ 1.86
EXTL3-213ENST00000523149 BAG6P46379 1132 aa26.69■■□□□ 1.86
EXTL3-213ENST00000523149 SIK1P57059 783 aa26.69■■□□□ 1.86
EXTL3-213ENST00000523149 TXNRD1Q16881 649 aa26.69■■□□□ 1.86
EXTL3-213ENST00000523149 KRT24Q2M2I5 525 aa26.69■■□□□ 1.86
EXTL3-213ENST00000523149 SMARCC1Q92922 1105 aaPredicted RBP26.69■■□□□ 1.86
EXTL3-213ENST00000523149 TTC5Q8N0Z6 440 aa26.69■■□□□ 1.86
EXTL3-213ENST00000523149 NUP188Q5SRE5 1749 aa26.68■■□□□ 1.86
EXTL3-213ENST00000523149 PRAMEF22A3QJZ6 481 aa26.68■■□□□ 1.86
EXTL3-213ENST00000523149 IL16Q14005 1332 aa26.67■■□□□ 1.86
EXTL3-213ENST00000523149 GNAI1P63096 354 aa26.67■■□□□ 1.86
EXTL3-213ENST00000523149 CALD1Q05682 793 aaKnown RBP26.67■■□□□ 1.86
EXTL3-213ENST00000523149 ITPK1Q13572 414 aa26.67■■□□□ 1.86
EXTL3-213ENST00000523149 ZNF831Q5JPB2 1677 aa26.67■■□□□ 1.86
EXTL3-213ENST00000523149 EIF4A1P60842 406 aaKnown RBP26.66■■□□□ 1.86
EXTL3-213ENST00000523149 CCNL1Q9UK58 526 aaPredicted RBP26.66■■□□□ 1.86
EXTL3-213ENST00000523149 COL5A3P25940 1745 aaPredicted RBP26.65■■□□□ 1.86
EXTL3-213ENST00000523149 FANCIQ9NVI1 1328 aa26.65■■□□□ 1.86
EXTL3-213ENST00000523149 HEG1Q9ULI3 1381 aa26.64■■□□□ 1.86
EXTL3-213ENST00000523149 GOLGA2Q08379 1002 aa26.64■■□□□ 1.86
EXTL3-213ENST00000523149 BABAM1Q9NWV8 329 aa26.64■■□□□ 1.86
EXTL3-213ENST00000523149 CICQ96RK0 1608 aaPredicted RBP26.64■■□□□ 1.86
EXTL3-213ENST00000523149 ZBED9Q6R2W3 1325 aa26.64■■□□□ 1.86
EXTL3-213ENST00000523149 ATP6V1AP38606 617 aa26.63■■□□□ 1.85
EXTL3-213ENST00000523149 SOCS7O14512 581 aa26.63■■□□□ 1.85
EXTL3-213ENST00000523149 FMNL2Q96PY5 1086 aa26.63■■□□□ 1.85
EXTL3-213ENST00000523149 DNAJC10Q8IXB1 793 aa26.62■■□□□ 1.85
EXTL3-213ENST00000523149 LINC00116Q8NCU8 138 aa26.61■■□□□ 1.85
EXTL3-213ENST00000523149 MYH14Q7Z406 1995 aaKnown RBP26.61■■□□□ 1.85
EXTL3-213ENST00000523149 SLFN5Q08AF3 891 aa26.61■■□□□ 1.85
EXTL3-213ENST00000523149 C8orf58Q8NAV2 365 aa26.6■■□□□ 1.85
EXTL3-213ENST00000523149 SLC27A3Q5K4L6 730 aa26.59■■□□□ 1.85
EXTL3-213ENST00000523149 C4BP0C0L5 1744 aa26.59■■□□□ 1.85
EXTL3-213ENST00000523149 LAMB4A4D0S4 1761 aa26.59■■□□□ 1.85
EXTL3-213ENST00000523149 GIGYF1O75420 1035 aaPredicted RBP26.58■■□□□ 1.85
EXTL3-213ENST00000523149 TSPYL6Q8N831 410 aa26.58■■□□□ 1.85
EXTL3-213ENST00000523149 ELL2O00472 640 aaPredicted RBP26.58■■□□□ 1.85
EXTL3-213ENST00000523149 USP16Q9Y5T5 823 aa26.58■■□□□ 1.85
EXTL3-213ENST00000523149 TRMT2AQ8IZ69 625 aaKnown RBP26.57■■□□□ 1.84
EXTL3-213ENST00000523149 ANO8Q9HCE9 1232 aaPredicted RBP26.57■■□□□ 1.84
EXTL3-213ENST00000523149 E9PSI1 815 aa26.56■■□□□ 1.84
EXTL3-213ENST00000523149 VSIG10Q8N0Z9 540 aa26.56■■□□□ 1.84
EXTL3-213ENST00000523149 TUBGCP6Q96RT7 1819 aa26.56■■□□□ 1.84
EXTL3-213ENST00000523149 SNRPA1P09661 255 aaKnown RBP26.56■■□□□ 1.84
EXTL3-213ENST00000523149 EXOSC9Q06265 439 aaKnown RBP26.55■■□□□ 1.84
EXTL3-213ENST00000523149 ZNF827Q17R98 1081 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms