RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
NEFM-205ENST00000521540 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
NEFM-205ENST00000521540 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
NEFM-205ENST00000521540 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
NEFM-205ENST00000521540 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
NEFM-205ENST00000521540 KRT24Q2M2I5 525 aa16.52■□□□□ 0.23
NEFM-205ENST00000521540 JCADQ9P266 1359 aa16.51■□□□□ 0.23
NEFM-205ENST00000521540 GNAT3A8MTJ3 354 aa16.51■□□□□ 0.23
NEFM-205ENST00000521540 HOXC9P31274 260 aa16.51■□□□□ 0.23
NEFM-205ENST00000521540 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
NEFM-205ENST00000521540 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
NEFM-205ENST00000521540 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
NEFM-205ENST00000521540 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
NEFM-205ENST00000521540 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
NEFM-205ENST00000521540 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
NEFM-205ENST00000521540 CCDC30Q5VVM6 783 aa16.49■□□□□ 0.23
NEFM-205ENST00000521540 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
NEFM-205ENST00000521540 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
NEFM-205ENST00000521540 MCM4P33991 863 aa16.48■□□□□ 0.23
NEFM-205ENST00000521540 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
NEFM-205ENST00000521540 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
NEFM-205ENST00000521540 MAP3K5Q99683 1374 aa16.48■□□□□ 0.23
NEFM-205ENST00000521540 SLIT3O75094 1523 aa16.48■□□□□ 0.23
NEFM-205ENST00000521540 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
NEFM-205ENST00000521540 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
NEFM-205ENST00000521540 DDIT3P35638 169 aa16.47■□□□□ 0.23
NEFM-205ENST00000521540 MEIS3Q99687 375 aa16.47■□□□□ 0.23
NEFM-205ENST00000521540 PXDNLA1KZ92 1463 aa16.46■□□□□ 0.23
NEFM-205ENST00000521540 GNAI3P08754 354 aa16.46■□□□□ 0.23
NEFM-205ENST00000521540 PTMSP20962 102 aa16.46■□□□□ 0.23
NEFM-205ENST00000521540 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
NEFM-205ENST00000521540 KIF2CQ99661 725 aa16.46■□□□□ 0.23
NEFM-205ENST00000521540 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.22
NEFM-205ENST00000521540 GNAI2P04899 355 aa16.46■□□□□ 0.22
NEFM-205ENST00000521540 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.22
NEFM-205ENST00000521540 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.22
NEFM-205ENST00000521540 LTN1O94822 1766 aa16.46■□□□□ 0.22
NEFM-205ENST00000521540 NFAT5O94916 1531 aa16.45■□□□□ 0.22
NEFM-205ENST00000521540 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
NEFM-205ENST00000521540 SPATA31A6Q5VVP1 1343 aa16.44■□□□□ 0.22
NEFM-205ENST00000521540 RABEP1Q15276 862 aa16.44■□□□□ 0.22
NEFM-205ENST00000521540 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
NEFM-205ENST00000521540 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
NEFM-205ENST00000521540 KCNH5Q8NCM2 988 aa16.44■□□□□ 0.22
NEFM-205ENST00000521540 IP6K1Q92551 441 aa16.44■□□□□ 0.22
NEFM-205ENST00000521540 FLIIQ13045 1269 aa16.43■□□□□ 0.22
NEFM-205ENST00000521540 G2E3Q7L622 706 aa16.43■□□□□ 0.22
NEFM-205ENST00000521540 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
NEFM-205ENST00000521540 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
NEFM-205ENST00000521540 LRP6O75581 1613 aa16.42■□□□□ 0.22
NEFM-205ENST00000521540 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
NEFM-205ENST00000521540 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
NEFM-205ENST00000521540 GBP4Q96PP9 640 aa16.41■□□□□ 0.22
NEFM-205ENST00000521540 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
NEFM-205ENST00000521540 REC8O95072 547 aa16.4■□□□□ 0.22
NEFM-205ENST00000521540 GCP02774 474 aa16.4■□□□□ 0.22
NEFM-205ENST00000521540 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
NEFM-205ENST00000521540 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
NEFM-205ENST00000521540 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
NEFM-205ENST00000521540 F6X3S4 739 aa16.39■□□□□ 0.22
NEFM-205ENST00000521540 HOXB7P09629 217 aa16.39■□□□□ 0.22
NEFM-205ENST00000521540 SDSP20132 328 aa16.39■□□□□ 0.22
NEFM-205ENST00000521540 ATP8B2P98198 1209 aa16.39■□□□□ 0.22
NEFM-205ENST00000521540 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
NEFM-205ENST00000521540 CEMIPQ8WUJ3 1361 aa16.39■□□□□ 0.21
NEFM-205ENST00000521540 TRAK2O60296 914 aa16.38■□□□□ 0.21
NEFM-205ENST00000521540 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
NEFM-205ENST00000521540 CPDO75976 1380 aa16.38■□□□□ 0.21
NEFM-205ENST00000521540 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
NEFM-205ENST00000521540 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 PDE1AP54750 535 aa16.37■□□□□ 0.21
NEFM-205ENST00000521540 NUTM2AQ8IVF1 878 aaPredicted RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
NEFM-205ENST00000521540 LRRCC1Q9C099 1032 aa16.37■□□□□ 0.21
NEFM-205ENST00000521540 SRCIN1Q9C0H9 1055 aa16.37■□□□□ 0.21
NEFM-205ENST00000521540 ERC2O15083 957 aa16.36■□□□□ 0.21
NEFM-205ENST00000521540 OTUD7AQ8TE49 926 aaPredicted RBP16.36■□□□□ 0.21
NEFM-205ENST00000521540 OVOS2A0A0G2JMS6 1433 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
NEFM-205ENST00000521540 BRPF3Q9ULD4 1205 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 AOX1Q06278 1338 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 AMOTQ4VCS5 1084 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 TUBGCP6Q96RT7 1819 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 SALL3Q9BXA9 1300 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 ABCC6O95255 1503 aa16.35■□□□□ 0.21
NEFM-205ENST00000521540 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
NEFM-205ENST00000521540 COL14A1Q05707 1796 aaKnown RBP16.34■□□□□ 0.21
NEFM-205ENST00000521540 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
NEFM-205ENST00000521540 ST18O60284 1047 aa16.34■□□□□ 0.21
NEFM-205ENST00000521540 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
NEFM-205ENST00000521540 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms