RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
RAB11FIP1-204ENST00000522774 EXOC6BQ9Y2D4 811 aa13.32□□□□□ -0.28
RAB11FIP1-204ENST00000522774 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
RAB11FIP1-204ENST00000522774 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
RAB11FIP1-204ENST00000522774 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
RAB11FIP1-204ENST00000522774 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
RAB11FIP1-204ENST00000522774 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 MED1Q15648 1581 aaPredicted RBP13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 GNAI3P08754 354 aa13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 USP26Q9BXU7 913 aa13.3□□□□□ -0.28
RAB11FIP1-204ENST00000522774 K7ELQ4 463 aaPredicted RBP13.29□□□□□ -0.28
RAB11FIP1-204ENST00000522774 KCNQ3O43525 872 aa13.29□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PDE1AP54750 535 aa13.29□□□□□ -0.28
RAB11FIP1-204ENST00000522774 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
RAB11FIP1-204ENST00000522774 N4BP2Q86UW6 1770 aaPredicted RBP13.29□□□□□ -0.28
RAB11FIP1-204ENST00000522774 LRRFIP2Q9Y608 721 aaKnown RBP13.29□□□□□ -0.28
RAB11FIP1-204ENST00000522774 GCP02774 474 aa13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 EIF2S2P20042 333 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 USP44Q9H0E7 712 aa13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 OSBPL3Q9H4L5 887 aa13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
RAB11FIP1-204ENST00000522774 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
RAB11FIP1-204ENST00000522774 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.28
RAB11FIP1-204ENST00000522774 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.28
RAB11FIP1-204ENST00000522774 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PXDNQ92626 1479 aa13.27□□□□□ -0.29
RAB11FIP1-204ENST00000522774 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
RAB11FIP1-204ENST00000522774 TNPO1Q92973 898 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 LRRCC1Q9C099 1032 aa13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 CHPF2Q9P2E5 772 aa13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 SLIT3O75094 1523 aa13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP1-204ENST00000522774 ANXA1P04083 346 aa13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 RABEP1Q15276 862 aa13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 TEFQ10587 303 aa13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 RAB3GAP1Q15042 981 aa13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 GZF1Q9H116 711 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 AXIN2Q9Y2T1 843 aa13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 TUBGCP6Q96RT7 1819 aa13.25□□□□□ -0.29
RAB11FIP1-204ENST00000522774 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 TRAK2O60296 914 aa13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 EIF5BO60841 1220 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 MX1P20591 662 aa13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 NCAPD2Q15021 1401 aa13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 TRPM3Q9HCF6 1732 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
RAB11FIP1-204ENST00000522774 ERC2O15083 957 aa13.23□□□□□ -0.29
RAB11FIP1-204ENST00000522774 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP1-204ENST00000522774 HOXB7P09629 217 aa13.23□□□□□ -0.29
RAB11FIP1-204ENST00000522774 KRT28Q7Z3Y7 464 aa13.23□□□□□ -0.29
RAB11FIP1-204ENST00000522774 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 REC8O95072 547 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
RAB11FIP1-204ENST00000522774 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
RAB11FIP1-204ENST00000522774 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
RAB11FIP1-204ENST00000522774 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.29
RAB11FIP1-204ENST00000522774 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.29
RAB11FIP1-204ENST00000522774 SSFA2P28290 1259 aa13.21□□□□□ -0.29
RAB11FIP1-204ENST00000522774 ARXQ96QS3 562 aa13.21□□□□□ -0.29
RAB11FIP1-204ENST00000522774 ADCY9O60503 1353 aa13.21□□□□□ -0.3
RAB11FIP1-204ENST00000522774 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.3
RAB11FIP1-204ENST00000522774 STAP2Q9UGK3 403 aa13.21□□□□□ -0.3
RAB11FIP1-204ENST00000522774 RGPD5Q99666 1765 aa13.21□□□□□ -0.3
RAB11FIP1-204ENST00000522774 CAMTA1Q9Y6Y1 1673 aa13.2□□□□□ -0.3
RAB11FIP1-204ENST00000522774 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
RAB11FIP1-204ENST00000522774 POLA2Q14181 598 aa13.2□□□□□ -0.3
RAB11FIP1-204ENST00000522774 AK9Q5TCS8 1911 aa13.2□□□□□ -0.3
RAB11FIP1-204ENST00000522774 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
RAB11FIP1-204ENST00000522774 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms