RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
TRAPPC9-212ENST00000521944 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC9-212ENST00000521944 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
TRAPPC9-212ENST00000521944 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
TRAPPC9-212ENST00000521944 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
TRAPPC9-212ENST00000521944 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
TRAPPC9-212ENST00000521944 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
TRAPPC9-212ENST00000521944 TIE1P35590 1138 aa12.94□□□□□ -0.34
TRAPPC9-212ENST00000521944 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
TRAPPC9-212ENST00000521944 USP47Q96K76 1375 aa12.94□□□□□ -0.34
TRAPPC9-212ENST00000521944 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
TRAPPC9-212ENST00000521944 C5P01031 1676 aa12.93□□□□□ -0.34
TRAPPC9-212ENST00000521944 NME9Q86XW9 330 aa12.93□□□□□ -0.34
TRAPPC9-212ENST00000521944 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
TRAPPC9-212ENST00000521944 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
TRAPPC9-212ENST00000521944 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
TRAPPC9-212ENST00000521944 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
TRAPPC9-212ENST00000521944 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
TRAPPC9-212ENST00000521944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 A0A0G2JLW4 131 aa12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 C9orf131Q5VYM1 1079 aa12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 RRAGCQ9HB90 399 aa12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 BCS1LQ9Y276 419 aa12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 LTN1O94822 1766 aa12.91□□□□□ -0.34
TRAPPC9-212ENST00000521944 MEGF6O75095 1541 aa12.9□□□□□ -0.34
TRAPPC9-212ENST00000521944 PHF14O94880 888 aa12.9□□□□□ -0.34
TRAPPC9-212ENST00000521944 IP6K1Q92551 441 aa12.9□□□□□ -0.34
TRAPPC9-212ENST00000521944 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-212ENST00000521944 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-212ENST00000521944 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-212ENST00000521944 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
TRAPPC9-212ENST00000521944 KCNA3P22001 575 aa12.89□□□□□ -0.35
TRAPPC9-212ENST00000521944 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-212ENST00000521944 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-212ENST00000521944 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
TRAPPC9-212ENST00000521944 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
TRAPPC9-212ENST00000521944 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
TRAPPC9-212ENST00000521944 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
TRAPPC9-212ENST00000521944 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
TRAPPC9-212ENST00000521944 PALLDQ8WX93 1383 aa12.88□□□□□ -0.35
TRAPPC9-212ENST00000521944 FAM208AQ9UK61 1670 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-212ENST00000521944 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
TRAPPC9-212ENST00000521944 MMP10P09238 476 aa12.87□□□□□ -0.35
TRAPPC9-212ENST00000521944 DPEP1P16444 411 aa12.87□□□□□ -0.35
TRAPPC9-212ENST00000521944 TGFB2P61812 414 aa12.87□□□□□ -0.35
TRAPPC9-212ENST00000521944 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-212ENST00000521944 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
TRAPPC9-212ENST00000521944 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
TRAPPC9-212ENST00000521944 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
TRAPPC9-212ENST00000521944 AK7Q96M32 723 aa12.86□□□□□ -0.35
TRAPPC9-212ENST00000521944 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-212ENST00000521944 FBLN1P23142 703 aa12.85□□□□□ -0.35
TRAPPC9-212ENST00000521944 SSFA2P28290 1259 aa12.85□□□□□ -0.35
TRAPPC9-212ENST00000521944 PSEN1P49768 467 aa12.85□□□□□ -0.35
TRAPPC9-212ENST00000521944 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
TRAPPC9-212ENST00000521944 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
TRAPPC9-212ENST00000521944 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 FCHSD2O94868 740 aa12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 BRCA1P38398 1863 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
TRAPPC9-212ENST00000521944 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 FOXN1O15353 648 aa12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 NBPF6Q5VWK0 638 aa12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 NBPF4Q96M43 638 aa12.83□□□□□ -0.36
TRAPPC9-212ENST00000521944 HOXC9P31274 260 aa12.82□□□□□ -0.36
TRAPPC9-212ENST00000521944 ITPK1Q13572 414 aa12.82□□□□□ -0.36
TRAPPC9-212ENST00000521944 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
TRAPPC9-212ENST00000521944 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
TRAPPC9-212ENST00000521944 MAP2P11137 1827 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-212ENST00000521944 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
TRAPPC9-212ENST00000521944 CYP27B1O15528 508 aa12.81□□□□□ -0.36
TRAPPC9-212ENST00000521944 PIGBQ92521 554 aa12.81□□□□□ -0.36
TRAPPC9-212ENST00000521944 MAP3K19Q56UN5 1328 aa12.81□□□□□ -0.36
TRAPPC9-212ENST00000521944 SBF1O95248 1867 aa12.8□□□□□ -0.36
TRAPPC9-212ENST00000521944 POTECB2RU33 542 aa12.8□□□□□ -0.36
TRAPPC9-212ENST00000521944 RGL2O15211 777 aa12.8□□□□□ -0.36
TRAPPC9-212ENST00000521944 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
TRAPPC9-212ENST00000521944 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
TRAPPC9-212ENST00000521944 ARFGEF1Q9Y6D6 1849 aa12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 GNPATO15228 680 aa12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 SIK1P57059 783 aa12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-212ENST00000521944 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-212ENST00000521944 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
TRAPPC9-212ENST00000521944 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-212ENST00000521944 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms