RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTNNA1-220ENST00000520260 IFNL2Q8IZJ0 200 aa7.44□□□□□ -1.22
CTNNA1-220ENST00000520260 RTF1Q92541 710 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-220ENST00000520260 FCHSD2O94868 740 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 CALD1Q05682 793 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 NBPF14Q5TI25 921 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 SULT6B1Q6IMI4 303 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 CHMP4AQ9BY43 222 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 WNK3Q9BYP7 1800 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 DISP2A7MBM2 1401 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 NCAPD2Q15021 1401 aa7.43□□□□□ -1.22
CTNNA1-220ENST00000520260 LRRC37A3O60309 1634 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 RGPD1P0DJD0 1748 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 DDX54Q8TDD1 881 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 DCAF5Q96JK2 942 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 EYA1Q99502 592 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 BCL11BQ9C0K0 894 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 COLQQ9Y215 455 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 KDRP35968 1356 aa7.42□□□□□ -1.22
CTNNA1-220ENST00000520260 IL13P35225 146 aa7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 AKAP4Q5JQC9 854 aa7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 ZNF530Q6P9A1 599 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 SYTL4Q96C24 671 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 PRKRIP1Q9H875 184 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 TMOD3Q9NYL9 352 aa7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 RGPD5Q99666 1765 aa7.41□□□□□ -1.22
CTNNA1-220ENST00000520260 ERVV-2B6SEH9 535 aa7.4□□□□□ -1.22
CTNNA1-220ENST00000520260 HTATSF1O43719 755 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-220ENST00000520260 APBA3O96018 575 aa7.4□□□□□ -1.22
CTNNA1-220ENST00000520260 NPM2Q86SE8 214 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-220ENST00000520260 NGEFQ8N5V2 710 aa7.4□□□□□ -1.22
CTNNA1-220ENST00000520260 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.22
CTNNA1-220ENST00000520260 PEAK1Q9H792 1746 aa7.4□□□□□ -1.23
CTNNA1-220ENST00000520260 GNAT3A8MTJ3 354 aa7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 CABP4P57796 275 aa7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 TEFQ10587 303 aa7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 SLC27A3Q5K4L6 730 aa7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 TTC5Q8N0Z6 440 aa7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 SLAIN1Q8ND83 568 aa7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 PNISRQ8TF01 805 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 UPF1Q92900 1129 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 BMP2KQ9NSY1 1161 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-220ENST00000520260 MEGF6O75095 1541 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 MAP3K5Q99683 1374 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 PLSCR1O15162 318 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 TRIM37O94972 964 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 HMOX1P09601 288 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 FBLN1P23142 703 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 PRKAR2BP31323 418 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 MRS2Q9HD23 443 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 PKD1L3Q7Z443 1732 aa7.38□□□□□ -1.23
CTNNA1-220ENST00000520260 CCER2I3L3R5 266 aa7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 PHKG2P15735 406 aa7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 MNX1P50219 401 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 NKX1-1Q15270 411 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 MARCH10Q8NA82 808 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 RGPD3A6NKT7 1758 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 RGPD4Q7Z3J3 1758 aa7.37□□□□□ -1.23
CTNNA1-220ENST00000520260 COL3A1P02461 1466 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 NHSQ6T4R5 1651 aa7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 FLAD1Q8NFF5 587 aa7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 RUNDC1Q96C34 613 aa7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 STK32BQ9NY57 414 aa7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 TRPC6Q9Y210 931 aa7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 BRWD3Q6RI45 1802 aa7.36□□□□□ -1.23
CTNNA1-220ENST00000520260 NEFLP07196 543 aa7.35□□□□□ -1.23
CTNNA1-220ENST00000520260 MPRIPQ6WCQ1 1025 aa7.35□□□□□ -1.23
CTNNA1-220ENST00000520260 TMEM121BQ9BXQ6 578 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-220ENST00000520260 TEX13AQ9BXU3 409 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-220ENST00000520260 RSPH6AQ9H0K4 717 aa7.35□□□□□ -1.23
CTNNA1-220ENST00000520260 FANCIQ9NVI1 1328 aa7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 PRIM1P49642 420 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 FKBP8Q14318 412 aa7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 BABAM1Q9NWV8 329 aa7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 CCNL1Q9UK58 526 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-220ENST00000520260 PALLDQ8WX93 1383 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 CYP27B1O15528 508 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 SEC24BO95487 1268 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 STARD3NLO95772 234 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 AEBP1Q8IUX7 1158 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 MARVELD3Q96A59 401 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 AK7Q96M32 723 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
CTNNA1-220ENST00000520260 DOT1LQ8TEK3 1739 aa7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 TXNRD1Q16881 649 aa7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 MTHFSDQ2M296 383 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 FAM182BQ5T319 152 aa7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 VSIG10Q8N0Z9 540 aa7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 RGPD2P0DJD1 1756 aa7.32□□□□□ -1.24
CTNNA1-220ENST00000520260 BTBD11A6QL63 1104 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 RNMTO43148 476 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 RIPK4P57078 832 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 EN1Q05925 392 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms