RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
VPS37A-206ENST00000520140 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
VPS37A-206ENST00000520140 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
VPS37A-206ENST00000520140 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
VPS37A-206ENST00000520140 NHSQ6T4R5 1651 aa18.58■□□□□ 0.57
VPS37A-206ENST00000520140 BTBD11A6QL63 1104 aa18.58■□□□□ 0.57
VPS37A-206ENST00000520140 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.57
VPS37A-206ENST00000520140 ZNF521Q96K83 1311 aa18.58■□□□□ 0.56
VPS37A-206ENST00000520140 BTAF1O14981 1849 aa18.58■□□□□ 0.56
VPS37A-206ENST00000520140 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
VPS37A-206ENST00000520140 BCL9O00512 1426 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 MRC1P22897 1456 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 KCNQ3O43525 872 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
VPS37A-206ENST00000520140 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
VPS37A-206ENST00000520140 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
VPS37A-206ENST00000520140 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 WDR63Q8IWG1 891 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 PTCD1O75127 700 aaKnown RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
VPS37A-206ENST00000520140 GNAI1P63096 354 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 ZNF790Q6PG37 636 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 CHL1O00533 1208 aa18.52■□□□□ 0.56
VPS37A-206ENST00000520140 APBA3O96018 575 aa18.52■□□□□ 0.56
VPS37A-206ENST00000520140 ZNF853P0CG23 659 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 KCNQ4P56696 695 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 KRT24Q2M2I5 525 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.55
VPS37A-206ENST00000520140 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
VPS37A-206ENST00000520140 PALLDQ8WX93 1383 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 IL16Q14005 1332 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
VPS37A-206ENST00000520140 ZNF496Q96IT1 587 aaPredicted RBP18.5■□□□□ 0.55
VPS37A-206ENST00000520140 PAPPAQ13219 1627 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 SLFN5Q08AF3 891 aa18.49■□□□□ 0.55
VPS37A-206ENST00000520140 E9PSI1 815 aa18.49■□□□□ 0.55
VPS37A-206ENST00000520140 PRAMEF22A3QJZ6 481 aa18.48■□□□□ 0.55
VPS37A-206ENST00000520140 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
VPS37A-206ENST00000520140 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
VPS37A-206ENST00000520140 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
VPS37A-206ENST00000520140 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
VPS37A-206ENST00000520140 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
VPS37A-206ENST00000520140 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
VPS37A-206ENST00000520140 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
VPS37A-206ENST00000520140 EN1Q05925 392 aaPredicted RBP18.46■□□□□ 0.55
VPS37A-206ENST00000520140 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
VPS37A-206ENST00000520140 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
VPS37A-206ENST00000520140 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
VPS37A-206ENST00000520140 LOC102724428A0A0B4J2F2 783 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 SIK1P57059 783 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 TSPYL6Q8N831 410 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 C8orf58Q8NAV2 365 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
VPS37A-206ENST00000520140 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
VPS37A-206ENST00000520140 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
VPS37A-206ENST00000520140 LY75O60449 1722 aa18.44■□□□□ 0.54
VPS37A-206ENST00000520140 C5P01031 1676 aa18.43■□□□□ 0.54
VPS37A-206ENST00000520140 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
VPS37A-206ENST00000520140 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
VPS37A-206ENST00000520140 EZH2Q15910 746 aaKnown RBP18.43■□□□□ 0.54
VPS37A-206ENST00000520140 TRMT2AQ8IZ69 625 aaKnown RBP18.43■□□□□ 0.54
VPS37A-206ENST00000520140 PROM2Q8N271 834 aa18.42■□□□□ 0.54
VPS37A-206ENST00000520140 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
VPS37A-206ENST00000520140 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
VPS37A-206ENST00000520140 ITPK1Q13572 414 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 LRRC4BQ9NT99 713 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 PLSCR1O15162 318 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 BAG6P46379 1132 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
VPS37A-206ENST00000520140 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
VPS37A-206ENST00000520140 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
VPS37A-206ENST00000520140 TJP1Q07157 1748 aa18.4■□□□□ 0.54
VPS37A-206ENST00000520140 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
VPS37A-206ENST00000520140 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
VPS37A-206ENST00000520140 CAMKK2Q96RR4 588 aa18.38■□□□□ 0.53
VPS37A-206ENST00000520140 TAF1LQ8IZX4 1826 aa18.37■□□□□ 0.53
VPS37A-206ENST00000520140 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
VPS37A-206ENST00000520140 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
VPS37A-206ENST00000520140 VAMP4O75379 141 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 A1BGP04217 495 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 ANXA1P04083 346 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms