RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 RGS12O14924 1447 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 KIF1AQ12756 1690 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
PVT1-213ENST00000522414 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
PVT1-213ENST00000522414 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
PVT1-213ENST00000522414 BLOC1S3Q6QNY0 202 aa11.73□□□□□ -0.53
PVT1-213ENST00000522414 EP400Q96L91 3159 aa11.73□□□□□ -0.53
PVT1-213ENST00000522414 BCL9LQ86UU0 1499 aa11.72□□□□□ -0.53
PVT1-213ENST00000522414 MINK1Q8N4C8 1332 aaPredicted RBP11.72□□□□□ -0.53
PVT1-213ENST00000522414 SLC19A1P41440 591 aa11.72□□□□□ -0.53
PVT1-213ENST00000522414 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
PVT1-213ENST00000522414 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
PVT1-213ENST00000522414 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
PVT1-213ENST00000522414 TLL1O43897 1013 aa11.71□□□□□ -0.53
PVT1-213ENST00000522414 POTECB2RU33 542 aa11.7□□□□□ -0.54
PVT1-213ENST00000522414 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
PVT1-213ENST00000522414 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
PVT1-213ENST00000522414 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
PVT1-213ENST00000522414 ATRNO75882 1429 aa11.69□□□□□ -0.54
PVT1-213ENST00000522414 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
PVT1-213ENST00000522414 USP32Q8NFA0 1604 aa11.69□□□□□ -0.54
PVT1-213ENST00000522414 FAM83GA6ND36 823 aa11.69□□□□□ -0.54
PVT1-213ENST00000522414 MYT1Q01538 1121 aa11.69□□□□□ -0.54
PVT1-213ENST00000522414 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
PVT1-213ENST00000522414 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
PVT1-213ENST00000522414 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
PVT1-213ENST00000522414 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
PVT1-213ENST00000522414 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
PVT1-213ENST00000522414 KIAA1210Q9ULL0 1709 aa11.67□□□□□ -0.54
PVT1-213ENST00000522414 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
PVT1-213ENST00000522414 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
PVT1-213ENST00000522414 LIAT1Q6ZQX7 453 aa11.66□□□□□ -0.54
PVT1-213ENST00000522414 NGDNQ8NEJ9 315 aaKnown RBP11.66□□□□□ -0.54
PVT1-213ENST00000522414 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
PVT1-213ENST00000522414 ARHGEF28Q8N1W1 1705 aaKnown RBP11.66□□□□□ -0.54
PVT1-213ENST00000522414 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
PVT1-213ENST00000522414 NBPF1Q3BBV0 1214 aa11.65□□□□□ -0.54
PVT1-213ENST00000522414 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
PVT1-213ENST00000522414 SBNO1A3KN83 1393 aa11.65□□□□□ -0.55
PVT1-213ENST00000522414 TRPM3Q9HCF6 1732 aaPredicted RBP11.64□□□□□ -0.55
PVT1-213ENST00000522414 TNS3Q68CZ2 1445 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 VPS72Q15906 364 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 SEPT12Q8IYM1 358 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
PVT1-213ENST00000522414 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 CDK19Q9BWU1 502 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 SLIT2O94813 1529 aa11.64□□□□□ -0.55
PVT1-213ENST00000522414 S1PR4O95977 384 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 SLC4A3P48751 1232 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 PRR20EP86478 221 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 PRR20CP86479 221 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 PRR20DP86480 221 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 PRR20BP86481 221 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 PRR20AP86496 221 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 ANKLE1Q8NAG6 615 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 RALGAPBQ86X10 1494 aa11.63□□□□□ -0.55
PVT1-213ENST00000522414 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 DGAT1O75907 488 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
PVT1-213ENST00000522414 NUTM2GQ5VZR2 741 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 ARHGEF10O15013 1369 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 GPRASP1Q5JY77 1395 aa11.62□□□□□ -0.55
PVT1-213ENST00000522414 NWD2Q9ULI1 1742 aa11.61□□□□□ -0.55
PVT1-213ENST00000522414 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
PVT1-213ENST00000522414 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 DNAJB2P25686 324 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 NBPF8Q3BBV2 869 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 PAXIP1Q6ZW49 1069 aaPredicted RBP11.6□□□□□ -0.55
PVT1-213ENST00000522414 DEFB132Q7Z7B7 95 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 TMEM134Q9H6X4 195 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
PVT1-213ENST00000522414 ITSN1Q15811 1721 aa11.6□□□□□ -0.55
PVT1-213ENST00000522414 GLI3P10071 1580 aa11.59□□□□□ -0.55
PVT1-213ENST00000522414 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
PVT1-213ENST00000522414 TNFRSF10AO00220 468 aa11.59□□□□□ -0.55
PVT1-213ENST00000522414 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
PVT1-213ENST00000522414 GDF9O60383 454 aa11.59□□□□□ -0.55
PVT1-213ENST00000522414 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
PVT1-213ENST00000522414 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
PVT1-213ENST00000522414 ATP7BP35670 1465 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 ZC3H6P61129 1189 aaKnown RBP11.58□□□□□ -0.56
PVT1-213ENST00000522414 PTGDRQ13258 359 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 CHRNA2Q15822 529 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 FAM182BQ5T319 152 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 KRT27Q7Z3Y8 459 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 ADGRG1Q9Y653 693 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 PLCH1Q4KWH8 1693 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 ACEP12821 1306 aa11.58□□□□□ -0.56
PVT1-213ENST00000522414 NEUROD1Q13562 356 aa11.57□□□□□ -0.56
PVT1-213ENST00000522414 NRAPQ86VF7 1730 aa11.57□□□□□ -0.56
PVT1-213ENST00000522414 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
PVT1-213ENST00000522414 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms