RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 ARHGAP27Q6ZUM4 889 aa11.42□□□□□ -0.58
CSMD1-209ENST00000520630 TJP1Q07157 1748 aa11.42□□□□□ -0.58
CSMD1-209ENST00000520630 NCAPD2Q15021 1401 aa11.42□□□□□ -0.58
CSMD1-209ENST00000520630 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
CSMD1-209ENST00000520630 NRXN2Q9P2S2 1712 aa11.41□□□□□ -0.58
CSMD1-209ENST00000520630 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
CSMD1-209ENST00000520630 HSPA1AP0DMV8 641 aaKnown RBP11.41□□□□□ -0.58
CSMD1-209ENST00000520630 HSPA1BP0DMV9 641 aaKnown RBP11.41□□□□□ -0.58
CSMD1-209ENST00000520630 TGFB2P61812 414 aa11.41□□□□□ -0.58
CSMD1-209ENST00000520630 TMC1Q8TDI8 760 aa11.41□□□□□ -0.58
CSMD1-209ENST00000520630 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
CSMD1-209ENST00000520630 TNRC18O15417 2968 aaPredicted RBP11.41□□□□□ -0.58
CSMD1-209ENST00000520630 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
CSMD1-209ENST00000520630 SIK1P57059 783 aa11.4□□□□□ -0.58
CSMD1-209ENST00000520630 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
CSMD1-209ENST00000520630 RTL1A6NKG5 1358 aa11.4□□□□□ -0.59
CSMD1-209ENST00000520630 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 AMPHP49418 695 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
CSMD1-209ENST00000520630 SLC4A9Q96Q91 983 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 SIN3AQ96ST3 1273 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 ASAP1Q9ULH1 1129 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
CSMD1-209ENST00000520630 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-209ENST00000520630 GNPATO15228 680 aa11.38□□□□□ -0.59
CSMD1-209ENST00000520630 FCHSD2O94868 740 aa11.38□□□□□ -0.59
CSMD1-209ENST00000520630 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-209ENST00000520630 SMARCC1Q92922 1105 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-209ENST00000520630 DCAF5Q96JK2 942 aa11.38□□□□□ -0.59
CSMD1-209ENST00000520630 KDRP35968 1356 aa11.38□□□□□ -0.59
CSMD1-209ENST00000520630 TATP17735 454 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-209ENST00000520630 HSP90AB2PQ58FF8 381 aa11.37□□□□□ -0.59
CSMD1-209ENST00000520630 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
CSMD1-209ENST00000520630 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
CSMD1-209ENST00000520630 GYS1P13807 737 aa11.36□□□□□ -0.59
CSMD1-209ENST00000520630 COG3Q96JB2 828 aa11.36□□□□□ -0.59
CSMD1-209ENST00000520630 INSRP06213 1382 aa11.36□□□□□ -0.59
CSMD1-209ENST00000520630 POTECB2RU33 542 aa11.35□□□□□ -0.59
CSMD1-209ENST00000520630 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
CSMD1-209ENST00000520630 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
CSMD1-209ENST00000520630 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
CSMD1-209ENST00000520630 TERF2IPQ9NYB0 399 aa11.35□□□□□ -0.59
CSMD1-209ENST00000520630 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
CSMD1-209ENST00000520630 FYB1O15117 783 aa11.34□□□□□ -0.59
CSMD1-209ENST00000520630 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
CSMD1-209ENST00000520630 SMC1BQ8NDV3 1235 aa11.34□□□□□ -0.59
CSMD1-209ENST00000520630 RNF181Q9P0P0 153 aa11.34□□□□□ -0.59
CSMD1-209ENST00000520630 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
CSMD1-209ENST00000520630 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.59
CSMD1-209ENST00000520630 TMF1P82094 1093 aa11.33□□□□□ -0.6
CSMD1-209ENST00000520630 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
CSMD1-209ENST00000520630 PUS7Q96PZ0 661 aaKnown RBP11.33□□□□□ -0.6
CSMD1-209ENST00000520630 TESK2Q96S53 571 aa11.33□□□□□ -0.6
CSMD1-209ENST00000520630 SCN4AP35499 1836 aa11.32□□□□□ -0.6
CSMD1-209ENST00000520630 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
CSMD1-209ENST00000520630 CHRNA5P30532 468 aa11.32□□□□□ -0.6
CSMD1-209ENST00000520630 DDR1Q08345 913 aa11.32□□□□□ -0.6
CSMD1-209ENST00000520630 GGNBP2Q9H3C7 697 aa11.32□□□□□ -0.6
CSMD1-209ENST00000520630 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
CSMD1-209ENST00000520630 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
CSMD1-209ENST00000520630 RASSF7Q02833 373 aa11.31□□□□□ -0.6
CSMD1-209ENST00000520630 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
CSMD1-209ENST00000520630 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
CSMD1-209ENST00000520630 SMG6Q86US8 1419 aaKnown RBP11.31□□□□□ -0.6
CSMD1-209ENST00000520630 FLT4P35916 1363 aa11.3□□□□□ -0.6
CSMD1-209ENST00000520630 FOXN1O15353 648 aa11.3□□□□□ -0.6
CSMD1-209ENST00000520630 ADAMTSL1Q8N6G6 1762 aa11.3□□□□□ -0.6
CSMD1-209ENST00000520630 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
CSMD1-209ENST00000520630 TONSLQ96HA7 1378 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 GLTPD2A6NH11 291 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 FKBP8Q14318 412 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
CSMD1-209ENST00000520630 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
CSMD1-209ENST00000520630 TMOD3Q9NYL9 352 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
CSMD1-209ENST00000520630 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
CSMD1-209ENST00000520630 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
CSMD1-209ENST00000520630 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
CSMD1-209ENST00000520630 PHKG2P15735 406 aa11.28□□□□□ -0.6
CSMD1-209ENST00000520630 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
CSMD1-209ENST00000520630 EMILIN1Q9Y6C2 1016 aa11.28□□□□□ -0.6
CSMD1-209ENST00000520630 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
CSMD1-209ENST00000520630 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-209ENST00000520630 ADRA2BP18089 450 aa11.27□□□□□ -0.61
CSMD1-209ENST00000520630 TM4SF1P30408 202 aa11.27□□□□□ -0.61
CSMD1-209ENST00000520630 PDE4DIPQ5VU43 2346 aa11.26□□□□□ -0.61
CSMD1-209ENST00000520630 UBR2Q8IWV8 1755 aa11.26□□□□□ -0.61
CSMD1-209ENST00000520630 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
CSMD1-209ENST00000520630 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
CSMD1-209ENST00000520630 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
CSMD1-209ENST00000520630 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
CSMD1-209ENST00000520630 EYA1Q99502 592 aa11.26□□□□□ -0.61
CSMD1-209ENST00000520630 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
CSMD1-209ENST00000520630 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
CSMD1-209ENST00000520630 THSD7BQ9C0I4 1608 aa11.25□□□□□ -0.61
CSMD1-209ENST00000520630 NFKBIEO00221 500 aa11.25□□□□□ -0.61
CSMD1-209ENST00000520630 RFC4P35249 363 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms