RNA–Protein interactions for RNA: ENST00000522574.5

TNIP1-215, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 2

Gene TNIP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-215ENST00000522574 FAM182BQ5T319 152 aa12.31□□□□□ -0.44
TNIP1-215ENST00000522574 TRMT2AQ8IZ69 625 aaKnown RBP12.31□□□□□ -0.44
TNIP1-215ENST00000522574 PIGBQ92521 554 aa12.31□□□□□ -0.44
TNIP1-215ENST00000522574 MYH16Q9H6N6 1097 aa12.31□□□□□ -0.44
TNIP1-215ENST00000522574 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
TNIP1-215ENST00000522574 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
TNIP1-215ENST00000522574 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
TNIP1-215ENST00000522574 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
TNIP1-215ENST00000522574 KCNQ2O43526 872 aa12.3□□□□□ -0.44
TNIP1-215ENST00000522574 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
TNIP1-215ENST00000522574 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
TNIP1-215ENST00000522574 ACSBG1Q96GR2 724 aa12.3□□□□□ -0.44
TNIP1-215ENST00000522574 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
TNIP1-215ENST00000522574 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
TNIP1-215ENST00000522574 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
TNIP1-215ENST00000522574 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
TNIP1-215ENST00000522574 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
TNIP1-215ENST00000522574 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
TNIP1-215ENST00000522574 TSPYL4Q9UJ04 414 aa12.29□□□□□ -0.44
TNIP1-215ENST00000522574 ADAMTS7Q9UKP4 1686 aa12.28□□□□□ -0.44
TNIP1-215ENST00000522574 ATG3Q9NT62 314 aa12.28□□□□□ -0.44
TNIP1-215ENST00000522574 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.45
TNIP1-215ENST00000522574 SLC39A6Q13433 755 aa12.27□□□□□ -0.45
TNIP1-215ENST00000522574 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.45
TNIP1-215ENST00000522574 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
TNIP1-215ENST00000522574 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
TNIP1-215ENST00000522574 MRC1P22897 1456 aa12.26□□□□□ -0.45
TNIP1-215ENST00000522574 KCNQ3O43525 872 aa12.26□□□□□ -0.45
TNIP1-215ENST00000522574 TRIM37O94972 964 aa12.26□□□□□ -0.45
TNIP1-215ENST00000522574 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
TNIP1-215ENST00000522574 FANCIQ9NVI1 1328 aa12.25□□□□□ -0.45
TNIP1-215ENST00000522574 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
TNIP1-215ENST00000522574 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
TNIP1-215ENST00000522574 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
TNIP1-215ENST00000522574 SCN11AQ9UI33 1791 aa12.25□□□□□ -0.45
TNIP1-215ENST00000522574 BRWD3Q6RI45 1802 aa12.24□□□□□ -0.45
TNIP1-215ENST00000522574 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
TNIP1-215ENST00000522574 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
TNIP1-215ENST00000522574 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
TNIP1-215ENST00000522574 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
TNIP1-215ENST00000522574 PLSCR1O15162 318 aa12.23□□□□□ -0.45
TNIP1-215ENST00000522574 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
TNIP1-215ENST00000522574 C8orf58Q8NAV2 365 aa12.23□□□□□ -0.45
TNIP1-215ENST00000522574 TEX13AQ9BXU3 409 aaPredicted RBP12.23□□□□□ -0.45
TNIP1-215ENST00000522574 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
TNIP1-215ENST00000522574 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
TNIP1-215ENST00000522574 PTCD1O75127 700 aaKnown RBP12.22□□□□□ -0.45
TNIP1-215ENST00000522574 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
TNIP1-215ENST00000522574 HOXB7P09629 217 aa12.22□□□□□ -0.45
TNIP1-215ENST00000522574 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
TNIP1-215ENST00000522574 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
TNIP1-215ENST00000522574 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
TNIP1-215ENST00000522574 VAMP4O75379 141 aa12.21□□□□□ -0.45
TNIP1-215ENST00000522574 APBA3O96018 575 aa12.21□□□□□ -0.45
TNIP1-215ENST00000522574 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
TNIP1-215ENST00000522574 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
TNIP1-215ENST00000522574 TOGARAM1Q9Y4F4 1720 aa12.21□□□□□ -0.46
TNIP1-215ENST00000522574 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
TNIP1-215ENST00000522574 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
TNIP1-215ENST00000522574 SIK1P57059 783 aa12.2□□□□□ -0.46
TNIP1-215ENST00000522574 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
TNIP1-215ENST00000522574 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
TNIP1-215ENST00000522574 TSPYL6Q8N831 410 aa12.2□□□□□ -0.46
TNIP1-215ENST00000522574 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
TNIP1-215ENST00000522574 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
TNIP1-215ENST00000522574 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
TNIP1-215ENST00000522574 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
TNIP1-215ENST00000522574 PALLDQ8WX93 1383 aa12.19□□□□□ -0.46
TNIP1-215ENST00000522574 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
TNIP1-215ENST00000522574 ITGB4P16144 1822 aa12.19□□□□□ -0.46
TNIP1-215ENST00000522574 STARD3NLO95772 234 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 NHSQ6T4R5 1651 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 PROM2Q8N271 834 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
TNIP1-215ENST00000522574 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
TNIP1-215ENST00000522574 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
TNIP1-215ENST00000522574 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 PRAMEF22A3QJZ6 481 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
TNIP1-215ENST00000522574 EIF2S2P20042 333 aaKnown RBP12.16□□□□□ -0.46
TNIP1-215ENST00000522574 BAG6P46379 1132 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 ITPK1Q13572 414 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
TNIP1-215ENST00000522574 HDGFL1Q5TGJ6 251 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 CAMKK2Q96RR4 588 aa12.16□□□□□ -0.46
TNIP1-215ENST00000522574 CCNL1Q9UK58 526 aaPredicted RBP12.16□□□□□ -0.46
TNIP1-215ENST00000522574 VIRMAQ69YN4 1812 aaKnown RBP12.15□□□□□ -0.46
TNIP1-215ENST00000522574 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
TNIP1-215ENST00000522574 YY1P25490 414 aa12.15□□□□□ -0.46
TNIP1-215ENST00000522574 RARSP54136 660 aaKnown RBP12.15□□□□□ -0.46
TNIP1-215ENST00000522574 LRRC4BQ9NT99 713 aa12.15□□□□□ -0.46
TNIP1-215ENST00000522574 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
TNIP1-215ENST00000522574 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
TNIP1-215ENST00000522574 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms