RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
NUDCD1-204ENST00000521439 BRD1O95696 1058 aa11.98□□□□□ -0.49
NUDCD1-204ENST00000521439 RELBQ01201 579 aa11.98□□□□□ -0.49
NUDCD1-204ENST00000521439 AGBL1Q96MI9 1066 aa11.98□□□□□ -0.49
NUDCD1-204ENST00000521439 TPCN2Q8NHX9 752 aa11.97□□□□□ -0.49
NUDCD1-204ENST00000521439 ZNF775Q96BV0 537 aaPredicted RBP11.97□□□□□ -0.49
NUDCD1-204ENST00000521439 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
NUDCD1-204ENST00000521439 SEC13P55735 322 aa11.96□□□□□ -0.49
NUDCD1-204ENST00000521439 FAM69CQ0P6D2 419 aa11.96□□□□□ -0.49
NUDCD1-204ENST00000521439 OSBPL3Q9H4L5 887 aa11.96□□□□□ -0.49
NUDCD1-204ENST00000521439 MAN1A2O60476 641 aa11.95□□□□□ -0.5
NUDCD1-204ENST00000521439 PTGIRP43119 386 aa11.95□□□□□ -0.5
NUDCD1-204ENST00000521439 SWI5Q1ZZU3 235 aa11.95□□□□□ -0.5
NUDCD1-204ENST00000521439 TTLL8A6PVC2 850 aa11.94□□□□□ -0.5
NUDCD1-204ENST00000521439 CYP2U1Q7Z449 544 aa11.94□□□□□ -0.5
NUDCD1-204ENST00000521439 SFI1A8K8P3 1242 aa11.93□□□□□ -0.5
NUDCD1-204ENST00000521439 KDF1Q8NAX2 398 aaPredicted RBP11.93□□□□□ -0.5
NUDCD1-204ENST00000521439 CLP1Q92989 425 aaKnown RBP11.93□□□□□ -0.5
NUDCD1-204ENST00000521439 ZNF395Q9H8N7 513 aaPredicted RBP11.93□□□□□ -0.5
NUDCD1-204ENST00000521439 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
NUDCD1-204ENST00000521439 INSM2Q96T92 566 aaPredicted RBP11.92□□□□□ -0.5
NUDCD1-204ENST00000521439 SOBPA7XYQ1 873 aa11.91□□□□□ -0.5
NUDCD1-204ENST00000521439 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
NUDCD1-204ENST00000521439 KCNA1Q09470 495 aa11.91□□□□□ -0.5
NUDCD1-204ENST00000521439 POLMQ9NP87 494 aaPredicted RBP11.91□□□□□ -0.5
NUDCD1-204ENST00000521439 DNMT3LQ9UJW3 386 aa11.91□□□□□ -0.5
NUDCD1-204ENST00000521439 M0R2N6 131 aa11.89□□□□□ -0.51
NUDCD1-204ENST00000521439 CTSOP43234 321 aaPredicted RBP11.89□□□□□ -0.51
NUDCD1-204ENST00000521439 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.89□□□□□ -0.51
NUDCD1-204ENST00000521439 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
NUDCD1-204ENST00000521439 SLAIN2Q9P270 581 aa11.89□□□□□ -0.51
NUDCD1-204ENST00000521439 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
NUDCD1-204ENST00000521439 GNRH1P01148 92 aa11.88□□□□□ -0.51
NUDCD1-204ENST00000521439 SCNN1DP51172 638 aa11.88□□□□□ -0.51
NUDCD1-204ENST00000521439 ZNF358Q9NW07 568 aa11.88□□□□□ -0.51
NUDCD1-204ENST00000521439 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
NUDCD1-204ENST00000521439 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
NUDCD1-204ENST00000521439 SSFA2P28290 1259 aa11.87□□□□□ -0.51
NUDCD1-204ENST00000521439 GDF10P55107 478 aa11.87□□□□□ -0.51
NUDCD1-204ENST00000521439 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
NUDCD1-204ENST00000521439 FIGNL2A6NMB9 653 aa11.86□□□□□ -0.51
NUDCD1-204ENST00000521439 TERTO14746 1132 aaKnown RBP11.86□□□□□ -0.51
NUDCD1-204ENST00000521439 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
NUDCD1-204ENST00000521439 RNF217Q8TC41 542 aa11.86□□□□□ -0.51
NUDCD1-204ENST00000521439 HINFPQ9BQA5 517 aa11.86□□□□□ -0.51
NUDCD1-204ENST00000521439 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
NUDCD1-204ENST00000521439 A0A1W2PRU2 124 aa11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 BACH1O14867 736 aa11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 INHAP05111 366 aa11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 ATP2B4P23634 1241 aa11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 PHLDB3Q6NSJ2 640 aa11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 TSEN2Q8NCE0 465 aaKnown RBP11.85□□□□□ -0.51
NUDCD1-204ENST00000521439 MEN1O00255 615 aa11.84□□□□□ -0.51
NUDCD1-204ENST00000521439 GPC1P35052 558 aa11.84□□□□□ -0.51
NUDCD1-204ENST00000521439 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
NUDCD1-204ENST00000521439 FOXD4L5Q5VV16 416 aaPredicted RBP11.84□□□□□ -0.51
NUDCD1-204ENST00000521439 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
NUDCD1-204ENST00000521439 PRMT3O60678 531 aa11.83□□□□□ -0.52
NUDCD1-204ENST00000521439 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
NUDCD1-204ENST00000521439 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.52
NUDCD1-204ENST00000521439 CLN3Q13286 438 aa11.83□□□□□ -0.52
NUDCD1-204ENST00000521439 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
NUDCD1-204ENST00000521439 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
NUDCD1-204ENST00000521439 SLC16A10Q8TF71 515 aa11.82□□□□□ -0.52
NUDCD1-204ENST00000521439 WFS1O76024 890 aa11.81□□□□□ -0.52
NUDCD1-204ENST00000521439 OCLNQ16625 522 aa11.81□□□□□ -0.52
NUDCD1-204ENST00000521439 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
NUDCD1-204ENST00000521439 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
NUDCD1-204ENST00000521439 RAB6BQ9NRW1 208 aa11.81□□□□□ -0.52
NUDCD1-204ENST00000521439 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
NUDCD1-204ENST00000521439 LGR5O75473 907 aa11.8□□□□□ -0.52
NUDCD1-204ENST00000521439 LYSMD3Q7Z3D4 306 aa11.8□□□□□ -0.52
NUDCD1-204ENST00000521439 C1orf216Q8TAB5 229 aa11.8□□□□□ -0.52
NUDCD1-204ENST00000521439 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
NUDCD1-204ENST00000521439 CXXC1Q9P0U4 656 aaPredicted RBP11.8□□□□□ -0.52
NUDCD1-204ENST00000521439 WEE1P30291 646 aa11.79□□□□□ -0.52
NUDCD1-204ENST00000521439 PTSQ03393 145 aa11.79□□□□□ -0.52
NUDCD1-204ENST00000521439 TNS4Q8IZW8 715 aa11.79□□□□□ -0.52
NUDCD1-204ENST00000521439 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
NUDCD1-204ENST00000521439 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
NUDCD1-204ENST00000521439 IVNS1ABPQ9Y6Y0 642 aa11.79□□□□□ -0.52
NUDCD1-204ENST00000521439 H3BM21 787 aa11.78□□□□□ -0.52
NUDCD1-204ENST00000521439 IL2RAP01589 272 aa11.78□□□□□ -0.52
NUDCD1-204ENST00000521439 ARID4AP29374 1257 aaPredicted RBP11.78□□□□□ -0.52
NUDCD1-204ENST00000521439 TXNDC2Q86VQ3 553 aa11.78□□□□□ -0.52
NUDCD1-204ENST00000521439 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
NUDCD1-204ENST00000521439 GZF1Q9H116 711 aaPredicted RBP11.78□□□□□ -0.52
NUDCD1-204ENST00000521439 EPHA4P54764 986 aa11.77□□□□□ -0.53
NUDCD1-204ENST00000521439 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.53
NUDCD1-204ENST00000521439 LCE2AQ5TA79 106 aaPredicted RBP11.77□□□□□ -0.53
NUDCD1-204ENST00000521439 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
NUDCD1-204ENST00000521439 PPFIA3O75145 1194 aa11.76□□□□□ -0.53
NUDCD1-204ENST00000521439 VEGFBP49765 207 aa11.76□□□□□ -0.53
NUDCD1-204ENST00000521439 SMTNP53814 917 aa11.76□□□□□ -0.53
NUDCD1-204ENST00000521439 TAS1R3Q7RTX0 852 aa11.76□□□□□ -0.53
NUDCD1-204ENST00000521439 HRH3Q9Y5N1 445 aa11.76□□□□□ -0.53
NUDCD1-204ENST00000521439 A6NJY4 79 aa11.75□□□□□ -0.53
NUDCD1-204ENST00000521439 IGFBP4P22692 258 aa11.75□□□□□ -0.53
NUDCD1-204ENST00000521439 MTFR1Q15390 333 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms