RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 ATG3Q9NT62 314 aa22.74■■□□□ 1.23
CLK4-204ENST00000520126 LRRC4BQ9NT99 713 aa22.74■■□□□ 1.23
CLK4-204ENST00000520126 STK32BQ9NY57 414 aa22.74■■□□□ 1.23
CLK4-204ENST00000520126 DCTN1Q14203 1278 aa22.73■■□□□ 1.23
CLK4-204ENST00000520126 NEUROD2Q15784 382 aa22.73■■□□□ 1.23
CLK4-204ENST00000520126 SLC27A3Q5K4L6 730 aa22.73■■□□□ 1.23
CLK4-204ENST00000520126 MCM10Q7L590 875 aa22.73■■□□□ 1.23
CLK4-204ENST00000520126 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
CLK4-204ENST00000520126 NFE2L2Q16236 605 aa22.72■■□□□ 1.23
CLK4-204ENST00000520126 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
CLK4-204ENST00000520126 ANO8Q9HCE9 1232 aaPredicted RBP22.71■■□□□ 1.23
CLK4-204ENST00000520126 RRP7AQ9Y3A4 280 aaKnown RBP22.71■■□□□ 1.23
CLK4-204ENST00000520126 RREB1Q92766 1687 aa22.71■■□□□ 1.23
CLK4-204ENST00000520126 NUP188Q5SRE5 1749 aa22.7■■□□□ 1.22
CLK4-204ENST00000520126 SLC39A6Q13433 755 aa22.7■■□□□ 1.22
CLK4-204ENST00000520126 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
CLK4-204ENST00000520126 RGPD3A6NKT7 1758 aaPredicted RBP22.69■■□□□ 1.22
CLK4-204ENST00000520126 RGPD4Q7Z3J3 1758 aa22.69■■□□□ 1.22
CLK4-204ENST00000520126 LOC102724428A0A0B4J2F2 783 aa22.69■■□□□ 1.22
CLK4-204ENST00000520126 ATP6V1AP38606 617 aa22.69■■□□□ 1.22
CLK4-204ENST00000520126 SIK1P57059 783 aa22.69■■□□□ 1.22
CLK4-204ENST00000520126 RIPK4P57078 832 aa22.69■■□□□ 1.22
CLK4-204ENST00000520126 SCN11AQ9UI33 1791 aa22.69■■□□□ 1.22
CLK4-204ENST00000520126 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
CLK4-204ENST00000520126 SLC15A2Q16348 729 aa22.67■■□□□ 1.22
CLK4-204ENST00000520126 TTC5Q8N0Z6 440 aa22.67■■□□□ 1.22
CLK4-204ENST00000520126 SENP3-EIF4A1A0A087X0R7 540 aa22.66■■□□□ 1.22
CLK4-204ENST00000520126 HTATSF1O43719 755 aaKnown RBP22.65■■□□□ 1.22
CLK4-204ENST00000520126 TMPOP42166 694 aaKnown RBP22.65■■□□□ 1.22
CLK4-204ENST00000520126 FAM9BQ8IZU0 186 aa22.65■■□□□ 1.22
CLK4-204ENST00000520126 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
CLK4-204ENST00000520126 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
CLK4-204ENST00000520126 BTBD11A6QL63 1104 aa22.64■■□□□ 1.22
CLK4-204ENST00000520126 ZNF827Q17R98 1081 aa22.64■■□□□ 1.22
CLK4-204ENST00000520126 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
CLK4-204ENST00000520126 LY75O60449 1722 aa22.62■■□□□ 1.21
CLK4-204ENST00000520126 AK7Q96M32 723 aa22.62■■□□□ 1.21
CLK4-204ENST00000520126 VIRMAQ69YN4 1812 aaKnown RBP22.62■■□□□ 1.21
CLK4-204ENST00000520126 APAF1O14727 1248 aa22.61■■□□□ 1.21
CLK4-204ENST00000520126 ITPK1Q13572 414 aa22.61■■□□□ 1.21
CLK4-204ENST00000520126 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
CLK4-204ENST00000520126 LMOD3Q0VAK6 560 aa22.6■■□□□ 1.21
CLK4-204ENST00000520126 LINC00116Q8NCU8 138 aa22.6■■□□□ 1.21
CLK4-204ENST00000520126 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
CLK4-204ENST00000520126 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
CLK4-204ENST00000520126 TAF7Q15545 349 aaPredicted RBP22.59■■□□□ 1.21
CLK4-204ENST00000520126 AKT1S1Q96B36 256 aa22.59■■□□□ 1.21
CLK4-204ENST00000520126 SLC4A9Q96Q91 983 aa22.59■■□□□ 1.21
CLK4-204ENST00000520126 MRC1P22897 1456 aa22.59■■□□□ 1.21
CLK4-204ENST00000520126 ZNF790Q6PG37 636 aa22.58■■□□□ 1.21
CLK4-204ENST00000520126 PDGFDQ9GZP0 370 aaPredicted RBP22.58■■□□□ 1.21
CLK4-204ENST00000520126 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
CLK4-204ENST00000520126 KCNQ3O43525 872 aa22.57■■□□□ 1.2
CLK4-204ENST00000520126 PHF14O94880 888 aa22.57■■□□□ 1.2
CLK4-204ENST00000520126 DLG5Q8TDM6 1919 aa22.57■■□□□ 1.2
CLK4-204ENST00000520126 ADAMTS7Q9UKP4 1686 aa22.57■■□□□ 1.2
CLK4-204ENST00000520126 SMIM5Q71RC9 77 aa22.57■■□□□ 1.2
CLK4-204ENST00000520126 GNPATO15228 680 aa22.56■■□□□ 1.2
CLK4-204ENST00000520126 ZBTB7AO95365 584 aa22.56■■□□□ 1.2
CLK4-204ENST00000520126 DNAJC10Q8IXB1 793 aa22.56■■□□□ 1.2
CLK4-204ENST00000520126 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
CLK4-204ENST00000520126 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
CLK4-204ENST00000520126 FMNL2Q96PY5 1086 aa22.55■■□□□ 1.2
CLK4-204ENST00000520126 C5P01031 1676 aa22.55■■□□□ 1.2
CLK4-204ENST00000520126 PAPPAQ13219 1627 aa22.54■■□□□ 1.2
CLK4-204ENST00000520126 MIER1Q8N108 512 aa22.53■■□□□ 1.2
CLK4-204ENST00000520126 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
CLK4-204ENST00000520126 TRIM35Q9UPQ4 493 aa22.53■■□□□ 1.2
CLK4-204ENST00000520126 ATF5Q9Y2D1 282 aaPredicted RBP22.53■■□□□ 1.2
CLK4-204ENST00000520126 PNPLA7Q6ZV29 1317 aa22.52■■□□□ 1.2
CLK4-204ENST00000520126 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
CLK4-204ENST00000520126 CRKLP46109 303 aaKnown RBP22.51■■□□□ 1.19
CLK4-204ENST00000520126 RTCBQ9Y3I0 505 aaKnown RBP22.51■■□□□ 1.19
CLK4-204ENST00000520126 TAF1LQ8IZX4 1826 aa22.5■■□□□ 1.19
CLK4-204ENST00000520126 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
CLK4-204ENST00000520126 KCPQ6ZWJ8 1503 aa22.49■■□□□ 1.19
CLK4-204ENST00000520126 SIPA1L3O60292 1781 aaPredicted RBP22.49■■□□□ 1.19
CLK4-204ENST00000520126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.49■■□□□ 1.19
CLK4-204ENST00000520126 VSIG10Q8N0Z9 540 aa22.49■■□□□ 1.19
CLK4-204ENST00000520126 HEG1Q9ULI3 1381 aa22.49■■□□□ 1.19
CLK4-204ENST00000520126 CCER2I3L3R5 266 aa22.48■■□□□ 1.19
CLK4-204ENST00000520126 STARD3NLO95772 234 aa22.48■■□□□ 1.19
CLK4-204ENST00000520126 FLAD1Q8NFF5 587 aa22.48■■□□□ 1.19
CLK4-204ENST00000520126 SPON1Q9HCB6 807 aa22.48■■□□□ 1.19
CLK4-204ENST00000520126 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
CLK4-204ENST00000520126 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
CLK4-204ENST00000520126 TRAPPC3LQ5T215 181 aa22.47■■□□□ 1.19
CLK4-204ENST00000520126 RC3H1Q5TC82 1133 aaKnown RBP22.47■■□□□ 1.19
CLK4-204ENST00000520126 AMIGO3Q86WK7 504 aa22.47■■□□□ 1.19
CLK4-204ENST00000520126 CCDC87Q9NVE4 849 aa22.47■■□□□ 1.19
CLK4-204ENST00000520126 CNTNAP4Q9C0A0 1308 aa22.46■■□□□ 1.19
CLK4-204ENST00000520126 PRAMEF22A3QJZ6 481 aa22.46■■□□□ 1.19
CLK4-204ENST00000520126 CYP19A1P11511 503 aaPredicted RBP22.46■■□□□ 1.19
CLK4-204ENST00000520126 MSL1Q68DK7 614 aa22.46■■□□□ 1.19
CLK4-204ENST00000520126 TEX13AQ9BXU3 409 aaPredicted RBP22.46■■□□□ 1.19
CLK4-204ENST00000520126 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
CLK4-204ENST00000520126 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
CLK4-204ENST00000520126 SSFA2P28290 1259 aa22.45■■□□□ 1.18
CLK4-204ENST00000520126 ARXQ96QS3 562 aa22.45■■□□□ 1.18
CLK4-204ENST00000520126 RPS6KA4O75676 772 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms