RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 RAB6BQ9NRW1 208 aa10.05□□□□□ -0.8
NPM1-206ENST00000519955 AXIN1O15169 862 aa10.04□□□□□ -0.8
NPM1-206ENST00000519955 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
NPM1-206ENST00000519955 SLC4A9Q96Q91 983 aa10.04□□□□□ -0.8
NPM1-206ENST00000519955 ESYT1Q9BSJ8 1104 aa10.04□□□□□ -0.8
NPM1-206ENST00000519955 STAU1O95793 577 aaKnown RBP10.03□□□□□ -0.8
NPM1-206ENST00000519955 IL2RAP01589 272 aa10.03□□□□□ -0.8
NPM1-206ENST00000519955 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
NPM1-206ENST00000519955 MRPL14Q6P1L8 145 aaKnown RBP10.03□□□□□ -0.8
NPM1-206ENST00000519955 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
NPM1-206ENST00000519955 NLRP3Q96P20 1036 aa10.03□□□□□ -0.8
NPM1-206ENST00000519955 TRAIPQ9BWF2 469 aa10.03□□□□□ -0.8
NPM1-206ENST00000519955 ZNF395Q9H8N7 513 aaPredicted RBP10.03□□□□□ -0.8
NPM1-206ENST00000519955 POTECB2RU33 542 aa10.02□□□□□ -0.81
NPM1-206ENST00000519955 MEN1O00255 615 aa10.02□□□□□ -0.81
NPM1-206ENST00000519955 SPINT1O43278 529 aa10.02□□□□□ -0.81
NPM1-206ENST00000519955 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
NPM1-206ENST00000519955 SCARF1Q14162 830 aa10.01□□□□□ -0.81
NPM1-206ENST00000519955 TSEN2Q8NCE0 465 aaKnown RBP10.01□□□□□ -0.81
NPM1-206ENST00000519955 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
NPM1-206ENST00000519955 HINFPQ9BQA5 517 aa10.01□□□□□ -0.81
NPM1-206ENST00000519955 HRH3Q9Y5N1 445 aa10.01□□□□□ -0.81
NPM1-206ENST00000519955 BMP2P12643 396 aa10□□□□□ -0.81
NPM1-206ENST00000519955 SMTNP53814 917 aa10□□□□□ -0.81
NPM1-206ENST00000519955 GPC1P35052 558 aa9.99□□□□□ -0.81
NPM1-206ENST00000519955 CENPCQ03188 943 aa9.99□□□□□ -0.81
NPM1-206ENST00000519955 MTFR1Q15390 333 aa9.99□□□□□ -0.81
NPM1-206ENST00000519955 TLR1Q15399 786 aa9.99□□□□□ -0.81
NPM1-206ENST00000519955 A6NJY4 79 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 BMP1P13497 986 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 EPHA4P54764 986 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 B4GALNT3Q6L9W6 998 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 TNS4Q8IZW8 715 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 INSM2Q96T92 566 aaPredicted RBP9.98□□□□□ -0.81
NPM1-206ENST00000519955 AAASQ9NRG9 546 aa9.98□□□□□ -0.81
NPM1-206ENST00000519955 CARNS1A5YM72 827 aa9.97□□□□□ -0.81
NPM1-206ENST00000519955 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
NPM1-206ENST00000519955 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
NPM1-206ENST00000519955 POLMQ9NP87 494 aaPredicted RBP9.97□□□□□ -0.81
NPM1-206ENST00000519955 SCHIP1Q9P0W5 487 aaPredicted RBP9.97□□□□□ -0.81
NPM1-206ENST00000519955 CDK2AP1O14519 115 aa9.96□□□□□ -0.82
NPM1-206ENST00000519955 GTF2E1P29083 439 aaPredicted RBP9.96□□□□□ -0.82
NPM1-206ENST00000519955 NBPF15Q8N660 670 aa9.96□□□□□ -0.82
NPM1-206ENST00000519955 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
NPM1-206ENST00000519955 ZSCAN10Q96SZ4 725 aaPredicted RBP9.96□□□□□ -0.82
NPM1-206ENST00000519955 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
NPM1-206ENST00000519955 CTSOP43234 321 aaPredicted RBP9.95□□□□□ -0.82
NPM1-206ENST00000519955 FOXK2Q01167 660 aa9.95□□□□□ -0.82
NPM1-206ENST00000519955 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
NPM1-206ENST00000519955 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
NPM1-206ENST00000519955 ATP13A2Q9NQ11 1180 aa9.95□□□□□ -0.82
NPM1-206ENST00000519955 BRD1O95696 1058 aa9.94□□□□□ -0.82
NPM1-206ENST00000519955 IGFBP4P22692 258 aa9.94□□□□□ -0.82
NPM1-206ENST00000519955 ATP2B4P23634 1241 aa9.94□□□□□ -0.82
NPM1-206ENST00000519955 WEE1P30291 646 aa9.94□□□□□ -0.82
NPM1-206ENST00000519955 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
NPM1-206ENST00000519955 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
NPM1-206ENST00000519955 GRIP2Q9C0E4 1043 aa9.94□□□□□ -0.82
NPM1-206ENST00000519955 TTLL8A6PVC2 850 aa9.93□□□□□ -0.82
NPM1-206ENST00000519955 PRMT3O60678 531 aa9.93□□□□□ -0.82
NPM1-206ENST00000519955 OCLNQ16625 522 aa9.93□□□□□ -0.82
NPM1-206ENST00000519955 TMEM214Q6NUQ4 689 aaKnown RBP9.93□□□□□ -0.82
NPM1-206ENST00000519955 SLC9A9Q8IVB4 645 aa9.93□□□□□ -0.82
NPM1-206ENST00000519955 ZFP42Q96MM3 310 aa9.93□□□□□ -0.82
NPM1-206ENST00000519955 TSPAN10Q9H1Z9 355 aaPredicted RBP9.93□□□□□ -0.82
NPM1-206ENST00000519955 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
NPM1-206ENST00000519955 SOS2Q07890 1332 aaPredicted RBP9.92□□□□□ -0.82
NPM1-206ENST00000519955 SSFA2P28290 1259 aa9.92□□□□□ -0.82
NPM1-206ENST00000519955 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
NPM1-206ENST00000519955 SCG3Q8WXD2 468 aaKnown RBP9.92□□□□□ -0.82
NPM1-206ENST00000519955 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
NPM1-206ENST00000519955 CXXC1Q9P0U4 656 aaPredicted RBP9.92□□□□□ -0.82
NPM1-206ENST00000519955 IQSEC3Q9UPP2 1182 aaPredicted RBP9.92□□□□□ -0.82
NPM1-206ENST00000519955 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 FOXO3O43524 673 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 LGR5O75473 907 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 STAG2Q8N3U4 1231 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 C1orf216Q8TAB5 229 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 RHBDD1Q8TEB9 315 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
NPM1-206ENST00000519955 PSMA6P60900 246 aaKnown RBP9.9□□□□□ -0.82
NPM1-206ENST00000519955 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
NPM1-206ENST00000519955 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
NPM1-206ENST00000519955 SPATA31C2B4DYI2 1134 aa9.89□□□□□ -0.83
NPM1-206ENST00000519955 PATL2C9JE40 543 aaKnown RBP9.89□□□□□ -0.83
NPM1-206ENST00000519955 C21orf2O43822 256 aa9.89□□□□□ -0.83
NPM1-206ENST00000519955 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
NPM1-206ENST00000519955 LYSMD3Q7Z3D4 306 aa9.89□□□□□ -0.83
NPM1-206ENST00000519955 SENP2Q9HC62 589 aa9.89□□□□□ -0.83
NPM1-206ENST00000519955 DACH1Q9UI36 760 aa9.89□□□□□ -0.83
NPM1-206ENST00000519955 USP3Q9Y6I4 520 aa9.89□□□□□ -0.83
NPM1-206ENST00000519955 TEAD4Q15561 434 aa9.88□□□□□ -0.83
NPM1-206ENST00000519955 TBCELQ5QJ74 424 aa9.88□□□□□ -0.83
NPM1-206ENST00000519955 PHLDB3Q6NSJ2 640 aa9.88□□□□□ -0.83
NPM1-206ENST00000519955 KIFC2Q96AC6 838 aa9.88□□□□□ -0.83
NPM1-206ENST00000519955 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms