RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SMC2O95347 1197 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 DNAAF4Q8WXU2 420 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 JAKMIP1Q96N16 626 aaKnown RBP19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 C14orf93Q9H972 538 aaKnown RBP19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 NCOA1Q15788 1441 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 MKNK2Q9HBH9 465 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 EXOC6BQ9Y2D4 811 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
PCDHA3-201ENST00000522353 NSD2O96028 1365 aa19.15■□□□□ 0.66
PCDHA3-201ENST00000522353 CAVIN1Q6NZI2 390 aaKnown RBP19.15■□□□□ 0.66
PCDHA3-201ENST00000522353 UBAP1LF5GYI3 381 aa19.15■□□□□ 0.66
PCDHA3-201ENST00000522353 DHX8Q14562 1220 aaKnown RBP19.15■□□□□ 0.66
PCDHA3-201ENST00000522353 CAGE1Q8TC20 777 aa19.15■□□□□ 0.66
PCDHA3-201ENST00000522353 A0A087WZG4 1122 aa19.14■□□□□ 0.66
PCDHA3-201ENST00000522353 RNF214Q8ND24 703 aa19.14■□□□□ 0.66
PCDHA3-201ENST00000522353 BCL11BQ9C0K0 894 aaPredicted RBP19.14■□□□□ 0.66
PCDHA3-201ENST00000522353 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 NOS1P29475 1434 aa19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 PRPF40AO75400 957 aaKnown RBP19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 SSBP05455 408 aaKnown RBP eCLIP19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 BRPF1P55201 1214 aaPredicted RBP19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 HSP90B2PQ58FF3 399 aa19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 CDC5LQ99459 802 aaKnown RBP19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 TSPY26PQ9H489 355 aa19.14■□□□□ 0.65
PCDHA3-201ENST00000522353 ZNF771Q7L3S4 317 aaPredicted RBP19.13■□□□□ 0.65
PCDHA3-201ENST00000522353 NAPBQ9H115 298 aa19.13■□□□□ 0.65
PCDHA3-201ENST00000522353 CCP110O43303 1012 aa19.13■□□□□ 0.65
PCDHA3-201ENST00000522353 TNIP1Q15025 636 aa19.13■□□□□ 0.65
PCDHA3-201ENST00000522353 SEC63Q9UGP8 760 aaKnown RBP19.13■□□□□ 0.65
PCDHA3-201ENST00000522353 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
PCDHA3-201ENST00000522353 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
PCDHA3-201ENST00000522353 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
PCDHA3-201ENST00000522353 CCDC196A0A1B0GTZ2 297 aa19.12■□□□□ 0.65
PCDHA3-201ENST00000522353 MX1P20591 662 aa19.12■□□□□ 0.65
PCDHA3-201ENST00000522353 K7ELQ4 463 aaPredicted RBP19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 C6orf229H3BNL8 230 aa19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 PPP1R42Q7Z4L9 355 aa19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 TXLNBQ8N3L3 684 aa19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 ACEP12821 1306 aa19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 MINDY4BA8MYZ0 360 aa19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
PCDHA3-201ENST00000522353 LDHCP07864 332 aa19.1■□□□□ 0.65
PCDHA3-201ENST00000522353 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
PCDHA3-201ENST00000522353 PTPN23Q9H3S7 1636 aa19.1■□□□□ 0.65
PCDHA3-201ENST00000522353 SCAF11Q99590 1463 aaKnown RBP19.1■□□□□ 0.65
PCDHA3-201ENST00000522353 TANGO6Q9C0B7 1094 aa19.1■□□□□ 0.65
PCDHA3-201ENST00000522353 RFC4P35249 363 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 ZNF444Q8N0Y2 327 aaPredicted RBP19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 CCDC192P0DO97 292 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 TTLL12Q14166 644 aaPredicted RBP19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 IQCA1Q86XH1 822 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 ZBTB3Q9H5J0 574 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 CEP131Q9UPN4 1083 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 SERPINC1P01008 464 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 RNF41Q9H4P4 317 aaPredicted RBP19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 CTCFLQ8NI51 663 aaPredicted RBP19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 ERCC4Q92889 916 aaPredicted RBP19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 SSH1Q8WYL5 1049 aa19.09■□□□□ 0.65
PCDHA3-201ENST00000522353 GPTP24298 496 aa19.08■□□□□ 0.65
PCDHA3-201ENST00000522353 TNMDQ9H2S6 317 aa19.08■□□□□ 0.65
PCDHA3-201ENST00000522353 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.65
PCDHA3-201ENST00000522353 TTC21AQ8NDW8 1320 aa19.08■□□□□ 0.65
PCDHA3-201ENST00000522353 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.65
PCDHA3-201ENST00000522353 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.64
PCDHA3-201ENST00000522353 BOLA2Q9H3K6 86 aa19.08■□□□□ 0.64
PCDHA3-201ENST00000522353 UHRF1BP1LA0JNW5 1464 aa19.08■□□□□ 0.64
PCDHA3-201ENST00000522353 PPFIBP1Q86W92 1011 aa19.08■□□□□ 0.64
PCDHA3-201ENST00000522353 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
PCDHA3-201ENST00000522353 PTPRCP08575 1304 aa19.07■□□□□ 0.64
PCDHA3-201ENST00000522353 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
PCDHA3-201ENST00000522353 CWC25Q9NXE8 425 aaPredicted RBP19.07■□□□□ 0.64
PCDHA3-201ENST00000522353 TRIM21P19474 475 aaKnown RBP19.07■□□□□ 0.64
PCDHA3-201ENST00000522353 DEF6Q9H4E7 631 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 DESP17661 470 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 FLIIQ13045 1269 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 SPATA32Q96LK8 384 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 PIBF1Q8WXW3 757 aa19.06■□□□□ 0.64
PCDHA3-201ENST00000522353 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 BACH2Q9BYV9 841 aa19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 SMARCC1Q92922 1105 aaPredicted RBP19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 KDM5BQ9UGL1 1544 aa19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 HMGB1P09429 215 aaKnown RBP19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
PCDHA3-201ENST00000522353 ST5P78524 1137 aa19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 PAXIP1Q6ZW49 1069 aaPredicted RBP19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 BICRAQ9NZM4 1560 aa19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 RARSP54136 660 aaKnown RBP19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 MATR3P43243 847 aaKnown RBP eCLIP19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 TTF1Q15361 905 aaPredicted RBP19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 CCDC96Q2M329 555 aa19.04■□□□□ 0.64
PCDHA3-201ENST00000522353 ZCRB1Q8TBF4 217 aaKnown RBP19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 DNAI2Q9GZS0 605 aa19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 CIZ1Q9ULV3 898 aaPredicted RBP19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 F6X3S4 739 aa19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 BAG3O95817 575 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms