RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.72
HMGB4-203ENST00000519684 ATP10DQ9P241 1426 aa10.52□□□□□ -0.72
HMGB4-203ENST00000519684 HMMRO75330 724 aa10.52□□□□□ -0.72
HMGB4-203ENST00000519684 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.72
HMGB4-203ENST00000519684 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.72
HMGB4-203ENST00000519684 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.72
HMGB4-203ENST00000519684 TBC1D32Q96NH3 1257 aa10.52□□□□□ -0.72
HMGB4-203ENST00000519684 MEIS3Q99687 375 aa10.52□□□□□ -0.72
HMGB4-203ENST00000519684 PXDNLA1KZ92 1463 aa10.52□□□□□ -0.73
HMGB4-203ENST00000519684 F6X3S4 739 aa10.52□□□□□ -0.73
HMGB4-203ENST00000519684 CEP85Q6P2H3 762 aa10.52□□□□□ -0.73
HMGB4-203ENST00000519684 DCTPP1Q9H773 170 aa10.52□□□□□ -0.73
HMGB4-203ENST00000519684 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
HMGB4-203ENST00000519684 HOXB7P09629 217 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 BMP2KLQ5H9B9 411 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 PXDNQ92626 1479 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 ABCC6O95255 1503 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 BTBD11A6QL63 1104 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 RNMTO43148 476 aaKnown RBP10.51□□□□□ -0.73
HMGB4-203ENST00000519684 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 MFAP1P55081 439 aaKnown RBP10.51□□□□□ -0.73
HMGB4-203ENST00000519684 MPRIPQ6WCQ1 1025 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 AXIN2Q9Y2T1 843 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 ERBB3P21860 1342 aa10.51□□□□□ -0.73
HMGB4-203ENST00000519684 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
HMGB4-203ENST00000519684 GNAI3P08754 354 aa10.5□□□□□ -0.73
HMGB4-203ENST00000519684 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
HMGB4-203ENST00000519684 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
HMGB4-203ENST00000519684 GNAI2P04899 355 aa10.5□□□□□ -0.73
HMGB4-203ENST00000519684 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
HMGB4-203ENST00000519684 NLRP2Q9NX02 1062 aa10.5□□□□□ -0.73
HMGB4-203ENST00000519684 LMTK3Q96Q04 1460 aa10.5□□□□□ -0.73
HMGB4-203ENST00000519684 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
HMGB4-203ENST00000519684 C22orf23Q9BZE7 217 aa10.49□□□□□ -0.73
HMGB4-203ENST00000519684 CRYBG1Q9Y4K1 1723 aa10.49□□□□□ -0.73
HMGB4-203ENST00000519684 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
HMGB4-203ENST00000519684 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
HMGB4-203ENST00000519684 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
HMGB4-203ENST00000519684 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-203ENST00000519684 COL18A1P39060 1754 aa10.48□□□□□ -0.73
HMGB4-203ENST00000519684 STRCQ7RTU9 1775 aa10.48□□□□□ -0.73
HMGB4-203ENST00000519684 SPATA31A3Q5VYP0 1347 aa10.48□□□□□ -0.73
HMGB4-203ENST00000519684 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
HMGB4-203ENST00000519684 ADAMTS7Q9UKP4 1686 aa10.47□□□□□ -0.73
HMGB4-203ENST00000519684 CABLES1Q8TDN4 633 aa10.46□□□□□ -0.73
HMGB4-203ENST00000519684 BCL11AQ9H165 835 aa10.46□□□□□ -0.73
HMGB4-203ENST00000519684 CHPF2Q9P2E5 772 aa10.46□□□□□ -0.73
HMGB4-203ENST00000519684 PLEKHG2Q9H7P9 1386 aa10.46□□□□□ -0.73
HMGB4-203ENST00000519684 SCN11AQ9UI33 1791 aa10.46□□□□□ -0.74
HMGB4-203ENST00000519684 APBB1O00213 710 aa10.46□□□□□ -0.74
HMGB4-203ENST00000519684 KCNQ3O43525 872 aa10.46□□□□□ -0.74
HMGB4-203ENST00000519684 CDC45O75419 566 aa10.46□□□□□ -0.74
HMGB4-203ENST00000519684 PLEKHM2Q8IWE5 1019 aa10.46□□□□□ -0.74
HMGB4-203ENST00000519684 PHAXQ9H814 394 aaKnown RBP10.46□□□□□ -0.74
HMGB4-203ENST00000519684 USP35Q9P2H5 1018 aa10.46□□□□□ -0.74
HMGB4-203ENST00000519684 CPDO75976 1380 aa10.45□□□□□ -0.74
HMGB4-203ENST00000519684 UBTFL1P0CB47 393 aaPredicted RBP10.45□□□□□ -0.74
HMGB4-203ENST00000519684 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
HMGB4-203ENST00000519684 BRINP3Q76B58 766 aa10.45□□□□□ -0.74
HMGB4-203ENST00000519684 SRCIN1Q9C0H9 1055 aa10.45□□□□□ -0.74
HMGB4-203ENST00000519684 CHRNA2Q15822 529 aa10.45□□□□□ -0.74
HMGB4-203ENST00000519684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
HMGB4-203ENST00000519684 DBF4Q9UBU7 674 aaPredicted RBP10.45□□□□□ -0.74
HMGB4-203ENST00000519684 PKD1L3Q7Z443 1732 aa10.44□□□□□ -0.74
HMGB4-203ENST00000519684 SMARCA5O60264 1052 aaPredicted RBP10.44□□□□□ -0.74
HMGB4-203ENST00000519684 ATP8B2P98198 1209 aa10.44□□□□□ -0.74
HMGB4-203ENST00000519684 CASC1Q6TDU7 716 aa10.44□□□□□ -0.74
HMGB4-203ENST00000519684 TBC1D9Q6ZT07 1266 aa10.44□□□□□ -0.74
HMGB4-203ENST00000519684 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
HMGB4-203ENST00000519684 LRRFIP2Q9Y608 721 aaKnown RBP10.44□□□□□ -0.74
HMGB4-203ENST00000519684 MEGF6O75095 1541 aa10.44□□□□□ -0.74
HMGB4-203ENST00000519684 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
HMGB4-203ENST00000519684 PHKG2P15735 406 aa10.43□□□□□ -0.74
HMGB4-203ENST00000519684 C16orf71Q8IYS4 520 aaPredicted RBP10.43□□□□□ -0.74
HMGB4-203ENST00000519684 IFNL2Q8IZJ0 200 aa10.43□□□□□ -0.74
HMGB4-203ENST00000519684 PARP4Q9UKK3 1724 aaKnown RBP10.43□□□□□ -0.74
HMGB4-203ENST00000519684 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 GSPT1P15170 499 aaKnown RBP10.42□□□□□ -0.74
HMGB4-203ENST00000519684 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
HMGB4-203ENST00000519684 USP44Q9H0E7 712 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 SLC52A2Q9HAB3 445 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 SLAIN2Q9P270 581 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 ZNF335Q9H4Z2 1342 aaPredicted RBP10.42□□□□□ -0.74
HMGB4-203ENST00000519684 PI4KAP2A4QPH2 592 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 HSP90AB1P08238 724 aaKnown RBP10.42□□□□□ -0.74
HMGB4-203ENST00000519684 PI4KAP1Q8N8J0 262 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 LRRCC1Q9C099 1032 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 HYPKQ9NX55 129 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
HMGB4-203ENST00000519684 KDM6AO15550 1401 aaPredicted RBP10.42□□□□□ -0.74
HMGB4-203ENST00000519684 HSCBQ8IWL3 235 aa10.41□□□□□ -0.74
HMGB4-203ENST00000519684 PRDM11Q9NQV5 511 aa10.41□□□□□ -0.74
HMGB4-203ENST00000519684 EXOC6BQ9Y2D4 811 aa10.41□□□□□ -0.74
HMGB4-203ENST00000519684 DDX58O95786 925 aaKnown RBP10.41□□□□□ -0.74
HMGB4-203ENST00000519684 BEND3Q5T5X7 828 aa10.41□□□□□ -0.74
HMGB4-203ENST00000519684 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
HMGB4-203ENST00000519684 DCAF5Q96JK2 942 aa10.41□□□□□ -0.74
HMGB4-203ENST00000519684 HDAC5Q9UQL6 1122 aa10.41□□□□□ -0.74
HMGB4-203ENST00000519684 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms